RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 RAB2AP61019 212 aa4.09□□□□□ -1.75
CDHR3-213ENST00000488386 GNG5P63218 68 aa4.09□□□□□ -1.75
CDHR3-213ENST00000488386 UBE2L3P68036 154 aaKnown RBP4.09□□□□□ -1.75
CDHR3-213ENST00000488386 LGALS9BQ3B8N2 356 aa4.09□□□□□ -1.75
CDHR3-213ENST00000488386 Q5BKY6 102 aa4.09□□□□□ -1.75
CDHR3-213ENST00000488386 ZFAND2AQ8N6M9 145 aa4.09□□□□□ -1.75
CDHR3-213ENST00000488386 LINC00612Q8N6U2 182 aa4.09□□□□□ -1.75
CDHR3-213ENST00000488386 C11orf72Q8NBR9 251 aa4.09□□□□□ -1.75
CDHR3-213ENST00000488386 ZNRF2Q8NHG8 242 aa4.09□□□□□ -1.75
CDHR3-213ENST00000488386 MRPL53Q96EL3 112 aaKnown RBP4.09□□□□□ -1.75
CDHR3-213ENST00000488386 FAM210BQ96KR6 192 aa4.09□□□□□ -1.75
CDHR3-213ENST00000488386 FAM19A4Q96LR4 140 aa4.09□□□□□ -1.75
CDHR3-213ENST00000488386 SGK494Q96LW2 274 aa4.09□□□□□ -1.75
CDHR3-213ENST00000488386 HYLS1Q96M11 299 aa4.09□□□□□ -1.75
CDHR3-213ENST00000488386 Q9H3A6 140 aa4.09□□□□□ -1.75
CDHR3-213ENST00000488386 MRPL16Q9NX20 251 aaKnown RBP4.09□□□□□ -1.75
CDHR3-213ENST00000488386 ZNF492Q9P255 531 aa4.09□□□□□ -1.75
CDHR3-213ENST00000488386 RNF24Q9Y225 148 aa4.09□□□□□ -1.75
CDHR3-213ENST00000488386 PKHD1P08F94 4074 aa4.09□□□□□ -1.76
CDHR3-213ENST00000488386 DNAH5Q8TE73 4624 aa4.08□□□□□ -1.76
CDHR3-213ENST00000488386 C17orf112F2Z3M2 114 aa4.08□□□□□ -1.76
CDHR3-213ENST00000488386 F6UZH7 168 aa4.08□□□□□ -1.76
CDHR3-213ENST00000488386 SLC25A5P05141 298 aaKnown RBP4.08□□□□□ -1.76
CDHR3-213ENST00000488386 PRSS2P07478 247 aa4.08□□□□□ -1.76
CDHR3-213ENST00000488386 ESRGQ1W209 222 aa4.08□□□□□ -1.76
CDHR3-213ENST00000488386 RNF212Q495C1 297 aa4.08□□□□□ -1.76
CDHR3-213ENST00000488386 TMEM78Q5T7P6 136 aa4.08□□□□□ -1.76
CDHR3-213ENST00000488386 ZNF493Q6ZR52 646 aa4.08□□□□□ -1.76
CDHR3-213ENST00000488386 SSX7Q7RTT5 188 aa4.08□□□□□ -1.76
CDHR3-213ENST00000488386 C15orf53Q8NAA6 179 aa4.08□□□□□ -1.76
CDHR3-213ENST00000488386 SCGB1C1Q8TD33 95 aa4.08□□□□□ -1.76
CDHR3-213ENST00000488386 GNPNAT1Q96EK6 184 aaPredicted RBP4.08□□□□□ -1.76
CDHR3-213ENST00000488386 VSIG2Q96IQ7 327 aa4.08□□□□□ -1.76
CDHR3-213ENST00000488386 ODF3Q96PU9 254 aa4.08□□□□□ -1.76
CDHR3-213ENST00000488386 C20orf144Q9BQM9 153 aa4.08□□□□□ -1.76
CDHR3-213ENST00000488386 PYGO2Q9BRQ0 406 aa4.08□□□□□ -1.76
CDHR3-213ENST00000488386 MRPL32Q9BYC8 188 aaKnown RBP4.08□□□□□ -1.76
CDHR3-213ENST00000488386 KRTAP1-5Q9BYS1 174 aa4.08□□□□□ -1.76
CDHR3-213ENST00000488386 LRP1BQ9NZR2 4599 aa4.08□□□□□ -1.76
CDHR3-213ENST00000488386 NAGKQ9UJ70 344 aa4.08□□□□□ -1.76
CDHR3-213ENST00000488386 TRGV2A0A075B6R0 118 aa4.07□□□□□ -1.76
CDHR3-213ENST00000488386 IGHV1OR15-1A0A075B7D0 117 aa4.07□□□□□ -1.76
CDHR3-213ENST00000488386 TRAV8-1A0A0A6YYK1 113 aa4.07□□□□□ -1.76
CDHR3-213ENST00000488386 NBDYA0A0U1RRE5 68 aa4.07□□□□□ -1.76
CDHR3-213ENST00000488386 IFNA5P01569 189 aa4.07□□□□□ -1.76
CDHR3-213ENST00000488386 SFTA3P0C7M3 94 aa4.07□□□□□ -1.76
CDHR3-213ENST00000488386 CRISP2P16562 243 aa4.07□□□□□ -1.76
CDHR3-213ENST00000488386 CCL18P55774 89 aa4.07□□□□□ -1.76
CDHR3-213ENST00000488386 CYCSP99999 105 aaKnown RBP4.07□□□□□ -1.76
CDHR3-213ENST00000488386 PDE6HQ13956 83 aa4.07□□□□□ -1.76
CDHR3-213ENST00000488386 C1orf134Q5TEV5 83 aa4.07□□□□□ -1.76
CDHR3-213ENST00000488386 LINC00336Q6ZUF6 198 aa4.07□□□□□ -1.76
CDHR3-213ENST00000488386 EIF4E3Q8N5X7 224 aaKnown RBP4.07□□□□□ -1.76
CDHR3-213ENST00000488386 HSD17B11Q8NBQ5 300 aa4.07□□□□□ -1.76
CDHR3-213ENST00000488386 LINC00477Q96M19 166 aa4.07□□□□□ -1.76
CDHR3-213ENST00000488386 SH3BGRL3Q9H299 93 aa4.07□□□□□ -1.76
CDHR3-213ENST00000488386 MDFICQ9P1T7 246 aa4.07□□□□□ -1.76
CDHR3-213ENST00000488386 PRELID1Q9Y255 219 aa4.07□□□□□ -1.76
CDHR3-213ENST00000488386 PGPA6NDG6 321 aa4.06□□□□□ -1.76
CDHR3-213ENST00000488386 GNRH2O43555 120 aa4.06□□□□□ -1.76
CDHR3-213ENST00000488386 SPINK4O60575 86 aa4.06□□□□□ -1.76
CDHR3-213ENST00000488386 PET100P0DJ07 73 aa4.06□□□□□ -1.76
CDHR3-213ENST00000488386 M6PRP20645 277 aa4.06□□□□□ -1.76
CDHR3-213ENST00000488386 FUSP35637 526 aaKnown RBP eCLIP4.06□□□□□ -1.76
CDHR3-213ENST00000488386 ZNF138P52744 262 aa4.06□□□□□ -1.76
CDHR3-213ENST00000488386 TCL1AP56279 114 aa4.06□□□□□ -1.76
CDHR3-213ENST00000488386 TMEM183BQ1AE95 376 aa4.06□□□□□ -1.76
CDHR3-213ENST00000488386 KHDC3LQ587J8 217 aa4.06□□□□□ -1.76
CDHR3-213ENST00000488386 PAPPA-AS1Q5QFB9 102 aa4.06□□□□□ -1.76
CDHR3-213ENST00000488386 GOLT1AQ6ZVE7 132 aa4.06□□□□□ -1.76
CDHR3-213ENST00000488386 TMEM183AQ8IXX5 376 aa4.06□□□□□ -1.76
CDHR3-213ENST00000488386 OR10G4Q8NGN3 311 aa4.06□□□□□ -1.76
CDHR3-213ENST00000488386 OR10G9Q8NGN4 311 aa4.06□□□□□ -1.76
CDHR3-213ENST00000488386 OR10G7Q8NGN6 311 aa4.06□□□□□ -1.76
CDHR3-213ENST00000488386 RXFP4Q8TDU9 374 aa4.06□□□□□ -1.76
CDHR3-213ENST00000488386 TVP23CQ96ET8 276 aa4.06□□□□□ -1.76
CDHR3-213ENST00000488386 MED28Q9H204 178 aa4.06□□□□□ -1.76
CDHR3-213ENST00000488386 Q9H8V8 135 aa4.06□□□□□ -1.76
CDHR3-213ENST00000488386 KCNIP2Q9NS61 270 aa4.06□□□□□ -1.76
CDHR3-213ENST00000488386 ABCA13Q86UQ4 5058 aa4.06□□□□□ -1.76
CDHR3-213ENST00000488386 APOBP04114 4563 aaKnown RBP4.05□□□□□ -1.76
CDHR3-213ENST00000488386 MUC4Q99102 2169 aa4.05□□□□□ -1.76
CDHR3-213ENST00000488386 A0A1W2PPV4 95 aa4.05□□□□□ -1.76
CDHR3-213ENST00000488386 SMLR1H3BR10 107 aa4.05□□□□□ -1.76
CDHR3-213ENST00000488386 PTTG1O95997 202 aa4.05□□□□□ -1.76
CDHR3-213ENST00000488386 ARL14EPLP0DKL9 152 aa4.05□□□□□ -1.76
CDHR3-213ENST00000488386 ATP6V0CP27449 155 aa4.05□□□□□ -1.76
CDHR3-213ENST00000488386 CSN1S1P47710 185 aa4.05□□□□□ -1.76
CDHR3-213ENST00000488386 TAS2R45P59539 299 aa4.05□□□□□ -1.76
CDHR3-213ENST00000488386 DAZ2Q13117 558 aaKnown RBP4.05□□□□□ -1.76
CDHR3-213ENST00000488386 ACOT6Q3I5F7 207 aaPredicted RBP4.05□□□□□ -1.76
CDHR3-213ENST00000488386 C6orf223Q8N319 242 aa4.05□□□□□ -1.76
CDHR3-213ENST00000488386 TMEM75Q8N9X5 138 aa4.05□□□□□ -1.76
CDHR3-213ENST00000488386 ZNF680Q8NEM1 530 aa4.05□□□□□ -1.76
CDHR3-213ENST00000488386 ASB13Q8WXK3 278 aa4.05□□□□□ -1.76
CDHR3-213ENST00000488386 OTORQ9NRC9 128 aa4.05□□□□□ -1.76
CDHR3-213ENST00000488386 PCLOQ9Y6V0 5065 aa4.05□□□□□ -1.76
CDHR3-213ENST00000488386 HSPG2P98160 4391 aa4.05□□□□□ -1.76
CDHR3-213ENST00000488386 FXYD6-FXYD2A0A087WZ82 144 aa4.04□□□□□ -1.76
CDHR3-213ENST00000488386 IGHV3-16A0A0C4DH30 117 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms