RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 TPRP12270 2363 aaKnown RBP0.09□□□□□ -2.4
R3HDM1-219ENST00000488035 CPDO75976 1380 aa0.08□□□□□ -2.4
R3HDM1-219ENST00000488035 IGHV1-24A0A0C4DH33 117 aa0.08□□□□□ -2.4
R3HDM1-219ENST00000488035 A0A0G2JMM0 328 aa0.08□□□□□ -2.4
R3HDM1-219ENST00000488035 TFF1P04155 84 aa0.08□□□□□ -2.4
R3HDM1-219ENST00000488035 TCRAP04437 139 aa0.08□□□□□ -2.4
R3HDM1-219ENST00000488035 ETV6P41212 452 aa0.08□□□□□ -2.4
R3HDM1-219ENST00000488035 RHOHQ15669 191 aa0.08□□□□□ -2.4
R3HDM1-219ENST00000488035 SAMD13Q5VXD3 122 aa0.08□□□□□ -2.4
R3HDM1-219ENST00000488035 Q5XG85 94 aa0.08□□□□□ -2.4
R3HDM1-219ENST00000488035 SPINK6Q6UWN8 80 aa0.08□□□□□ -2.4
R3HDM1-219ENST00000488035 OR5A2Q8NGI9 324 aa0.08□□□□□ -2.4
R3HDM1-219ENST00000488035 RBBP6Q7Z6E9 1792 aaKnown RBP0.08□□□□□ -2.4
R3HDM1-219ENST00000488035 HELZP42694 1942 aaKnown RBP0.07□□□□□ -2.4
R3HDM1-219ENST00000488035 CKS2P33552 79 aa0.07□□□□□ -2.4
R3HDM1-219ENST00000488035 TFAMQ00059 246 aaKnown RBP0.07□□□□□ -2.4
R3HDM1-219ENST00000488035 TOMM20LQ6UXN7 152 aa0.07□□□□□ -2.4
R3HDM1-219ENST00000488035 TMEM35BQ8NCS4 154 aa0.07□□□□□ -2.4
R3HDM1-219ENST00000488035 SPRR2GQ9BYE4 73 aa0.07□□□□□ -2.4
R3HDM1-219ENST00000488035 XIRP1Q702N8 1843 aaKnown RBP0.07□□□□□ -2.4
R3HDM1-219ENST00000488035 ZCCHC6Q5VYS8 1495 aaKnown RBP0.07□□□□□ -2.4
R3HDM1-219ENST00000488035 CACNA1HO95180 2353 aa0.06□□□□□ -2.4
R3HDM1-219ENST00000488035 SPAG17Q6Q759 2223 aa0.06□□□□□ -2.4
R3HDM1-219ENST00000488035 LRP5O75197 1615 aa0.06□□□□□ -2.4
R3HDM1-219ENST00000488035 UQCRQO14949 82 aa0.06□□□□□ -2.4
R3HDM1-219ENST00000488035 S100GP29377 79 aa0.06□□□□□ -2.4
R3HDM1-219ENST00000488035 IDO2Q6ZQW0 420 aa0.06□□□□□ -2.4
R3HDM1-219ENST00000488035 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.06□□□□□ -2.4
R3HDM1-219ENST00000488035 DMAC1Q96GE9 116 aa0.06□□□□□ -2.4
R3HDM1-219ENST00000488035 NDUFAF1Q9Y375 327 aa0.06□□□□□ -2.4
R3HDM1-219ENST00000488035 KIDINS220Q9ULH0 1771 aa0.06□□□□□ -2.4
R3HDM1-219ENST00000488035 MED13LQ71F56 2210 aa0.06□□□□□ -2.4
R3HDM1-219ENST00000488035 MED23Q9ULK4 1368 aa0.06□□□□□ -2.4
R3HDM1-219ENST00000488035 WDR97A6NE52 1622 aa0.05□□□□□ -2.4
R3HDM1-219ENST00000488035 ANK2Q01484 3957 aa0.05□□□□□ -2.4
R3HDM1-219ENST00000488035 TANC1Q9C0D5 1861 aa0.05□□□□□ -2.4
R3HDM1-219ENST00000488035 RREB1Q92766 1687 aa0.05□□□□□ -2.4
R3HDM1-219ENST00000488035 SPINK1P00995 79 aa0.05□□□□□ -2.4
R3HDM1-219ENST00000488035 MT-ND4LP03901 98 aa0.05□□□□□ -2.4
R3HDM1-219ENST00000488035 CCKP06307 115 aa0.05□□□□□ -2.4
R3HDM1-219ENST00000488035 ADCYAP1P18509 176 aa0.05□□□□□ -2.4
R3HDM1-219ENST00000488035 SDC4P31431 198 aa0.05□□□□□ -2.4
R3HDM1-219ENST00000488035 PCBD1P61457 104 aa0.05□□□□□ -2.4
R3HDM1-219ENST00000488035 DDA1Q9BW61 102 aa0.05□□□□□ -2.4
R3HDM1-219ENST00000488035 ATG5Q9H1Y0 275 aa0.05□□□□□ -2.4
R3HDM1-219ENST00000488035 PTPRGP23470 1445 aa0.04□□□□□ -2.4
R3HDM1-219ENST00000488035 DLEC1Q9Y238 1755 aa0.04□□□□□ -2.4
R3HDM1-219ENST00000488035 SSPOA2VEC9 5147 aa0.04□□□□□ -2.4
R3HDM1-219ENST00000488035 TTC28Q96AY4 2481 aa0.04□□□□□ -2.4
R3HDM1-219ENST00000488035 A0A096LNT2 108 aa0.04□□□□□ -2.4
R3HDM1-219ENST00000488035 TRAV17A0A0B4J275 112 aa0.04□□□□□ -2.4
R3HDM1-219ENST00000488035 KLKP1Q107X0 134 aa0.04□□□□□ -2.4
R3HDM1-219ENST00000488035 OR4S1Q8NGB4 309 aa0.04□□□□□ -2.4
R3HDM1-219ENST00000488035 IGF2RP11717 2491 aa0.04□□□□□ -2.4
R3HDM1-219ENST00000488035 CDK12Q9NYV4 1490 aaPredicted RBP0.03□□□□□ -2.4
R3HDM1-219ENST00000488035 MPC1LP0DKB6 136 aa0.03□□□□□ -2.4
R3HDM1-219ENST00000488035 NEFHP12036 1026 aa0.03□□□□□ -2.4
R3HDM1-219ENST00000488035 LSM3P62310 102 aaKnown RBP0.03□□□□□ -2.4
R3HDM1-219ENST00000488035 HSD17B12Q53GQ0 312 aa0.03□□□□□ -2.4
R3HDM1-219ENST00000488035 UNQ5815/PRO19632Q6UWF5 114 aa0.03□□□□□ -2.4
R3HDM1-219ENST00000488035 SMIM15Q7Z3B0 74 aa0.03□□□□□ -2.4
R3HDM1-219ENST00000488035 SELENOSQ9BQE4 189 aa0.03□□□□□ -2.4
R3HDM1-219ENST00000488035 TMEM14BQ9NUH8 114 aa0.03□□□□□ -2.4
R3HDM1-219ENST00000488035 METTL1Q9UBP6 276 aaKnown RBP0.03□□□□□ -2.4
R3HDM1-219ENST00000488035 MACF1Q9UPN3 7388 aaKnown RBP0.03□□□□□ -2.4
R3HDM1-219ENST00000488035 PTPRZ1P23471 2315 aaPredicted RBP0.03□□□□□ -2.41
R3HDM1-219ENST00000488035 OVOS2A0A0G2JMS6 1433 aa0.03□□□□□ -2.41
R3HDM1-219ENST00000488035 ARHGAP31Q2M1Z3 1444 aa0.03□□□□□ -2.41
R3HDM1-219ENST00000488035 LRP1Q07954 4544 aaKnown RBP0.03□□□□□ -2.41
R3HDM1-219ENST00000488035 JMJD1CQ15652 2540 aa0.03□□□□□ -2.41
R3HDM1-219ENST00000488035 CXorf51AA0A1B0GTR3 108 aa0.02□□□□□ -2.41
R3HDM1-219ENST00000488035 A0A1B0GW64 132 aa0.02□□□□□ -2.41
R3HDM1-219ENST00000488035 C9JAW5 83 aa0.02□□□□□ -2.41
R3HDM1-219ENST00000488035 H0YJX3 145 aa0.02□□□□□ -2.41
R3HDM1-219ENST00000488035 J3KT08 172 aa0.02□□□□□ -2.41
R3HDM1-219ENST00000488035 IFITM1P13164 125 aa0.02□□□□□ -2.41
R3HDM1-219ENST00000488035 POLR2JP52435 117 aaKnown RBP0.02□□□□□ -2.41
R3HDM1-219ENST00000488035 RPS28P62857 69 aaKnown RBP0.02□□□□□ -2.41
R3HDM1-219ENST00000488035 PSPHP78330 225 aa0.02□□□□□ -2.41
R3HDM1-219ENST00000488035 TMEM244Q5VVB8 128 aa0.02□□□□□ -2.41
R3HDM1-219ENST00000488035 DNAJC15Q9Y5T4 150 aa0.02□□□□□ -2.41
R3HDM1-219ENST00000488035 ZFYVE26Q68DK2 2539 aa0.01□□□□□ -2.41
R3HDM1-219ENST00000488035 PIEZO1Q92508 2521 aa0.01□□□□□ -2.41
R3HDM1-219ENST00000488035 TRBV10-1A0A0K0K1A3 114 aa0.01□□□□□ -2.41
R3HDM1-219ENST00000488035 DPM2O94777 84 aa0.01□□□□□ -2.41
R3HDM1-219ENST00000488035 PAEPP09466 180 aa0.01□□□□□ -2.41
R3HDM1-219ENST00000488035 NBEAP1P0C6P0 100 aa0.01□□□□□ -2.41
R3HDM1-219ENST00000488035 OR8B8Q15620 311 aa0.01□□□□□ -2.41
R3HDM1-219ENST00000488035 TMEM91Q6ZNR0 172 aa0.01□□□□□ -2.41
R3HDM1-219ENST00000488035 OR8I2Q8N0Y5 310 aa0.01□□□□□ -2.41
R3HDM1-219ENST00000488035 FAM213BQ8TBF2 198 aa0.01□□□□□ -2.41
R3HDM1-219ENST00000488035 PROK2Q9HC23 129 aa0.01□□□□□ -2.41
R3HDM1-219ENST00000488035 GINS2Q9Y248 185 aa0.01□□□□□ -2.41
R3HDM1-219ENST00000488035 ABCA12Q86UK0 2595 aa0.01□□□□□ -2.41
R3HDM1-219ENST00000488035 BLMP54132 1417 aaPredicted RBP0.01□□□□□ -2.41
R3HDM1-219ENST00000488035 F5P12259 2224 aa0.01□□□□□ -2.41
R3HDM1-219ENST00000488035 TRAV36DV7A0A075B6V5 113 aa0□□□□□ -2.41
R3HDM1-219ENST00000488035 F2Z2F3 143 aa0□□□□□ -2.41
R3HDM1-219ENST00000488035 TSTD3H0UI37 97 aa0□□□□□ -2.41
R3HDM1-219ENST00000488035 KDM6BO15054 1643 aa0□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms