RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 LY6G6CO95867 125 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 OR2H2O95918 312 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 FAM107AO95990 144 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 CYB5AP00167 134 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 IFNA21P01568 189 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 RBP4P02753 201 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 IFNA4P05014 189 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 IFNA16P05015 189 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 SLC25A5P05141 298 aaKnown RBP-0.05□□□□□ -2.42
SMC4-219ENST00000487747 CD2P06729 351 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 CD14P08571 375 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 RPS17P08708 135 aaKnown RBP-0.05□□□□□ -2.42
SMC4-219ENST00000487747 RBP1P09455 135 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 SCTP09683 121 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 OR4E1P0C645 316 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 IGLC1P0CG04 106 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 SMIM17P0DL12 118 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 IGLC2P0DOY2 106 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 IGLC3P0DOY3 106 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 CXCL8P10145 99 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 IAPPP10997 89 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 PIPP12273 146 aaPredicted RBP-0.05□□□□□ -2.42
SMC4-219ENST00000487747 COX4I1P13073 169 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 IFITM1P13164 125 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 HLA-DRB4P13762 266 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 ADCYAP1P18509 176 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 HIST1H1TP22492 207 aaPredicted RBP-0.05□□□□□ -2.42
SMC4-219ENST00000487747 CBLN1P23435 193 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 KDELR1P24390 212 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 CASP1P29466 404 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 CMPK1P30085 196 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 RNASE4P34096 147 aaKnown RBP-0.05□□□□□ -2.42
SMC4-219ENST00000487747 ANP32AP39687 249 aaKnown RBP-0.05□□□□□ -2.42
SMC4-219ENST00000487747 CAPZBP47756 277 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 ATP5G3P48201 142 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 SULT1A1P50225 295 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 SERPINB9P50453 376 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 GTF2A1P52655 376 aaPredicted RBP-0.05□□□□□ -2.42
SMC4-219ENST00000487747 AP2S1P53680 142 aaPredicted RBP-0.05□□□□□ -2.42
SMC4-219ENST00000487747 TMBIM6P55061 237 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 DSCR4P56555 118 aaPredicted RBP-0.05□□□□□ -2.42
SMC4-219ENST00000487747 NDUFA6P56556 154 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 TPPP2P59282 170 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 TAS2R41P59536 307 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 MYL6P60660 151 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 MAGOHP61326 146 aaKnown RBP-0.05□□□□□ -2.42
SMC4-219ENST00000487747 RPL37AP61513 92 aaKnown RBP-0.05□□□□□ -2.42
SMC4-219ENST00000487747 SNRPGP62308 76 aaKnown RBP-0.05□□□□□ -2.42
SMC4-219ENST00000487747 LSM6P62312 80 aaKnown RBP-0.05□□□□□ -2.42
SMC4-219ENST00000487747 LCN6P62502 163 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 SELENOWP63302 87 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 PSPHP78330 225 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 MRPS36P82909 103 aaKnown RBP-0.05□□□□□ -2.42
SMC4-219ENST00000487747 MRPS15P82914 257 aaKnown RBP-0.05□□□□□ -2.42
SMC4-219ENST00000487747 SSBP1Q04837 148 aaKnown RBP-0.05□□□□□ -2.42
SMC4-219ENST00000487747 KRR1Q13601 381 aaKnown RBP-0.05□□□□□ -2.42
SMC4-219ENST00000487747 SPA17Q15506 151 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 TAF1AQ15573 450 aaPredicted RBP-0.05□□□□□ -2.42
SMC4-219ENST00000487747 OR8B8Q15620 311 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 HMGN3Q15651 99 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 IQCJQ1A5X6 159 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 RRN3P1Q2M238 152 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 DEFB109BQ30KR1 87 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 HSD17B12Q53GQ0 312 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 PYY3Q5JQD4 70 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 PSMG4Q5JS54 123 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 CLLU1Q5K131 121 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 CCDC122Q5T0U0 273 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 C10orf128Q5T292 105 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 TMEM78Q5T7P6 136 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 LELP1Q5T871 98 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 Q5VSD8 79 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 LINC01545Q5VT33 79 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 TMEM244Q5VVB8 128 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 C12orf73Q69YU5 71 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 Q6AWC8 147 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 Q6JHZ5 121 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 C8orf74Q6P047 294 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 C3orf33Q6P1S2 294 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 ENHOQ6UWT2 76 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 TOMM20LQ6UXN7 152 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 PATE2Q6UY27 113 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 HEPN1Q6WQI6 88 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 ZCCHC23Q6ZST2 131 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 VMO1Q7Z5L0 202 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 ARPINQ7Z6K5 226 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 BAGE3Q86Y29 109 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 BAGE2Q86Y30 109 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 STX12Q86Y82 276 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 WFDC13Q8IUB5 93 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 TCTE3Q8IZS6 198 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 CLECL1Q8IZS7 167 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 OR6V1Q8N148 313 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 HIST3H2BBQ8N257 126 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 KCNRGQ8N5I3 272 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 OTUD6BQ8N6M0 293 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 ACBD7Q8N6N7 88 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 TCTEX1D1Q8N7M0 179 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 Q8N8P6 123 aa-0.05□□□□□ -2.42
SMC4-219ENST00000487747 GDPD1Q8N9F7 314 aa-0.05□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms