RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 WFDC1Q9HC57 220 aa8.29□□□□□ -1.08
VPS16-208ENST00000487461 IFNA5P01569 189 aa8.28□□□□□ -1.08
VPS16-208ENST00000487461 GYPEP15421 78 aa8.28□□□□□ -1.08
VPS16-208ENST00000487461 RPL12P30050 165 aaKnown RBP8.28□□□□□ -1.08
VPS16-208ENST00000487461 TAS2R45P59539 299 aa8.28□□□□□ -1.08
VPS16-208ENST00000487461 KHDC3LQ587J8 217 aa8.28□□□□□ -1.08
VPS16-208ENST00000487461 FAM159AQ6UWV7 190 aa8.28□□□□□ -1.08
VPS16-208ENST00000487461 TMED6Q8WW62 240 aa8.28□□□□□ -1.08
VPS16-208ENST00000487461 TVP23CQ96ET8 276 aa8.28□□□□□ -1.08
VPS16-208ENST00000487461 OTORQ9NRC9 128 aa8.28□□□□□ -1.08
VPS16-208ENST00000487461 MBD2Q9UBB5 411 aa8.28□□□□□ -1.08
VPS16-208ENST00000487461 TRGV11A0A075B6L2 103 aa8.27□□□□□ -1.09
VPS16-208ENST00000487461 TRAV9-2A0A087WT02 112 aa8.27□□□□□ -1.09
VPS16-208ENST00000487461 EREGO14944 169 aa8.27□□□□□ -1.09
VPS16-208ENST00000487461 SRIP30626 198 aa8.27□□□□□ -1.09
VPS16-208ENST00000487461 ERVFC1-1P60608 527 aa8.27□□□□□ -1.09
VPS16-208ENST00000487461 TDRG1Q3Y452 100 aa8.27□□□□□ -1.09
VPS16-208ENST00000487461 NFE4Q86UQ8 179 aa8.27□□□□□ -1.09
VPS16-208ENST00000487461 WFDC10BQ8IUB3 73 aa8.27□□□□□ -1.09
VPS16-208ENST00000487461 NAGKQ9UJ70 344 aa8.27□□□□□ -1.09
VPS16-208ENST00000487461 RPH3ALQ9UNE2 315 aa8.27□□□□□ -1.09
VPS16-208ENST00000487461 LY96Q9Y6Y9 160 aa8.27□□□□□ -1.09
VPS16-208ENST00000487461 A0A087WTM6 91 aa8.26□□□□□ -1.09
VPS16-208ENST00000487461 TRAV4A0A0B4J268 109 aa8.26□□□□□ -1.09
VPS16-208ENST00000487461 IGHV3-16A0A0C4DH30 117 aa8.26□□□□□ -1.09
VPS16-208ENST00000487461 A0A0D9SG52 128 aa8.26□□□□□ -1.09
VPS16-208ENST00000487461 M0R2P5 195 aa8.26□□□□□ -1.09
VPS16-208ENST00000487461 ORM1P02763 201 aa8.26□□□□□ -1.09
VPS16-208ENST00000487461 DNAH10OSP0CZ25 163 aa8.26□□□□□ -1.09
VPS16-208ENST00000487461 XGP55808 180 aa8.26□□□□□ -1.09
VPS16-208ENST00000487461 GOLT1AQ6ZVE7 132 aa8.26□□□□□ -1.09
VPS16-208ENST00000487461 TMUB2Q71RG4 321 aa8.26□□□□□ -1.09
VPS16-208ENST00000487461 OR4C5Q8NGB2 326 aa8.26□□□□□ -1.09
VPS16-208ENST00000487461 CMTM2Q8TAZ6 248 aa8.26□□□□□ -1.09
VPS16-208ENST00000487461 TRAV8-1A0A0A6YYK1 113 aa8.25□□□□□ -1.09
VPS16-208ENST00000487461 LOC100131303A0A0U1RQF7 123 aa8.25□□□□□ -1.09
VPS16-208ENST00000487461 PET100P0DJ07 73 aa8.25□□□□□ -1.09
VPS16-208ENST00000487461 RAB2AP61019 212 aa8.25□□□□□ -1.09
VPS16-208ENST00000487461 ACOT6Q3I5F7 207 aaPredicted RBP8.25□□□□□ -1.09
VPS16-208ENST00000487461 CDPF1Q6NVV7 123 aa8.25□□□□□ -1.09
VPS16-208ENST00000487461 SLC51BQ86UW2 128 aa8.25□□□□□ -1.09
VPS16-208ENST00000487461 ARL6IP6Q8N6S5 226 aa8.25□□□□□ -1.09
VPS16-208ENST00000487461 PCNPQ8WW12 178 aaKnown RBP8.25□□□□□ -1.09
VPS16-208ENST00000487461 MSRB1Q9NZV6 116 aa8.25□□□□□ -1.09
VPS16-208ENST00000487461 TRAV21A0A0B4J279 112 aa8.24□□□□□ -1.09
VPS16-208ENST00000487461 A0A1W2PPV4 95 aa8.24□□□□□ -1.09
VPS16-208ENST00000487461 C9JCJ5 164 aa8.24□□□□□ -1.09
VPS16-208ENST00000487461 F6UZH7 168 aa8.24□□□□□ -1.09
VPS16-208ENST00000487461 K7EP13 123 aa8.24□□□□□ -1.09
VPS16-208ENST00000487461 HMGB3O15347 200 aaKnown RBP8.24□□□□□ -1.09
VPS16-208ENST00000487461 TYMSP04818 313 aa8.24□□□□□ -1.09
VPS16-208ENST00000487461 EVI2AP22794 236 aa8.24□□□□□ -1.09
VPS16-208ENST00000487461 KRTAP10-1P60331 282 aa8.24□□□□□ -1.09
VPS16-208ENST00000487461 GNG5P63218 68 aa8.24□□□□□ -1.09
VPS16-208ENST00000487461 ZNF345Q14585 488 aa8.24□□□□□ -1.09
VPS16-208ENST00000487461 FAM74A1Q5RGS3 127 aa8.24□□□□□ -1.09
VPS16-208ENST00000487461 PQLC2Q6ZP29 291 aa8.24□□□□□ -1.09
VPS16-208ENST00000487461 TXNDC17Q9BRA2 123 aa8.24□□□□□ -1.09
VPS16-208ENST00000487461 TREM1Q9NP99 234 aa8.24□□□□□ -1.09
VPS16-208ENST00000487461 EPM2AB3EWF7 344 aa8.23□□□□□ -1.09
VPS16-208ENST00000487461 KCNRGQ8N5I3 272 aa8.23□□□□□ -1.09
VPS16-208ENST00000487461 SGK494Q96LW2 274 aa8.23□□□□□ -1.09
VPS16-208ENST00000487461 SDF2L1Q9HCN8 221 aa8.23□□□□□ -1.09
VPS16-208ENST00000487461 HERC1Q15751 4861 aa8.23□□□□□ -1.09
VPS16-208ENST00000487461 CRYGDP07320 174 aa8.22□□□□□ -1.09
VPS16-208ENST00000487461 GATA1P15976 413 aaPredicted RBP8.22□□□□□ -1.09
VPS16-208ENST00000487461 OR10G9Q8NGN4 311 aa8.22□□□□□ -1.09
VPS16-208ENST00000487461 OR10G7Q8NGN6 311 aa8.22□□□□□ -1.09
VPS16-208ENST00000487461 C11orf21Q9P2W6 132 aa8.22□□□□□ -1.09
VPS16-208ENST00000487461 ARPC5O15511 151 aa8.21□□□□□ -1.1
VPS16-208ENST00000487461 ARL14EPLP0DKL9 152 aa8.21□□□□□ -1.1
VPS16-208ENST00000487461 ZNF80P51504 273 aaPredicted RBP8.21□□□□□ -1.1
VPS16-208ENST00000487461 TIRAPP58753 221 aa8.21□□□□□ -1.1
VPS16-208ENST00000487461 SH2D6Q7Z4S9 175 aa8.21□□□□□ -1.1
VPS16-208ENST00000487461 COMMD7Q86VX2 200 aa8.21□□□□□ -1.1
VPS16-208ENST00000487461 KCNS1Q96KK3 526 aa8.21□□□□□ -1.1
VPS16-208ENST00000487461 TNFSF18Q9UNG2 199 aa8.21□□□□□ -1.1
VPS16-208ENST00000487461 FXYD6-FXYD2A0A087WZ82 144 aa8.2□□□□□ -1.1
VPS16-208ENST00000487461 IGHV3-38A0A0C4DH36 116 aa8.2□□□□□ -1.1
VPS16-208ENST00000487461 RS1O15537 224 aa8.2□□□□□ -1.1
VPS16-208ENST00000487461 STAG3L2P0CL84 134 aa8.2□□□□□ -1.1
VPS16-208ENST00000487461 STAG3L3P0CL85 134 aa8.2□□□□□ -1.1
VPS16-208ENST00000487461 DPPA3Q6W0C5 159 aa8.2□□□□□ -1.1
VPS16-208ENST00000487461 C10orf126Q8N4M7 172 aa8.2□□□□□ -1.1
VPS16-208ENST00000487461 SLC25A29Q8N8R3 303 aa8.2□□□□□ -1.1
VPS16-208ENST00000487461 NHLRC2Q8NBF2 726 aa8.2□□□□□ -1.1
VPS16-208ENST00000487461 SUN5Q8TC36 379 aa8.2□□□□□ -1.1
VPS16-208ENST00000487461 IGHV3-73A0A0B4J1V6 119 aa8.19□□□□□ -1.1
VPS16-208ENST00000487461 RNF222A6NCQ9 220 aa8.19□□□□□ -1.1
VPS16-208ENST00000487461 FBLL1A6NHQ2 334 aaKnown RBP8.19□□□□□ -1.1
VPS16-208ENST00000487461 KRBOX1C9JBD0 128 aa8.19□□□□□ -1.1
VPS16-208ENST00000487461 TCRAP04437 139 aa8.19□□□□□ -1.1
VPS16-208ENST00000487461 INAFM2P0DMQ5 153 aa8.19□□□□□ -1.1
VPS16-208ENST00000487461 GCSHP23434 173 aa8.19□□□□□ -1.1
VPS16-208ENST00000487461 CDC34P49427 236 aaPredicted RBP8.19□□□□□ -1.1
VPS16-208ENST00000487461 PPT1P50897 306 aa8.19□□□□□ -1.1
VPS16-208ENST00000487461 ZNF876PQ49A33 203 aa8.19□□□□□ -1.1
VPS16-208ENST00000487461 TOR2AQ5JU69 321 aa8.19□□□□□ -1.1
VPS16-208ENST00000487461 CFAP126Q5VTH2 177 aa8.19□□□□□ -1.1
VPS16-208ENST00000487461 HSD17B11Q8NBQ5 300 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms