RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 IBA57-AS1B1ANH7 110 aa12.98□□□□□ -0.33
SMPDL3A-202ENST00000487215 PPT1P50897 306 aa12.98□□□□□ -0.33
SMPDL3A-202ENST00000487215 TIRAPP58753 221 aa12.98□□□□□ -0.33
SMPDL3A-202ENST00000487215 UBE2L3P68036 154 aaKnown RBP12.98□□□□□ -0.33
SMPDL3A-202ENST00000487215 Q6AWC8 147 aa12.98□□□□□ -0.33
SMPDL3A-202ENST00000487215 FAM159AQ6UWV7 190 aa12.98□□□□□ -0.33
SMPDL3A-202ENST00000487215 OR4C5Q8NGB2 326 aa12.98□□□□□ -0.33
SMPDL3A-202ENST00000487215 Q9HAA7 133 aa12.98□□□□□ -0.33
SMPDL3A-202ENST00000487215 LENEPQ9Y5L5 61 aa12.98□□□□□ -0.33
SMPDL3A-202ENST00000487215 HMCN2Q8NDA2 5059 aa12.97□□□□□ -0.33
SMPDL3A-202ENST00000487215 SSNA1O43805 119 aa12.97□□□□□ -0.33
SMPDL3A-202ENST00000487215 DEFA1P59665 94 aa12.97□□□□□ -0.33
SMPDL3A-202ENST00000487215 DEFA3P59666 94 aa12.97□□□□□ -0.33
SMPDL3A-202ENST00000487215 FFAR4Q5NUL3 377 aa12.97□□□□□ -0.33
SMPDL3A-202ENST00000487215 SH2D6Q7Z4S9 175 aa12.97□□□□□ -0.33
SMPDL3A-202ENST00000487215 NHLRC2Q8NBF2 726 aa12.97□□□□□ -0.33
SMPDL3A-202ENST00000487215 MARVELD1Q9BSK0 173 aa12.97□□□□□ -0.33
SMPDL3A-202ENST00000487215 HSPB11Q9Y547 144 aa12.97□□□□□ -0.33
SMPDL3A-202ENST00000487215 KRTAP29-1A8MX34 341 aaPredicted RBP12.96□□□□□ -0.33
SMPDL3A-202ENST00000487215 C1QBP02746 253 aa12.96□□□□□ -0.33
SMPDL3A-202ENST00000487215 H2BFSP57053 126 aa12.96□□□□□ -0.33
SMPDL3A-202ENST00000487215 FAM74A1Q5RGS3 127 aa12.96□□□□□ -0.33
SMPDL3A-202ENST00000487215 NAGKQ9UJ70 344 aa12.96□□□□□ -0.33
SMPDL3A-202ENST00000487215 MPC2O95563 127 aa12.95□□□□□ -0.34
SMPDL3A-202ENST00000487215 PLA2G1BP04054 148 aaKnown RBP12.95□□□□□ -0.34
SMPDL3A-202ENST00000487215 TMED6Q8WW62 240 aa12.95□□□□□ -0.34
SMPDL3A-202ENST00000487215 IGHV3-16A0A0C4DH30 117 aa12.94□□□□□ -0.34
SMPDL3A-202ENST00000487215 DIRC3C9JPN6 131 aa12.94□□□□□ -0.34
SMPDL3A-202ENST00000487215 M0R2P5 195 aa12.94□□□□□ -0.34
SMPDL3A-202ENST00000487215 GATA1P15976 413 aaPredicted RBP12.94□□□□□ -0.34
SMPDL3A-202ENST00000487215 RPL12P30050 165 aaKnown RBP12.94□□□□□ -0.34
SMPDL3A-202ENST00000487215 TDRG1Q3Y452 100 aa12.94□□□□□ -0.34
SMPDL3A-202ENST00000487215 CMTM2Q8TAZ6 248 aa12.94□□□□□ -0.34
SMPDL3A-202ENST00000487215 OTORQ9NRC9 128 aa12.94□□□□□ -0.34
SMPDL3A-202ENST00000487215 TRAV8-6A0A0B4J262 113 aa12.93□□□□□ -0.34
SMPDL3A-202ENST00000487215 GNRH2O43555 120 aa12.93□□□□□ -0.34
SMPDL3A-202ENST00000487215 Q6ZSA8 131 aa12.93□□□□□ -0.34
SMPDL3A-202ENST00000487215 LINC00528Q8N1L1 170 aa12.93□□□□□ -0.34
SMPDL3A-202ENST00000487215 ARL6IP6Q8N6S5 226 aa12.93□□□□□ -0.34
SMPDL3A-202ENST00000487215 A0A1W2PPV4 95 aa12.92□□□□□ -0.34
SMPDL3A-202ENST00000487215 IGHV3-30P01768 117 aa12.92□□□□□ -0.34
SMPDL3A-202ENST00000487215 IGHV3-33P01772 117 aa12.92□□□□□ -0.34
SMPDL3A-202ENST00000487215 IGHV3-30-3P0DP02 117 aa12.92□□□□□ -0.34
SMPDL3A-202ENST00000487215 IGHV3-30-5P0DP03 117 aa12.92□□□□□ -0.34
SMPDL3A-202ENST00000487215 IFITM3Q01628 133 aa12.92□□□□□ -0.34
SMPDL3A-202ENST00000487215 WFDC2Q14508 124 aa12.92□□□□□ -0.34
SMPDL3A-202ENST00000487215 ACOT6Q3I5F7 207 aaPredicted RBP12.92□□□□□ -0.34
SMPDL3A-202ENST00000487215 OR10J3Q5JRS4 329 aa12.92□□□□□ -0.34
SMPDL3A-202ENST00000487215 PQLC2Q6ZP29 291 aa12.92□□□□□ -0.34
SMPDL3A-202ENST00000487215 HYLS1Q96M11 299 aa12.91□□□□□ -0.34
SMPDL3A-202ENST00000487215 SMIM3Q9BZL3 60 aa12.91□□□□□ -0.34
SMPDL3A-202ENST00000487215 MBD2Q9UBB5 411 aa12.91□□□□□ -0.34
SMPDL3A-202ENST00000487215 PGPA6NDG6 321 aa12.9□□□□□ -0.34
SMPDL3A-202ENST00000487215 TYMSP04818 313 aa12.9□□□□□ -0.34
SMPDL3A-202ENST00000487215 PFN1P07737 140 aaKnown RBP12.9□□□□□ -0.34
SMPDL3A-202ENST00000487215 DEFB104AQ8WTQ1 72 aa12.9□□□□□ -0.34
SMPDL3A-202ENST00000487215 BOLA1Q9Y3E2 137 aa12.9□□□□□ -0.34
SMPDL3A-202ENST00000487215 FBLL1A6NHQ2 334 aaKnown RBP12.89□□□□□ -0.35
SMPDL3A-202ENST00000487215 A6NHS1 94 aa12.89□□□□□ -0.35
SMPDL3A-202ENST00000487215 SLC25A29Q8N8R3 303 aa12.89□□□□□ -0.35
SMPDL3A-202ENST00000487215 LRP1Q07954 4544 aaKnown RBP12.89□□□□□ -0.35
SMPDL3A-202ENST00000487215 TRAV21A0A0B4J279 112 aa12.88□□□□□ -0.35
SMPDL3A-202ENST00000487215 LAGE3Q14657 143 aa12.88□□□□□ -0.35
SMPDL3A-202ENST00000487215 LELP1Q5T871 98 aa12.88□□□□□ -0.35
SMPDL3A-202ENST00000487215 UBR4Q5T4S7 5183 aa12.87□□□□□ -0.35
SMPDL3A-202ENST00000487215 RHOHQ15669 191 aa12.87□□□□□ -0.35
SMPDL3A-202ENST00000487215 KCNS1Q96KK3 526 aa12.87□□□□□ -0.35
SMPDL3A-202ENST00000487215 PRADC1Q9BSG0 188 aa12.87□□□□□ -0.35
SMPDL3A-202ENST00000487215 TM2D2Q9BX73 214 aa12.87□□□□□ -0.35
SMPDL3A-202ENST00000487215 SDF2L1Q9HCN8 221 aa12.87□□□□□ -0.35
SMPDL3A-202ENST00000487215 RPH3ALQ9UNE2 315 aa12.87□□□□□ -0.35
SMPDL3A-202ENST00000487215 SERTM2A0A1B0GWG4 89 aa12.86□□□□□ -0.35
SMPDL3A-202ENST00000487215 F6UZH7 168 aa12.86□□□□□ -0.35
SMPDL3A-202ENST00000487215 GOLT1AQ6ZVE7 132 aa12.86□□□□□ -0.35
SMPDL3A-202ENST00000487215 TREM1Q9NP99 234 aa12.86□□□□□ -0.35
SMPDL3A-202ENST00000487215 TRBV6-4A0A1B0GX49 114 aa12.85□□□□□ -0.35
SMPDL3A-202ENST00000487215 LECT2O14960 151 aa12.85□□□□□ -0.35
SMPDL3A-202ENST00000487215 SERTAD4-AS1Q5TG53 156 aa12.85□□□□□ -0.35
SMPDL3A-202ENST00000487215 CFAP126Q5VTH2 177 aa12.85□□□□□ -0.35
SMPDL3A-202ENST00000487215 DPPA3Q6W0C5 159 aa12.85□□□□□ -0.35
SMPDL3A-202ENST00000487215 Q8N3U1 123 aa12.85□□□□□ -0.35
SMPDL3A-202ENST00000487215 OR10G9Q8NGN4 311 aa12.85□□□□□ -0.35
SMPDL3A-202ENST00000487215 OR10G7Q8NGN6 311 aa12.85□□□□□ -0.35
SMPDL3A-202ENST00000487215 TVP23CQ96ET8 276 aa12.85□□□□□ -0.35
SMPDL3A-202ENST00000487215 NDFIP1Q9BT67 221 aa12.85□□□□□ -0.35
SMPDL3A-202ENST00000487215 WFDC1Q9HC57 220 aa12.85□□□□□ -0.35
SMPDL3A-202ENST00000487215 FAT3Q8TDW7 4589 aa12.84□□□□□ -0.35
SMPDL3A-202ENST00000487215 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.84□□□□□ -0.35
SMPDL3A-202ENST00000487215 IGHV3-73A0A0B4J1V6 119 aa12.84□□□□□ -0.35
SMPDL3A-202ENST00000487215 K7EQM0 130 aa12.84□□□□□ -0.35
SMPDL3A-202ENST00000487215 RS1O15537 224 aa12.84□□□□□ -0.35
SMPDL3A-202ENST00000487215 ZNF876PQ49A33 203 aa12.84□□□□□ -0.35
SMPDL3A-202ENST00000487215 ASB13Q8WXK3 278 aa12.84□□□□□ -0.35
SMPDL3A-202ENST00000487215 GTSF1LQ9H1H1 148 aa12.84□□□□□ -0.35
SMPDL3A-202ENST00000487215 TRAV8-1A0A0A6YYK1 113 aa12.83□□□□□ -0.36
SMPDL3A-202ENST00000487215 EIF3GO75821 320 aaKnown RBP eCLIP12.83□□□□□ -0.36
SMPDL3A-202ENST00000487215 RAB2AP61019 212 aa12.83□□□□□ -0.36
SMPDL3A-202ENST00000487215 SCXQ7RTU7 201 aa12.83□□□□□ -0.36
SMPDL3A-202ENST00000487215 SYT8Q8NBV8 401 aa12.83□□□□□ -0.36
SMPDL3A-202ENST00000487215 ATP6V0E2Q8NHE4 81 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 274.8 ms