RNA–Protein interactions for RNA: ENST00000486983.1

SMARCAL1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-212ENST00000486983 COL12A1Q99715 3063 aa5.36□□□□□ -1.55
SMARCAL1-212ENST00000486983 PRSS47A8MTI9 375 aa5.35□□□□□ -1.55
SMARCAL1-212ENST00000486983 HSBP1L1C9JCN9 74 aa5.35□□□□□ -1.55
SMARCAL1-212ENST00000486983 TCF21O43680 179 aa5.35□□□□□ -1.55
SMARCAL1-212ENST00000486983 IGLL1P15814 213 aa5.35□□□□□ -1.55
SMARCAL1-212ENST00000486983 TSPOP30536 169 aa5.35□□□□□ -1.55
SMARCAL1-212ENST00000486983 CKS2P33552 79 aa5.35□□□□□ -1.55
SMARCAL1-212ENST00000486983 CACNG7P62955 275 aa5.35□□□□□ -1.55
SMARCAL1-212ENST00000486983 PSMG4Q5JS54 123 aa5.35□□□□□ -1.55
SMARCAL1-212ENST00000486983 COL5A1-AS1Q5SY13 56 aa5.35□□□□□ -1.55
SMARCAL1-212ENST00000486983 Q6ZN92 141 aa5.35□□□□□ -1.55
SMARCAL1-212ENST00000486983 GPHB5Q86YW7 130 aa5.35□□□□□ -1.55
SMARCAL1-212ENST00000486983 RNF185Q96GF1 192 aa5.35□□□□□ -1.55
SMARCAL1-212ENST00000486983 FAM19A4Q96LR4 140 aa5.35□□□□□ -1.55
SMARCAL1-212ENST00000486983 DAZ1Q9NQZ3 744 aaKnown RBP5.35□□□□□ -1.55
SMARCAL1-212ENST00000486983 ARHGAP32A7KAX9 2087 aa5.35□□□□□ -1.55
SMARCAL1-212ENST00000486983 FLNCQ14315 2725 aa5.34□□□□□ -1.55
SMARCAL1-212ENST00000486983 ABCA2Q9BZC7 2435 aa5.34□□□□□ -1.55
SMARCAL1-212ENST00000486983 A0A096LNJ9 63 aa5.34□□□□□ -1.55
SMARCAL1-212ENST00000486983 IGKV3D-20A0A0C4DH25 116 aa5.34□□□□□ -1.55
SMARCAL1-212ENST00000486983 IGHV3-66A0A0C4DH42 116 aa5.34□□□□□ -1.55
SMARCAL1-212ENST00000486983 IGHV7-4-1A0A0J9YVY3 117 aa5.34□□□□□ -1.55
SMARCAL1-212ENST00000486983 HBDP02042 147 aa5.34□□□□□ -1.55
SMARCAL1-212ENST00000486983 CSN3P07498 182 aa5.34□□□□□ -1.55
SMARCAL1-212ENST00000486983 PF4V1P10720 104 aa5.34□□□□□ -1.55
SMARCAL1-212ENST00000486983 COX6B1P14854 86 aa5.34□□□□□ -1.55
SMARCAL1-212ENST00000486983 PSMB8P28062 276 aa5.34□□□□□ -1.55
SMARCAL1-212ENST00000486983 IFI27P40305 119 aaPredicted RBP5.34□□□□□ -1.55
SMARCAL1-212ENST00000486983 KRTAP10-11P60412 298 aa5.34□□□□□ -1.55
SMARCAL1-212ENST00000486983 LOXL1Q08397 574 aaPredicted RBP5.34□□□□□ -1.55
SMARCAL1-212ENST00000486983 GAGE1Q13065 139 aa5.34□□□□□ -1.55
SMARCAL1-212ENST00000486983 LY6EQ16553 131 aa5.34□□□□□ -1.55
SMARCAL1-212ENST00000486983 LGALS9BQ3B8N2 356 aa5.34□□□□□ -1.55
SMARCAL1-212ENST00000486983 LGALS9CQ6DKI2 356 aa5.34□□□□□ -1.55
SMARCAL1-212ENST00000486983 UNQ9165/PRO28630Q6UXU0 137 aa5.34□□□□□ -1.55
SMARCAL1-212ENST00000486983 LINC00173Q6ZV60 143 aa5.34□□□□□ -1.55
SMARCAL1-212ENST00000486983 SMIM15Q7Z3B0 74 aa5.34□□□□□ -1.55
SMARCAL1-212ENST00000486983 LRRC75A-AS1Q8N1F1 130 aa5.34□□□□□ -1.55
SMARCAL1-212ENST00000486983 ZNF738Q8NE65 137 aa5.34□□□□□ -1.55
SMARCAL1-212ENST00000486983 OR4X2Q8NGF9 303 aa5.34□□□□□ -1.55
SMARCAL1-212ENST00000486983 OR10J6PQ8NGY7 276 aa5.34□□□□□ -1.55
SMARCAL1-212ENST00000486983 NTN5Q8WTR8 489 aaPredicted RBP5.34□□□□□ -1.55
SMARCAL1-212ENST00000486983 MAP1LC3AQ9H492 121 aa5.34□□□□□ -1.55
SMARCAL1-212ENST00000486983 NXT2Q9NPJ8 142 aaKnown RBP5.34□□□□□ -1.55
SMARCAL1-212ENST00000486983 TRAV21A0A0B4J279 112 aa5.33□□□□□ -1.56
SMARCAL1-212ENST00000486983 TCAPO15273 167 aa5.33□□□□□ -1.56
SMARCAL1-212ENST00000486983 ZNF207O43670 478 aaKnown RBP5.33□□□□□ -1.56
SMARCAL1-212ENST00000486983 NUDT3O95989 172 aa5.33□□□□□ -1.56
SMARCAL1-212ENST00000486983 NPYP01303 97 aa5.33□□□□□ -1.56
SMARCAL1-212ENST00000486983 TRBV12-3P01733 135 aa5.33□□□□□ -1.56
SMARCAL1-212ENST00000486983 BLCAPP62952 87 aa5.33□□□□□ -1.56
SMARCAL1-212ENST00000486983 ATOH7Q8N100 152 aa5.33□□□□□ -1.56
SMARCAL1-212ENST00000486983 ZFAND2AQ8N6M9 145 aa5.33□□□□□ -1.56
SMARCAL1-212ENST00000486983 CLUHP3Q96NS8 147 aa5.33□□□□□ -1.56
SMARCAL1-212ENST00000486983 ODF3Q96PU9 254 aa5.33□□□□□ -1.56
SMARCAL1-212ENST00000486983 PMCHL2Q9BQD1 86 aa5.33□□□□□ -1.56
SMARCAL1-212ENST00000486983 SCRT2Q9NQ03 307 aa5.33□□□□□ -1.56
SMARCAL1-212ENST00000486983 BEX4Q9NWD9 120 aaPredicted RBP5.33□□□□□ -1.56
SMARCAL1-212ENST00000486983 PEF1Q9UBV8 284 aaKnown RBP5.33□□□□□ -1.56
SMARCAL1-212ENST00000486983 LINC00527Q9UJ94 153 aa5.33□□□□□ -1.56
SMARCAL1-212ENST00000486983 UFC1Q9Y3C8 167 aa5.33□□□□□ -1.56
SMARCAL1-212ENST00000486983 NAV2Q8IVL1 2488 aa5.33□□□□□ -1.56
SMARCAL1-212ENST00000486983 SPTBN1Q01082 2364 aaKnown RBP5.32□□□□□ -1.56
SMARCAL1-212ENST00000486983 IGHV3OR16-13A0A075B7E8 117 aa5.32□□□□□ -1.56
SMARCAL1-212ENST00000486983 IGHV3-49A0A0A0MS15 119 aa5.32□□□□□ -1.56
SMARCAL1-212ENST00000486983 IGHV3-74A0A0B4J1X5 117 aa5.32□□□□□ -1.56
SMARCAL1-212ENST00000486983 TNFRSF6BO95407 300 aa5.32□□□□□ -1.56
SMARCAL1-212ENST00000486983 KRTAP10-9P60411 292 aa5.32□□□□□ -1.56
SMARCAL1-212ENST00000486983 MAJINQ3KP22 176 aa5.32□□□□□ -1.56
SMARCAL1-212ENST00000486983 FAM106AQ4KMX7 169 aa5.32□□□□□ -1.56
SMARCAL1-212ENST00000486983 SLC25A34Q6PIV7 304 aa5.32□□□□□ -1.56
SMARCAL1-212ENST00000486983 PRSS57Q6UWY2 283 aa5.32□□□□□ -1.56
SMARCAL1-212ENST00000486983 PRIMA1Q86XR5 153 aa5.32□□□□□ -1.56
SMARCAL1-212ENST00000486983 OR8A1Q8NGG7 326 aa5.32□□□□□ -1.56
SMARCAL1-212ENST00000486983 OR1N2Q8NGR9 330 aa5.32□□□□□ -1.56
SMARCAL1-212ENST00000486983 MYOZ3Q8TDC0 251 aa5.32□□□□□ -1.56
SMARCAL1-212ENST00000486983 MRAP2Q96G30 205 aa5.32□□□□□ -1.56
SMARCAL1-212ENST00000486983 RHPN1-AS1Q9BWJ2 59 aa5.32□□□□□ -1.56
SMARCAL1-212ENST00000486983 KLK15Q9H2R5 256 aa5.32□□□□□ -1.56
SMARCAL1-212ENST00000486983 SMPXQ9UHP9 88 aa5.32□□□□□ -1.56
SMARCAL1-212ENST00000486983 VPREB3Q9UKI3 123 aa5.32□□□□□ -1.56
SMARCAL1-212ENST00000486983 USP9XQ93008 2570 aaPredicted RBP5.32□□□□□ -1.56
SMARCAL1-212ENST00000486983 NBPF19A0A087WUL8 3843 aa5.32□□□□□ -1.56
SMARCAL1-212ENST00000486983 IGLV2-18A0A075B6J9 118 aa5.31□□□□□ -1.56
SMARCAL1-212ENST00000486983 K7EMI3 77 aa5.31□□□□□ -1.56
SMARCAL1-212ENST00000486983 LGALS9O00182 355 aa5.31□□□□□ -1.56
SMARCAL1-212ENST00000486983 NXPH4O95158 308 aa5.31□□□□□ -1.56
SMARCAL1-212ENST00000486983 IGHV3-11P01762 117 aa5.31□□□□□ -1.56
SMARCAL1-212ENST00000486983 ELANEP08246 267 aa5.31□□□□□ -1.56
SMARCAL1-212ENST00000486983 PRB4P10163 310 aaPredicted RBP5.31□□□□□ -1.56
SMARCAL1-212ENST00000486983 FCER1GP30273 86 aa5.31□□□□□ -1.56
SMARCAL1-212ENST00000486983 ID1P41134 155 aa5.31□□□□□ -1.56
SMARCAL1-212ENST00000486983 ASIPP42127 132 aa5.31□□□□□ -1.56
SMARCAL1-212ENST00000486983 DEFB112Q30KQ8 113 aa5.31□□□□□ -1.56
SMARCAL1-212ENST00000486983 PRR9Q5T870 116 aa5.31□□□□□ -1.56
SMARCAL1-212ENST00000486983 RNF152Q8N8N0 203 aa5.31□□□□□ -1.56
SMARCAL1-212ENST00000486983 Q8N8P6 123 aa5.31□□□□□ -1.56
SMARCAL1-212ENST00000486983 OR2K2Q8NGT1 345 aa5.31□□□□□ -1.56
SMARCAL1-212ENST00000486983 MSRB1Q9NZV6 116 aa5.31□□□□□ -1.56
SMARCAL1-212ENST00000486983 MAST4O15021 2626 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms