RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 OR4X2Q8NGF9 303 aa4.08□□□□□ -1.76
SF1-217ENST00000486960 NEUROG1Q92886 237 aa4.08□□□□□ -1.76
SF1-217ENST00000486960 HIST1H2BHQ93079 126 aa4.08□□□□□ -1.76
SF1-217ENST00000486960 LINC00526Q96FQ7 95 aa4.08□□□□□ -1.76
SF1-217ENST00000486960 C18orf15Q96N68 181 aa4.08□□□□□ -1.76
SF1-217ENST00000486960 HIST1H2BNQ99877 126 aa4.08□□□□□ -1.76
SF1-217ENST00000486960 HIST1H2BMQ99879 126 aa4.08□□□□□ -1.76
SF1-217ENST00000486960 HDHD3Q9BSH5 251 aaPredicted RBP4.08□□□□□ -1.76
SF1-217ENST00000486960 TSSK6Q9BXA6 273 aa4.08□□□□□ -1.76
SF1-217ENST00000486960 CCL28Q9NRJ3 127 aa4.08□□□□□ -1.76
SF1-217ENST00000486960 TMEM106BQ9NUM4 274 aa4.08□□□□□ -1.76
SF1-217ENST00000486960 F11RQ9Y624 299 aaKnown RBP4.08□□□□□ -1.76
SF1-217ENST00000486960 TRAV12-2A0A075B6T6 113 aa4.07□□□□□ -1.76
SF1-217ENST00000486960 C3orf85A0A1B0GTC6 90 aa4.07□□□□□ -1.76
SF1-217ENST00000486960 NDUFC2-KCTD14E9PQ53 114 aa4.07□□□□□ -1.76
SF1-217ENST00000486960 H3BQ15 152 aa4.07□□□□□ -1.76
SF1-217ENST00000486960 M0R378 163 aa4.07□□□□□ -1.76
SF1-217ENST00000486960 PEX7O00628 323 aa4.07□□□□□ -1.76
SF1-217ENST00000486960 TCRAP04437 139 aa4.07□□□□□ -1.76
SF1-217ENST00000486960 SEC11BP0C7V7 166 aa4.07□□□□□ -1.76
SF1-217ENST00000486960 S100A4P26447 101 aaKnown RBP4.07□□□□□ -1.76
SF1-217ENST00000486960 SRP14P37108 136 aaKnown RBP4.07□□□□□ -1.76
SF1-217ENST00000486960 DAPP51397 102 aa4.07□□□□□ -1.76
SF1-217ENST00000486960 ZNF791Q3KP31 576 aaPredicted RBP4.07□□□□□ -1.76
SF1-217ENST00000486960 ALKAL2Q6UX46 152 aa4.07□□□□□ -1.76
SF1-217ENST00000486960 Q6YL49 198 aa4.07□□□□□ -1.76
SF1-217ENST00000486960 ZNF329Q86UD4 541 aa4.07□□□□□ -1.76
SF1-217ENST00000486960 CSNK1G2-AS1Q8NCQ2 148 aa4.07□□□□□ -1.76
SF1-217ENST00000486960 OR5C1Q8NGR4 320 aa4.07□□□□□ -1.76
SF1-217ENST00000486960 OR1J4Q8NGS1 313 aa4.07□□□□□ -1.76
SF1-217ENST00000486960 DCANP1Q8TF63 244 aa4.07□□□□□ -1.76
SF1-217ENST00000486960 MRPS24Q96EL2 167 aaKnown RBP4.07□□□□□ -1.76
SF1-217ENST00000486960 TIMM17AQ99595 171 aa4.07□□□□□ -1.76
SF1-217ENST00000486960 DEFB126Q9BYW3 111 aa4.07□□□□□ -1.76
SF1-217ENST00000486960 PROK2Q9HC23 129 aa4.07□□□□□ -1.76
SF1-217ENST00000486960 DMBT1Q9UGM3 2413 aaPredicted RBP4.06□□□□□ -1.76
SF1-217ENST00000486960 FREM3P0C091 2139 aa4.06□□□□□ -1.76
SF1-217ENST00000486960 EXPH5Q8NEV8 1989 aa4.06□□□□□ -1.76
SF1-217ENST00000486960 A0A0J9YW62 118 aa4.06□□□□□ -1.76
SF1-217ENST00000486960 ZNF503-AS2A6NEH8 195 aa4.06□□□□□ -1.76
SF1-217ENST00000486960 DNAJC9-AS1A6NH13 148 aa4.06□□□□□ -1.76
SF1-217ENST00000486960 PLA2G10O15496 165 aa4.06□□□□□ -1.76
SF1-217ENST00000486960 CCL3P10147 92 aa4.06□□□□□ -1.76
SF1-217ENST00000486960 HLA-DRB4P13762 266 aa4.06□□□□□ -1.76
SF1-217ENST00000486960 ELK1P19419 428 aa4.06□□□□□ -1.76
SF1-217ENST00000486960 NMUP48645 174 aa4.06□□□□□ -1.76
SF1-217ENST00000486960 UBE2BP63146 152 aa4.06□□□□□ -1.76
SF1-217ENST00000486960 ZNF117Q03924 483 aa4.06□□□□□ -1.76
SF1-217ENST00000486960 TWIST1Q15672 202 aa4.06□□□□□ -1.76
SF1-217ENST00000486960 C10orf91Q5T1B1 145 aa4.06□□□□□ -1.76
SF1-217ENST00000486960 LINC01545Q5VT33 79 aa4.06□□□□□ -1.76
SF1-217ENST00000486960 LINC00311Q8N616 119 aa4.06□□□□□ -1.76
SF1-217ENST00000486960 OR5H2Q8NGV7 314 aa4.06□□□□□ -1.76
SF1-217ENST00000486960 LINC01560Q8TB33 94 aa4.06□□□□□ -1.76
SF1-217ENST00000486960 CCL19Q99731 98 aa4.06□□□□□ -1.76
SF1-217ENST00000486960 OCR1Q9BZK8 76 aa4.06□□□□□ -1.76
SF1-217ENST00000486960 UQCR10Q9UDW1 63 aa4.06□□□□□ -1.76
SF1-217ENST00000486960 HLA-DRB4X5D2U9 266 aa4.06□□□□□ -1.76
SF1-217ENST00000486960 WNK2Q9Y3S1 2297 aa4.06□□□□□ -1.76
SF1-217ENST00000486960 PCNX3Q9H6A9 2034 aa4.05□□□□□ -1.76
SF1-217ENST00000486960 TRBV27A0A0K0K1C4 114 aa4.05□□□□□ -1.76
SF1-217ENST00000486960 A0A1W2PQD3 144 aa4.05□□□□□ -1.76
SF1-217ENST00000486960 PINLYPA6NC86 204 aa4.05□□□□□ -1.76
SF1-217ENST00000486960 CPSF4LA6NMK7 179 aaKnown RBP4.05□□□□□ -1.76
SF1-217ENST00000486960 C16orf97H3BN30 126 aa4.05□□□□□ -1.76
SF1-217ENST00000486960 TMEM256-PLSCR3K7ERE1 68 aa4.05□□□□□ -1.76
SF1-217ENST00000486960 SOCS1O15524 211 aa4.05□□□□□ -1.76
SF1-217ENST00000486960 LTAP01374 205 aa4.05□□□□□ -1.76
SF1-217ENST00000486960 IGHV3-48P01763 117 aa4.05□□□□□ -1.76
SF1-217ENST00000486960 BGLAPP02818 100 aa4.05□□□□□ -1.76
SF1-217ENST00000486960 CHTF8P0CG12 524 aa4.05□□□□□ -1.76
SF1-217ENST00000486960 CRYGAP11844 174 aa4.05□□□□□ -1.76
SF1-217ENST00000486960 ZNF80P51504 273 aaPredicted RBP4.05□□□□□ -1.76
SF1-217ENST00000486960 HBBP68871 147 aa4.05□□□□□ -1.76
SF1-217ENST00000486960 C10orf25Q5T742 122 aa4.05□□□□□ -1.76
SF1-217ENST00000486960 SPINK14Q6IE38 97 aa4.05□□□□□ -1.76
SF1-217ENST00000486960 SLC25A42Q86VD7 318 aa4.05□□□□□ -1.76
SF1-217ENST00000486960 ZNF555Q8NEP9 628 aa4.05□□□□□ -1.76
SF1-217ENST00000486960 OTOSQ8NHW6 89 aa4.05□□□□□ -1.76
SF1-217ENST00000486960 FAM168AQ92567 244 aa4.05□□□□□ -1.76
SF1-217ENST00000486960 CLEC7AQ9BXN2 247 aa4.05□□□□□ -1.76
SF1-217ENST00000486960 AGPAT4-IT1Q9H0P7 198 aa4.05□□□□□ -1.76
SF1-217ENST00000486960 KLK15Q9H2R5 256 aa4.05□□□□□ -1.76
SF1-217ENST00000486960 TXNL4BQ9NX01 149 aaKnown RBP4.05□□□□□ -1.76
SF1-217ENST00000486960 ZNF492Q9P255 531 aa4.05□□□□□ -1.76
SF1-217ENST00000486960 TP73-AS1Q9UF72 201 aa4.05□□□□□ -1.76
SF1-217ENST00000486960 TPRKBQ9Y3C4 175 aa4.05□□□□□ -1.76
SF1-217ENST00000486960 MUC2Q02817 5179 aa4.04□□□□□ -1.76
SF1-217ENST00000486960 IGKV1D-42A0A075B6H8 117 aa4.04□□□□□ -1.76
SF1-217ENST00000486960 A0A087WW49 117 aa4.04□□□□□ -1.76
SF1-217ENST00000486960 TRAV17A0A0B4J275 112 aa4.04□□□□□ -1.76
SF1-217ENST00000486960 A0A0D9SG52 128 aa4.04□□□□□ -1.76
SF1-217ENST00000486960 A0A1B0GWA3 101 aa4.04□□□□□ -1.76
SF1-217ENST00000486960 LINC01548A6NM66 108 aa4.04□□□□□ -1.76
SF1-217ENST00000486960 K7EP34 96 aa4.04□□□□□ -1.76
SF1-217ENST00000486960 M0R129 80 aa4.04□□□□□ -1.76
SF1-217ENST00000486960 DUSP14O95147 198 aaKnown RBP4.04□□□□□ -1.76
SF1-217ENST00000486960 HRASP01112 189 aa4.04□□□□□ -1.76
SF1-217ENST00000486960 IGKV1-5P01602 117 aa4.04□□□□□ -1.76
SF1-217ENST00000486960 TRACP01848 142 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms