RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 TRGV3P03979 118 aa5.04□□□□□ -1.6
HDAC3-209ENST00000486618 T-ENOLP0DO92 83 aa5.04□□□□□ -1.6
HDAC3-209ENST00000486618 RND2P52198 227 aa5.04□□□□□ -1.6
HDAC3-209ENST00000486618 AQP4P55087 323 aa5.04□□□□□ -1.6
HDAC3-209ENST00000486618 SNRPGP62308 76 aaKnown RBP5.04□□□□□ -1.6
HDAC3-209ENST00000486618 FABP5Q01469 135 aa5.04□□□□□ -1.6
HDAC3-209ENST00000486618 HMGN3Q15651 99 aa5.04□□□□□ -1.6
HDAC3-209ENST00000486618 VMA21Q3ZAQ7 101 aa5.04□□□□□ -1.6
HDAC3-209ENST00000486618 PAPPA-AS1Q5QFB9 102 aa5.04□□□□□ -1.6
HDAC3-209ENST00000486618 CNIH2Q6PI25 160 aa5.04□□□□□ -1.6
HDAC3-209ENST00000486618 ALKAL2Q6UX46 152 aa5.04□□□□□ -1.6
HDAC3-209ENST00000486618 OR4C16Q8NGL9 310 aa5.04□□□□□ -1.6
HDAC3-209ENST00000486618 OR10AC1Q8NH08 325 aa5.04□□□□□ -1.6
HDAC3-209ENST00000486618 FRZBQ92765 325 aa5.04□□□□□ -1.6
HDAC3-209ENST00000486618 SLC25A46Q96AG3 418 aa5.04□□□□□ -1.6
HDAC3-209ENST00000486618 SLC25A38Q96DW6 304 aa5.04□□□□□ -1.6
HDAC3-209ENST00000486618 RITA1Q96K30 269 aa5.04□□□□□ -1.6
HDAC3-209ENST00000486618 SLC25A21Q9BQT8 299 aaPredicted RBP5.04□□□□□ -1.6
HDAC3-209ENST00000486618 SEC11CQ9BY50 192 aa5.04□□□□□ -1.6
HDAC3-209ENST00000486618 GABARAPL3Q9BY60 117 aa5.04□□□□□ -1.6
HDAC3-209ENST00000486618 COMMD5Q9GZQ3 224 aa5.04□□□□□ -1.6
HDAC3-209ENST00000486618 FKBP11Q9NYL4 201 aa5.04□□□□□ -1.6
HDAC3-209ENST00000486618 TAS2R4Q9NYW5 299 aa5.04□□□□□ -1.6
HDAC3-209ENST00000486618 MDFICQ9P1T7 246 aa5.04□□□□□ -1.6
HDAC3-209ENST00000486618 KLK5Q9Y337 293 aaPredicted RBP5.04□□□□□ -1.6
HDAC3-209ENST00000486618 A0A1B0GXF2 115 aa5.03□□□□□ -1.6
HDAC3-209ENST00000486618 C8orf87E5RJ46 101 aa5.03□□□□□ -1.6
HDAC3-209ENST00000486618 H0YIZ8 118 aa5.03□□□□□ -1.6
HDAC3-209ENST00000486618 CCDC179H3BU77 68 aa5.03□□□□□ -1.6
HDAC3-209ENST00000486618 H3BUA1 57 aa5.03□□□□□ -1.6
HDAC3-209ENST00000486618 GEMIN2O14893 280 aaKnown RBP5.03□□□□□ -1.6
HDAC3-209ENST00000486618 PRSS3P35030 304 aa5.03□□□□□ -1.6
HDAC3-209ENST00000486618 POLR2IP36954 125 aaKnown RBP5.03□□□□□ -1.6
HDAC3-209ENST00000486618 NDUFV3P56181 108 aaKnown RBP5.03□□□□□ -1.6
HDAC3-209ENST00000486618 RPS27AP62979 156 aaKnown RBP5.03□□□□□ -1.6
HDAC3-209ENST00000486618 CATR1Q13166 79 aa5.03□□□□□ -1.6
HDAC3-209ENST00000486618 SLC25A30Q5SVS4 291 aa5.03□□□□□ -1.6
HDAC3-209ENST00000486618 Q6ZN92 141 aa5.03□□□□□ -1.6
HDAC3-209ENST00000486618 ZNF497Q6ZNH5 498 aa5.03□□□□□ -1.6
HDAC3-209ENST00000486618 LRRTM1Q86UE6 522 aa5.03□□□□□ -1.6
HDAC3-209ENST00000486618 FAM19A4Q96LR4 140 aa5.03□□□□□ -1.6
HDAC3-209ENST00000486618 NABP2Q9BQ15 211 aa5.03□□□□□ -1.6
HDAC3-209ENST00000486618 SOSTQ9BQB4 213 aa5.03□□□□□ -1.6
HDAC3-209ENST00000486618 MAP6D1Q9H9H5 199 aa5.03□□□□□ -1.6
HDAC3-209ENST00000486618 PLEKHA3Q9HB20 300 aa5.03□□□□□ -1.6
HDAC3-209ENST00000486618 MRPS16Q9Y3D3 137 aaKnown RBP5.03□□□□□ -1.6
HDAC3-209ENST00000486618 PXMP4Q9Y6I8 212 aa5.03□□□□□ -1.6
HDAC3-209ENST00000486618 MUC4Q99102 2169 aa5.03□□□□□ -1.6
HDAC3-209ENST00000486618 PLECQ15149 4684 aaKnown RBP5.02□□□□□ -1.61
HDAC3-209ENST00000486618 HERC2O95714 4834 aa5.02□□□□□ -1.61
HDAC3-209ENST00000486618 TRAV8-6A0A0B4J262 113 aa5.02□□□□□ -1.61
HDAC3-209ENST00000486618 LOC100131303A0A0U1RQF7 123 aa5.02□□□□□ -1.61
HDAC3-209ENST00000486618 ZNF705GA8MUZ8 300 aaPredicted RBP5.02□□□□□ -1.61
HDAC3-209ENST00000486618 ISLRO14498 428 aa5.02□□□□□ -1.61
HDAC3-209ENST00000486618 CDK2AP2O75956 126 aa5.02□□□□□ -1.61
HDAC3-209ENST00000486618 EIF4EP06730 217 aaKnown RBP5.02□□□□□ -1.61
HDAC3-209ENST00000486618 EGR2P11161 476 aaPredicted RBP5.02□□□□□ -1.61
HDAC3-209ENST00000486618 SYNJ2BPP57105 145 aa5.02□□□□□ -1.61
HDAC3-209ENST00000486618 HERV-K104P61576 105 aa5.02□□□□□ -1.61
HDAC3-209ENST00000486618 NDPQ00604 133 aa5.02□□□□□ -1.61
HDAC3-209ENST00000486618 CEMP1Q6PRD7 247 aaPredicted RBP5.02□□□□□ -1.61
HDAC3-209ENST00000486618 TMEM14EPQ6UXP3 125 aa5.02□□□□□ -1.61
HDAC3-209ENST00000486618 KCNRGQ8N5I3 272 aa5.02□□□□□ -1.61
HDAC3-209ENST00000486618 RPP25LQ8N5L8 163 aaKnown RBP5.02□□□□□ -1.61
HDAC3-209ENST00000486618 ZFP41Q8N8Y5 198 aa5.02□□□□□ -1.61
HDAC3-209ENST00000486618 C2orf48Q96LS8 159 aa5.02□□□□□ -1.61
HDAC3-209ENST00000486618 NAA38Q9BRA0 125 aaKnown RBP5.02□□□□□ -1.61
HDAC3-209ENST00000486618 SELENOIQ9C0D9 397 aa5.02□□□□□ -1.61
HDAC3-209ENST00000486618 DUSP21Q9H596 190 aa5.02□□□□□ -1.61
HDAC3-209ENST00000486618 UQCR10Q9UDW1 63 aa5.02□□□□□ -1.61
HDAC3-209ENST00000486618 A0A0D9SG52 128 aa5.01□□□□□ -1.61
HDAC3-209ENST00000486618 IZUMO1RA6ND01 250 aa5.01□□□□□ -1.61
HDAC3-209ENST00000486618 GABARAPH6UMI1 98 aa5.01□□□□□ -1.61
HDAC3-209ENST00000486618 UPK2O00526 184 aa5.01□□□□□ -1.61
HDAC3-209ENST00000486618 YPEL1O60688 119 aa5.01□□□□□ -1.61
HDAC3-209ENST00000486618 IFITM1P13164 125 aa5.01□□□□□ -1.61
HDAC3-209ENST00000486618 FABP4P15090 132 aa5.01□□□□□ -1.61
HDAC3-209ENST00000486618 PSMB2P49721 201 aa5.01□□□□□ -1.61
HDAC3-209ENST00000486618 CENPWQ5EE01 88 aa5.01□□□□□ -1.61
HDAC3-209ENST00000486618 ZNF493Q6ZR52 646 aa5.01□□□□□ -1.61
HDAC3-209ENST00000486618 ZNF833PQ6ZTB9 187 aa5.01□□□□□ -1.61
HDAC3-209ENST00000486618 STPG4Q8N801 248 aa5.01□□□□□ -1.61
HDAC3-209ENST00000486618 IGF2BP2-AS1Q96M15 143 aa5.01□□□□□ -1.61
HDAC3-209ENST00000486618 YPEL2Q96QA6 119 aa5.01□□□□□ -1.61
HDAC3-209ENST00000486618 RNF5Q99942 180 aa5.01□□□□□ -1.61
HDAC3-209ENST00000486618 FAM103A1Q9BTL3 118 aaKnown RBP5.01□□□□□ -1.61
HDAC3-209ENST00000486618 EIF5A2Q9GZV4 153 aaKnown RBP5.01□□□□□ -1.61
HDAC3-209ENST00000486618 ZNF581Q9P0T4 197 aa5.01□□□□□ -1.61
HDAC3-209ENST00000486618 SELENOKQ9Y6D0 94 aa5.01□□□□□ -1.61
HDAC3-209ENST00000486618 PGPA6NDG6 321 aa5□□□□□ -1.61
HDAC3-209ENST00000486618 NDUFS5O43920 106 aa5□□□□□ -1.61
HDAC3-209ENST00000486618 KRASP01116 189 aa5□□□□□ -1.61
HDAC3-209ENST00000486618 RBMY1CP0DJD4 496 aa5□□□□□ -1.61
HDAC3-209ENST00000486618 SAA2P0DJI9 122 aaPredicted RBP5□□□□□ -1.61
HDAC3-209ENST00000486618 GADD45AP24522 165 aa5□□□□□ -1.61
HDAC3-209ENST00000486618 CRYBB3P26998 211 aa5□□□□□ -1.61
HDAC3-209ENST00000486618 OPRK1P41145 380 aa5□□□□□ -1.61
HDAC3-209ENST00000486618 TMEM258P61165 79 aa5□□□□□ -1.61
HDAC3-209ENST00000486618 AKR1C1Q04828 323 aa5□□□□□ -1.61
HDAC3-209ENST00000486618 FXYD3Q14802 87 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms