RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 NUDT11Q96G61 164 aa11.41□□□□□ -0.58
APOE-205ENST00000485628 LINC01587Q99440 93 aa11.41□□□□□ -0.58
APOE-205ENST00000485628 SPATA25Q9BR10 227 aa11.41□□□□□ -0.58
APOE-205ENST00000485628 CXCL1P09341 107 aa11.4□□□□□ -0.58
APOE-205ENST00000485628 MGST1P10620 155 aaKnown RBP11.4□□□□□ -0.58
APOE-205ENST00000485628 AZU1P20160 251 aa11.4□□□□□ -0.58
APOE-205ENST00000485628 PNRC1Q12796 327 aaPredicted RBP11.4□□□□□ -0.58
APOE-205ENST00000485628 Q8NAQ8 132 aa11.4□□□□□ -0.58
APOE-205ENST00000485628 C11orf72Q8NBR9 251 aa11.4□□□□□ -0.58
APOE-205ENST00000485628 OR11H2Q8NH07 326 aa11.4□□□□□ -0.58
APOE-205ENST00000485628 IL17DQ8TAD2 202 aa11.4□□□□□ -0.58
APOE-205ENST00000485628 RETNQ9HD89 108 aa11.4□□□□□ -0.58
APOE-205ENST00000485628 OSTCQ9NRP0 149 aa11.4□□□□□ -0.58
APOE-205ENST00000485628 ZNF705GA8MUZ8 300 aaPredicted RBP11.39□□□□□ -0.59
APOE-205ENST00000485628 F8W036 122 aa11.39□□□□□ -0.59
APOE-205ENST00000485628 NHLRC4P0CG21 123 aaPredicted RBP11.39□□□□□ -0.59
APOE-205ENST00000485628 KCNS1Q96KK3 526 aa11.39□□□□□ -0.59
APOE-205ENST00000485628 RNASE7Q9H1E1 156 aaKnown RBP11.39□□□□□ -0.59
APOE-205ENST00000485628 GNRH2O43555 120 aa11.38□□□□□ -0.59
APOE-205ENST00000485628 TYMSP04818 313 aa11.38□□□□□ -0.59
APOE-205ENST00000485628 MIFP14174 115 aa11.38□□□□□ -0.59
APOE-205ENST00000485628 MUC21Q5SSG8 566 aa11.38□□□□□ -0.59
APOE-205ENST00000485628 PRR27Q6MZM9 219 aa11.38□□□□□ -0.59
APOE-205ENST00000485628 FAM159AQ6UWV7 190 aa11.38□□□□□ -0.59
APOE-205ENST00000485628 ZNF493Q6ZR52 646 aa11.38□□□□□ -0.59
APOE-205ENST00000485628 IGHV3-16A0A0C4DH30 117 aa11.37□□□□□ -0.59
APOE-205ENST00000485628 RRN3P1Q2M238 152 aa11.37□□□□□ -0.59
APOE-205ENST00000485628 IBA57Q5T440 356 aaKnown RBP11.37□□□□□ -0.59
APOE-205ENST00000485628 TMEM263Q8WUH6 116 aaKnown RBP11.37□□□□□ -0.59
APOE-205ENST00000485628 SFRP2Q96HF1 295 aa11.37□□□□□ -0.59
APOE-205ENST00000485628 TMEM208Q9BTX3 173 aa11.37□□□□□ -0.59
APOE-205ENST00000485628 V9GYV3 84 aa11.37□□□□□ -0.59
APOE-205ENST00000485628 MUC4Q99102 2169 aa11.37□□□□□ -0.59
APOE-205ENST00000485628 IGHV3OR16-12A0A075B7B8 117 aa11.36□□□□□ -0.59
APOE-205ENST00000485628 B4DEV8 164 aa11.36□□□□□ -0.59
APOE-205ENST00000485628 P01737 135 aa11.36□□□□□ -0.59
APOE-205ENST00000485628 RNASE3P12724 160 aaKnown RBP11.36□□□□□ -0.59
APOE-205ENST00000485628 RPL19P84098 196 aaKnown RBP11.36□□□□□ -0.59
APOE-205ENST00000485628 ADIRFQ15847 76 aa11.36□□□□□ -0.59
APOE-205ENST00000485628 CT83Q5H943 113 aa11.36□□□□□ -0.59
APOE-205ENST00000485628 C9orf85Q96MD7 179 aa11.36□□□□□ -0.59
APOE-205ENST00000485628 SSBP4Q9BWG4 385 aaPredicted RBP11.36□□□□□ -0.59
APOE-205ENST00000485628 SCRT2Q9NQ03 307 aa11.36□□□□□ -0.59
APOE-205ENST00000485628 MDFICQ9P1T7 246 aa11.36□□□□□ -0.59
APOE-205ENST00000485628 IGHV4-28A0A0C4DH34 117 aa11.35□□□□□ -0.59
APOE-205ENST00000485628 ORM1P02763 201 aa11.35□□□□□ -0.59
APOE-205ENST00000485628 FOXA3P55318 350 aaPredicted RBP11.35□□□□□ -0.59
APOE-205ENST00000485628 TCL1AP56279 114 aa11.35□□□□□ -0.59
APOE-205ENST00000485628 DAZAP1Q96EP5 407 aaKnown RBP11.35□□□□□ -0.59
APOE-205ENST00000485628 C16orf74Q96GX8 76 aa11.35□□□□□ -0.59
APOE-205ENST00000485628 C11orf68Q9H3H3 251 aaKnown RBP11.35□□□□□ -0.59
APOE-205ENST00000485628 RPP21Q9H633 154 aaKnown RBP11.35□□□□□ -0.59
APOE-205ENST00000485628 TRGV11A0A075B6L2 103 aa11.34□□□□□ -0.59
APOE-205ENST00000485628 TMEM189A5PLL7 270 aa11.34□□□□□ -0.59
APOE-205ENST00000485628 CBY3A6NI87 242 aa11.34□□□□□ -0.59
APOE-205ENST00000485628 M0R036 132 aa11.34□□□□□ -0.59
APOE-205ENST00000485628 IGLC6P0CF74 106 aa11.34□□□□□ -0.59
APOE-205ENST00000485628 MED14OSP0DP75 135 aa11.34□□□□□ -0.59
APOE-205ENST00000485628 ERVFC1-1P60608 527 aa11.34□□□□□ -0.59
APOE-205ENST00000485628 DAZ2Q13117 558 aaKnown RBP11.34□□□□□ -0.59
APOE-205ENST00000485628 OR2D3Q8NGH3 330 aa11.34□□□□□ -0.59
APOE-205ENST00000485628 PTH2Q96A98 100 aa11.34□□□□□ -0.59
APOE-205ENST00000485628 ZMAT4Q9H898 229 aa11.34□□□□□ -0.59
APOE-205ENST00000485628 IL36BQ9NZH7 164 aa11.34□□□□□ -0.59
APOE-205ENST00000485628 SNAI2O43623 268 aa11.33□□□□□ -0.6
APOE-205ENST00000485628 RPS20P60866 119 aaKnown RBP11.33□□□□□ -0.6
APOE-205ENST00000485628 LINC00612Q8N6U2 182 aa11.33□□□□□ -0.6
APOE-205ENST00000485628 OR10G8Q8NGN5 311 aa11.33□□□□□ -0.6
APOE-205ENST00000485628 NAGKQ9UJ70 344 aa11.33□□□□□ -0.6
APOE-205ENST00000485628 STAB2Q8WWQ8 2551 aa11.33□□□□□ -0.6
APOE-205ENST00000485628 FAM231BA6NCW3 169 aa11.32□□□□□ -0.6
APOE-205ENST00000485628 GATCO43716 136 aaKnown RBP11.32□□□□□ -0.6
APOE-205ENST00000485628 HTN1P15515 57 aa11.32□□□□□ -0.6
APOE-205ENST00000485628 RNF212Q495C1 297 aa11.32□□□□□ -0.6
APOE-205ENST00000485628 CLRN3Q8NCR9 226 aa11.32□□□□□ -0.6
APOE-205ENST00000485628 GTSF1Q8WW33 167 aa11.32□□□□□ -0.6
APOE-205ENST00000485628 GSN-AS1Q9NRJ2 163 aa11.32□□□□□ -0.6
APOE-205ENST00000485628 GRIFINA4D1Z8 144 aa11.31□□□□□ -0.6
APOE-205ENST00000485628 SPINK4O60575 86 aa11.31□□□□□ -0.6
APOE-205ENST00000485628 OR5AL1P0C617 328 aa11.31□□□□□ -0.6
APOE-205ENST00000485628 C15orf54Q8N8G6 183 aa11.31□□□□□ -0.6
APOE-205ENST00000485628 TSKUQ8WUA8 353 aa11.31□□□□□ -0.6
APOE-205ENST00000485628 ANAPC16Q96DE5 110 aa11.31□□□□□ -0.6
APOE-205ENST00000485628 SPXQ9BT56 116 aa11.31□□□□□ -0.6
APOE-205ENST00000485628 CNFNQ9BYD5 112 aa11.31□□□□□ -0.6
APOE-205ENST00000485628 GFRA4Q9GZZ7 299 aa11.31□□□□□ -0.6
APOE-205ENST00000485628 A0A087WWC5 75 aa11.3□□□□□ -0.6
APOE-205ENST00000485628 TMSB15BA0A087X1C1 80 aa11.3□□□□□ -0.6
APOE-205ENST00000485628 SMIM27A0A1W2PRY6 76 aa11.3□□□□□ -0.6
APOE-205ENST00000485628 A8MWL6 223 aa11.3□□□□□ -0.6
APOE-205ENST00000485628 PPP1R2P9O14990 202 aa11.3□□□□□ -0.6
APOE-205ENST00000485628 NXPH4O95158 308 aa11.3□□□□□ -0.6
APOE-205ENST00000485628 ARMS2P0C7Q2 107 aa11.3□□□□□ -0.6
APOE-205ENST00000485628 GZMBP10144 247 aa11.3□□□□□ -0.6
APOE-205ENST00000485628 ASIPP42127 132 aa11.3□□□□□ -0.6
APOE-205ENST00000485628 ZNF415Q09FC8 603 aa11.3□□□□□ -0.6
APOE-205ENST00000485628 PIK3CD-AS1Q5SR53 167 aa11.3□□□□□ -0.6
APOE-205ENST00000485628 TMEM242Q9NWH2 141 aa11.3□□□□□ -0.6
APOE-205ENST00000485628 DKK2Q9UBU2 259 aa11.3□□□□□ -0.6
APOE-205ENST00000485628 TIMM8BQ9Y5J9 83 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 163.4 ms