RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 RNASE7Q9H1E1 156 aaKnown RBP12.7□□□□□ -0.38
CHMP3-207ENST00000485465 ZMAT4Q9H898 229 aa12.7□□□□□ -0.38
CHMP3-207ENST00000485465 IGKV3D-20A0A0C4DH25 116 aa12.69□□□□□ -0.38
CHMP3-207ENST00000485465 CBY3A6NI87 242 aa12.69□□□□□ -0.38
CHMP3-207ENST00000485465 KRBOX1C9JBD0 128 aa12.69□□□□□ -0.38
CHMP3-207ENST00000485465 NHLRC4P0CG21 123 aaPredicted RBP12.69□□□□□ -0.38
CHMP3-207ENST00000485465 AZU1P20160 251 aa12.69□□□□□ -0.38
CHMP3-207ENST00000485465 RRN3P1Q2M238 152 aa12.69□□□□□ -0.38
CHMP3-207ENST00000485465 LINC01559Q495D7 138 aa12.69□□□□□ -0.38
CHMP3-207ENST00000485465 FAM231DQ6ZW35 169 aa12.69□□□□□ -0.38
CHMP3-207ENST00000485465 NUDT10Q8NFP7 164 aa12.69□□□□□ -0.38
CHMP3-207ENST00000485465 NUDT11Q96G61 164 aa12.69□□□□□ -0.38
CHMP3-207ENST00000485465 TP53TG3Q9ULZ0 132 aa12.69□□□□□ -0.38
CHMP3-207ENST00000485465 B4DEV8 164 aa12.68□□□□□ -0.38
CHMP3-207ENST00000485465 M0R036 132 aa12.68□□□□□ -0.38
CHMP3-207ENST00000485465 GNRH2O43555 120 aa12.68□□□□□ -0.38
CHMP3-207ENST00000485465 P01737 135 aa12.68□□□□□ -0.38
CHMP3-207ENST00000485465 MIFP14174 115 aa12.68□□□□□ -0.38
CHMP3-207ENST00000485465 ERVFC1-1P60608 527 aa12.68□□□□□ -0.38
CHMP3-207ENST00000485465 PNRC1Q12796 327 aaPredicted RBP12.68□□□□□ -0.38
CHMP3-207ENST00000485465 IBA57Q5T440 356 aaKnown RBP12.68□□□□□ -0.38
CHMP3-207ENST00000485465 CARHSP1Q9Y2V2 147 aaKnown RBP12.68□□□□□ -0.38
CHMP3-207ENST00000485465 TMEM189A5PLL7 270 aa12.67□□□□□ -0.38
CHMP3-207ENST00000485465 TYMSP04818 313 aa12.67□□□□□ -0.38
CHMP3-207ENST00000485465 RPL19P84098 196 aaKnown RBP12.67□□□□□ -0.38
CHMP3-207ENST00000485465 ZNF575Q86XF7 245 aa12.67□□□□□ -0.38
CHMP3-207ENST00000485465 OSTCQ9NRP0 149 aa12.67□□□□□ -0.38
CHMP3-207ENST00000485465 DNAH9Q9NYC9 4486 aa12.67□□□□□ -0.38
CHMP3-207ENST00000485465 NBEAL2Q6ZNJ1 2754 aa12.67□□□□□ -0.38
CHMP3-207ENST00000485465 TRGV11A0A075B6L2 103 aa12.66□□□□□ -0.38
CHMP3-207ENST00000485465 TMSB15BA0A087X1C1 80 aa12.66□□□□□ -0.38
CHMP3-207ENST00000485465 ZNF493Q6ZR52 646 aa12.66□□□□□ -0.38
CHMP3-207ENST00000485465 Q8NAQ8 132 aa12.66□□□□□ -0.38
CHMP3-207ENST00000485465 OR2D3Q8NGH3 330 aa12.66□□□□□ -0.38
CHMP3-207ENST00000485465 RNASE8Q8TDE3 154 aaKnown RBP12.66□□□□□ -0.38
CHMP3-207ENST00000485465 TMEM263Q8WUH6 116 aaKnown RBP12.66□□□□□ -0.38
CHMP3-207ENST00000485465 SFRP2Q96HF1 295 aa12.66□□□□□ -0.38
CHMP3-207ENST00000485465 PRKDCP78527 4128 aaKnown RBP12.65□□□□□ -0.38
CHMP3-207ENST00000485465 IGHV4-28A0A0C4DH34 117 aa12.65□□□□□ -0.38
CHMP3-207ENST00000485465 GATCO43716 136 aaKnown RBP12.65□□□□□ -0.38
CHMP3-207ENST00000485465 C15orf54Q8N8G6 183 aa12.65□□□□□ -0.38
CHMP3-207ENST00000485465 C16orf74Q96GX8 76 aa12.65□□□□□ -0.38
CHMP3-207ENST00000485465 RPP21Q9H633 154 aaKnown RBP12.65□□□□□ -0.38
CHMP3-207ENST00000485465 MDFICQ9P1T7 246 aa12.65□□□□□ -0.38
CHMP3-207ENST00000485465 FBN3Q75N90 2809 aa12.65□□□□□ -0.38
CHMP3-207ENST00000485465 IGHV3-16A0A0C4DH30 117 aa12.64□□□□□ -0.39
CHMP3-207ENST00000485465 GRIFINA4D1Z8 144 aa12.64□□□□□ -0.39
CHMP3-207ENST00000485465 RPS20P60866 119 aaKnown RBP12.64□□□□□ -0.39
CHMP3-207ENST00000485465 C11orf72Q8NBR9 251 aa12.64□□□□□ -0.39
CHMP3-207ENST00000485465 OR10G8Q8NGN5 311 aa12.64□□□□□ -0.39
CHMP3-207ENST00000485465 HUWE1Q7Z6Z7 4374 aaKnown RBP12.63□□□□□ -0.39
CHMP3-207ENST00000485465 PLAC8L1A1L4L8 177 aa12.63□□□□□ -0.39
CHMP3-207ENST00000485465 CXCL1P09341 107 aa12.63□□□□□ -0.39
CHMP3-207ENST00000485465 ASIPP42127 132 aa12.63□□□□□ -0.39
CHMP3-207ENST00000485465 ZNF415Q09FC8 603 aa12.63□□□□□ -0.39
CHMP3-207ENST00000485465 DNLZQ5SXM8 178 aa12.63□□□□□ -0.39
CHMP3-207ENST00000485465 GSN-AS1Q9NRJ2 163 aa12.63□□□□□ -0.39
CHMP3-207ENST00000485465 XKRY2A2RUG3 117 aa12.62□□□□□ -0.39
CHMP3-207ENST00000485465 DEFB4AO15263 64 aa12.62□□□□□ -0.39
CHMP3-207ENST00000485465 V9GYV3 84 aa12.62□□□□□ -0.39
CHMP3-207ENST00000485465 APOC3P02656 99 aa12.61□□□□□ -0.39
CHMP3-207ENST00000485465 GZMBP10144 247 aa12.61□□□□□ -0.39
CHMP3-207ENST00000485465 RNASE3P12724 160 aaKnown RBP12.61□□□□□ -0.39
CHMP3-207ENST00000485465 S100A4P26447 101 aaKnown RBP12.61□□□□□ -0.39
CHMP3-207ENST00000485465 EMP1P54849 157 aa12.61□□□□□ -0.39
CHMP3-207ENST00000485465 TCL1AP56279 114 aa12.61□□□□□ -0.39
CHMP3-207ENST00000485465 CT83Q5H943 113 aa12.61□□□□□ -0.39
CHMP3-207ENST00000485465 C11orf68Q9H3H3 251 aaKnown RBP12.61□□□□□ -0.39
CHMP3-207ENST00000485465 A8MWL6 223 aa12.6□□□□□ -0.39
CHMP3-207ENST00000485465 SNURFLB1AK76 121 aa12.6□□□□□ -0.39
CHMP3-207ENST00000485465 PPP1R2P9O14990 202 aa12.6□□□□□ -0.39
CHMP3-207ENST00000485465 MT-ND4LP03901 98 aa12.6□□□□□ -0.39
CHMP3-207ENST00000485465 RNF212Q495C1 297 aa12.6□□□□□ -0.39
CHMP3-207ENST00000485465 CLRN3Q8NCR9 226 aa12.6□□□□□ -0.39
CHMP3-207ENST00000485465 IL17DQ8TAD2 202 aa12.6□□□□□ -0.39
CHMP3-207ENST00000485465 C9orf85Q96MD7 179 aa12.6□□□□□ -0.39
CHMP3-207ENST00000485465 TIMM8BQ9Y5J9 83 aaPredicted RBP12.6□□□□□ -0.39
CHMP3-207ENST00000485465 A0A0J9YWU9 116 aa12.59□□□□□ -0.39
CHMP3-207ENST00000485465 H3BVH4 76 aa12.59□□□□□ -0.39
CHMP3-207ENST00000485465 ARMS2P0C7Q2 107 aa12.59□□□□□ -0.39
CHMP3-207ENST00000485465 DAZ2Q13117 558 aaKnown RBP12.59□□□□□ -0.39
CHMP3-207ENST00000485465 SVBPQ8N300 66 aa12.59□□□□□ -0.39
CHMP3-207ENST00000485465 ANAPC16Q96DE5 110 aa12.59□□□□□ -0.39
CHMP3-207ENST00000485465 SPXQ9BT56 116 aa12.59□□□□□ -0.39
CHMP3-207ENST00000485465 NOP10Q9NPE3 64 aaKnown RBP12.59□□□□□ -0.39
CHMP3-207ENST00000485465 IL36BQ9NZH7 164 aa12.59□□□□□ -0.39
CHMP3-207ENST00000485465 IGLC6P0CF74 106 aa12.58□□□□□ -0.4
CHMP3-207ENST00000485465 MED14OSP0DP75 135 aa12.58□□□□□ -0.4
CHMP3-207ENST00000485465 TSKUQ8WUA8 353 aa12.58□□□□□ -0.4
CHMP3-207ENST00000485465 FER1L6-AS1Q8NA97 138 aa12.57□□□□□ -0.4
CHMP3-207ENST00000485465 GTSF1Q8WW33 167 aa12.57□□□□□ -0.4
CHMP3-207ENST00000485465 SSBP4Q9BWG4 385 aaPredicted RBP12.57□□□□□ -0.4
CHMP3-207ENST00000485465 SCRT2Q9NQ03 307 aa12.57□□□□□ -0.4
CHMP3-207ENST00000485465 U3KQK5 164 aa12.57□□□□□ -0.4
CHMP3-207ENST00000485465 A0A1W2PPQ1 181 aa12.56□□□□□ -0.4
CHMP3-207ENST00000485465 C7orf77A4D0Y5 90 aa12.56□□□□□ -0.4
CHMP3-207ENST00000485465 LYRM9A8MSI8 78 aa12.56□□□□□ -0.4
CHMP3-207ENST00000485465 SNAI2O43623 268 aa12.56□□□□□ -0.4
CHMP3-207ENST00000485465 SPINK4O60575 86 aa12.56□□□□□ -0.4
CHMP3-207ENST00000485465 SNAPINO95295 136 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms