RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 GRIFINA4D1Z8 144 aa10.6□□□□□ -0.71
LRIF1-202ENST00000485275 TMEM189A5PLL7 270 aa10.6□□□□□ -0.71
LRIF1-202ENST00000485275 C1orf158Q8N1D5 194 aa10.6□□□□□ -0.71
LRIF1-202ENST00000485275 CSNK1G2-AS1Q8NCQ2 148 aa10.6□□□□□ -0.71
LRIF1-202ENST00000485275 TSKUQ8WUA8 353 aa10.6□□□□□ -0.71
LRIF1-202ENST00000485275 SMCO4Q9NRQ5 59 aa10.6□□□□□ -0.71
LRIF1-202ENST00000485275 PRB2P02812 416 aaPredicted RBP10.59□□□□□ -0.71
LRIF1-202ENST00000485275 CXCL1P09341 107 aa10.59□□□□□ -0.71
LRIF1-202ENST00000485275 FRMD6-AS1P0C7T7 363 aa10.59□□□□□ -0.71
LRIF1-202ENST00000485275 TGIF2-C20orf24A0A0A6YYL0 155 aa10.58□□□□□ -0.72
LRIF1-202ENST00000485275 CXorf65A6NEN9 183 aa10.58□□□□□ -0.72
LRIF1-202ENST00000485275 HIGD1CA8MV81 97 aa10.58□□□□□ -0.72
LRIF1-202ENST00000485275 GNRH2O43555 120 aa10.58□□□□□ -0.72
LRIF1-202ENST00000485275 INSP01308 110 aa10.58□□□□□ -0.72
LRIF1-202ENST00000485275 TYMSP04818 313 aa10.58□□□□□ -0.72
LRIF1-202ENST00000485275 KPRPQ5T749 579 aaPredicted RBP10.58□□□□□ -0.72
LRIF1-202ENST00000485275 TUBA4BQ9H853 241 aa10.58□□□□□ -0.72
LRIF1-202ENST00000485275 IGLC6P0CF74 106 aa10.57□□□□□ -0.72
LRIF1-202ENST00000485275 TDRG1Q3Y452 100 aa10.57□□□□□ -0.72
LRIF1-202ENST00000485275 NUP35Q8NFH5 326 aa10.57□□□□□ -0.72
LRIF1-202ENST00000485275 IMMP2LQ96T52 175 aa10.57□□□□□ -0.72
LRIF1-202ENST00000485275 A0A1W2PPQ1 181 aa10.57□□□□□ -0.72
LRIF1-202ENST00000485275 A8MWL6 223 aa10.57□□□□□ -0.72
LRIF1-202ENST00000485275 SPRY2O43597 315 aa10.57□□□□□ -0.72
LRIF1-202ENST00000485275 NUTF2P61970 127 aaKnown RBP10.57□□□□□ -0.72
LRIF1-202ENST00000485275 IGHV1OR15-1A0A075B7D0 117 aa10.56□□□□□ -0.72
LRIF1-202ENST00000485275 LOC102724200A0A096LPH7 203 aaPredicted RBP10.56□□□□□ -0.72
LRIF1-202ENST00000485275 COLCA2A8K830 154 aa10.56□□□□□ -0.72
LRIF1-202ENST00000485275 SPINK4O60575 86 aa10.56□□□□□ -0.72
LRIF1-202ENST00000485275 AMBPP02760 352 aa10.56□□□□□ -0.72
LRIF1-202ENST00000485275 MORN3Q6PF18 240 aaPredicted RBP10.56□□□□□ -0.72
LRIF1-202ENST00000485275 GFRA4Q9GZZ7 299 aa10.56□□□□□ -0.72
LRIF1-202ENST00000485275 CSTL1Q9H114 145 aa10.56□□□□□ -0.72
LRIF1-202ENST00000485275 MUC21A0A0G2JKD1 596 aa10.55□□□□□ -0.72
LRIF1-202ENST00000485275 MUC21A0A140T8X8 626 aa10.55□□□□□ -0.72
LRIF1-202ENST00000485275 RNASE3P12724 160 aaKnown RBP10.55□□□□□ -0.72
LRIF1-202ENST00000485275 FOXA3P55318 350 aaPredicted RBP10.55□□□□□ -0.72
LRIF1-202ENST00000485275 FAM159AQ6UWV7 190 aa10.55□□□□□ -0.72
LRIF1-202ENST00000485275 PGLYRP4Q96LB8 373 aa10.55□□□□□ -0.72
LRIF1-202ENST00000485275 PYGO2Q9BRQ0 406 aa10.55□□□□□ -0.72
LRIF1-202ENST00000485275 IGHV3OR16-12A0A075B7B8 117 aa10.54□□□□□ -0.72
LRIF1-202ENST00000485275 H3BVH4 76 aa10.54□□□□□ -0.72
LRIF1-202ENST00000485275 CTRLP40313 264 aa10.54□□□□□ -0.72
LRIF1-202ENST00000485275 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.54□□□□□ -0.72
LRIF1-202ENST00000485275 C20orf144Q9BQM9 153 aa10.54□□□□□ -0.72
LRIF1-202ENST00000485275 TPPP3Q9BW30 176 aa10.54□□□□□ -0.72
LRIF1-202ENST00000485275 MDFICQ9P1T7 246 aa10.54□□□□□ -0.72
LRIF1-202ENST00000485275 NAT8BQ9UHF3 227 aa10.54□□□□□ -0.72
LRIF1-202ENST00000485275 MUC4Q99102 2169 aa10.54□□□□□ -0.72
LRIF1-202ENST00000485275 NBEAL2Q6ZNJ1 2754 aa10.54□□□□□ -0.72
LRIF1-202ENST00000485275 TRBV24-1A0A075B6N3 115 aa10.54□□□□□ -0.72
LRIF1-202ENST00000485275 FAM231BA6NCW3 169 aa10.54□□□□□ -0.72
LRIF1-202ENST00000485275 ARMS2P0C7Q2 107 aa10.54□□□□□ -0.72
LRIF1-202ENST00000485275 HTN1P15515 57 aa10.54□□□□□ -0.72
LRIF1-202ENST00000485275 LYZL1Q6UWQ5 148 aa10.54□□□□□ -0.72
LRIF1-202ENST00000485275 ZNF705AQ6ZN79 300 aaPredicted RBP10.54□□□□□ -0.72
LRIF1-202ENST00000485275 FER1L6-AS1Q8NA97 138 aa10.54□□□□□ -0.72
LRIF1-202ENST00000485275 IGHV3-16A0A0C4DH30 117 aa10.53□□□□□ -0.72
LRIF1-202ENST00000485275 A8MZ25 164 aa10.53□□□□□ -0.72
LRIF1-202ENST00000485275 AZU1P20160 251 aa10.53□□□□□ -0.72
LRIF1-202ENST00000485275 RPS20P60866 119 aaKnown RBP10.53□□□□□ -0.72
LRIF1-202ENST00000485275 MRPL54Q6P161 138 aaKnown RBP10.53□□□□□ -0.72
LRIF1-202ENST00000485275 KCNIP4Q6PIL6 250 aa10.53□□□□□ -0.72
LRIF1-202ENST00000485275 OR10AG1Q8NH19 301 aa10.53□□□□□ -0.72
LRIF1-202ENST00000485275 LINC01587Q99440 93 aa10.53□□□□□ -0.72
LRIF1-202ENST00000485275 SSBP4Q9BWG4 385 aaPredicted RBP10.53□□□□□ -0.72
LRIF1-202ENST00000485275 KIR2DL5BA0A0G2JN68 375 aa10.52□□□□□ -0.72
LRIF1-202ENST00000485275 KIR2DL5BA0A0G2JPC4 375 aa10.52□□□□□ -0.72
LRIF1-202ENST00000485275 K7EIL1 84 aa10.52□□□□□ -0.72
LRIF1-202ENST00000485275 SNAI2O43623 268 aa10.52□□□□□ -0.72
LRIF1-202ENST00000485275 S100PP25815 95 aa10.52□□□□□ -0.72
LRIF1-202ENST00000485275 DNLZQ5SXM8 178 aa10.52□□□□□ -0.72
LRIF1-202ENST00000485275 KIR2DL5AQ8N109 375 aa10.52□□□□□ -0.72
LRIF1-202ENST00000485275 KIR2DL5BQ8NHK3 375 aa10.52□□□□□ -0.72
LRIF1-202ENST00000485275 KCNS1Q96KK3 526 aa10.52□□□□□ -0.72
LRIF1-202ENST00000485275 LINC00467Q9BRT7 94 aa10.52□□□□□ -0.72
LRIF1-202ENST00000485275 C1QTNF4Q9BXJ3 329 aa10.52□□□□□ -0.72
LRIF1-202ENST00000485275 SCRT2Q9NQ03 307 aa10.52□□□□□ -0.72
LRIF1-202ENST00000485275 ZMAT5Q9UDW3 170 aaKnown RBP10.52□□□□□ -0.72
LRIF1-202ENST00000485275 A0A1B0GXF2 115 aa10.52□□□□□ -0.73
LRIF1-202ENST00000485275 XKRY2A2RUG3 117 aa10.52□□□□□ -0.73
LRIF1-202ENST00000485275 CBY3A6NI87 242 aa10.52□□□□□ -0.73
LRIF1-202ENST00000485275 ASIPP42127 132 aa10.52□□□□□ -0.73
LRIF1-202ENST00000485275 SSTP61278 116 aa10.52□□□□□ -0.73
LRIF1-202ENST00000485275 DEFB135Q30KP9 77 aa10.52□□□□□ -0.73
LRIF1-202ENST00000485275 C11orf72Q8NBR9 251 aa10.52□□□□□ -0.73
LRIF1-202ENST00000485275 TIMM8BQ9Y5J9 83 aaPredicted RBP10.52□□□□□ -0.73
LRIF1-202ENST00000485275 BTF3L4Q96K17 158 aa10.51□□□□□ -0.73
LRIF1-202ENST00000485275 C9orf85Q96MD7 179 aa10.51□□□□□ -0.73
LRIF1-202ENST00000485275 TMEM208Q9BTX3 173 aa10.51□□□□□ -0.73
LRIF1-202ENST00000485275 CNFNQ9BYD5 112 aa10.51□□□□□ -0.73
LRIF1-202ENST00000485275 MSRB1Q9NZV6 116 aa10.51□□□□□ -0.73
LRIF1-202ENST00000485275 OR5AL1P0C617 328 aa10.5□□□□□ -0.73
LRIF1-202ENST00000485275 APOC4P55056 127 aa10.5□□□□□ -0.73
LRIF1-202ENST00000485275 TMEM256Q8N2U0 113 aa10.5□□□□□ -0.73
LRIF1-202ENST00000485275 RNASE8Q8TDE3 154 aaKnown RBP10.5□□□□□ -0.73
LRIF1-202ENST00000485275 FAM210BQ96KR6 192 aa10.5□□□□□ -0.73
LRIF1-202ENST00000485275 X6R8D5 127 aa10.5□□□□□ -0.73
LRIF1-202ENST00000485275 TRAV9-1A0A075B6T8 112 aa10.49□□□□□ -0.73
LRIF1-202ENST00000485275 PLAC8L1A1L4L8 177 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms