RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 HAMPP81172 84 aa10.46□□□□□ -0.73
HLA-DQB1-208ENST00000484729 OR2G3Q8NGZ4 309 aa10.46□□□□□ -0.73
HLA-DQB1-208ENST00000484729 TNFRSF18Q9Y5U5 241 aa10.46□□□□□ -0.73
HLA-DQB1-208ENST00000484729 TRBV7-9A0A0J9YWB2 115 aa10.45□□□□□ -0.74
HLA-DQB1-208ENST00000484729 A0A1W2PPV4 95 aa10.45□□□□□ -0.74
HLA-DQB1-208ENST00000484729 EREGO14944 169 aa10.45□□□□□ -0.74
HLA-DQB1-208ENST00000484729 MBP02144 154 aa10.45□□□□□ -0.74
HLA-DQB1-208ENST00000484729 DNAH10OSP0CZ25 163 aa10.45□□□□□ -0.74
HLA-DQB1-208ENST00000484729 CRYBA4P53673 196 aa10.45□□□□□ -0.74
HLA-DQB1-208ENST00000484729 TAS2R45P59539 299 aa10.45□□□□□ -0.74
HLA-DQB1-208ENST00000484729 SERF2P84101 59 aa10.45□□□□□ -0.74
HLA-DQB1-208ENST00000484729 SLAQ13239 276 aa10.45□□□□□ -0.74
HLA-DQB1-208ENST00000484729 KHDC3LQ587J8 217 aa10.45□□□□□ -0.74
HLA-DQB1-208ENST00000484729 OR10G4Q8NGN3 311 aa10.45□□□□□ -0.74
HLA-DQB1-208ENST00000484729 OR10G9Q8NGN4 311 aa10.45□□□□□ -0.74
HLA-DQB1-208ENST00000484729 OR10G7Q8NGN6 311 aa10.45□□□□□ -0.74
HLA-DQB1-208ENST00000484729 CYTL1Q9NRR1 136 aa10.45□□□□□ -0.74
HLA-DQB1-208ENST00000484729 HHLA3Q9XRX5 114 aa10.45□□□□□ -0.74
HLA-DQB1-208ENST00000484729 TRGV4A0A0C4DH28 118 aa10.44□□□□□ -0.74
HLA-DQB1-208ENST00000484729 CDC34P49427 236 aaPredicted RBP10.44□□□□□ -0.74
HLA-DQB1-208ENST00000484729 ERVFC1-1P60608 527 aa10.44□□□□□ -0.74
HLA-DQB1-208ENST00000484729 EIF5AP63241 154 aaKnown RBP10.44□□□□□ -0.74
HLA-DQB1-208ENST00000484729 FHL2Q14192 279 aa10.44□□□□□ -0.74
HLA-DQB1-208ENST00000484729 MRPL23Q16540 153 aaKnown RBP10.44□□□□□ -0.74
HLA-DQB1-208ENST00000484729 AKR1C8PQ5T2L2 129 aa10.44□□□□□ -0.74
HLA-DQB1-208ENST00000484729 CDPF1Q6NVV7 123 aa10.44□□□□□ -0.74
HLA-DQB1-208ENST00000484729 RBAKDNA6NC62 111 aa10.43□□□□□ -0.74
HLA-DQB1-208ENST00000484729 SFTA3P0C7M3 94 aa10.43□□□□□ -0.74
HLA-DQB1-208ENST00000484729 LYPD5Q6UWN5 251 aa10.43□□□□□ -0.74
HLA-DQB1-208ENST00000484729 NEGR1Q7Z3B1 354 aa10.43□□□□□ -0.74
HLA-DQB1-208ENST00000484729 PCNPQ8WW12 178 aaKnown RBP10.43□□□□□ -0.74
HLA-DQB1-208ENST00000484729 NAGKQ9UJ70 344 aa10.43□□□□□ -0.74
HLA-DQB1-208ENST00000484729 TRGV11A0A075B6L2 103 aa10.42□□□□□ -0.74
HLA-DQB1-208ENST00000484729 FAM229AH3BQW9 127 aa10.42□□□□□ -0.74
HLA-DQB1-208ENST00000484729 TPT1P13693 172 aaKnown RBP10.42□□□□□ -0.74
HLA-DQB1-208ENST00000484729 SRIP30626 198 aa10.42□□□□□ -0.74
HLA-DQB1-208ENST00000484729 TMEM183BQ1AE95 376 aa10.42□□□□□ -0.74
HLA-DQB1-208ENST00000484729 LGALSLQ3ZCW2 172 aaPredicted RBP10.42□□□□□ -0.74
HLA-DQB1-208ENST00000484729 FAM159AQ6UWV7 190 aa10.42□□□□□ -0.74
HLA-DQB1-208ENST00000484729 TMEM183AQ8IXX5 376 aa10.42□□□□□ -0.74
HLA-DQB1-208ENST00000484729 RPH3ALQ9UNE2 315 aa10.42□□□□□ -0.74
HLA-DQB1-208ENST00000484729 DIRC3C9JPN6 131 aa10.41□□□□□ -0.74
HLA-DQB1-208ENST00000484729 HMGB3O15347 200 aaKnown RBP10.41□□□□□ -0.74
HLA-DQB1-208ENST00000484729 EIF3GO75821 320 aaKnown RBP eCLIP10.41□□□□□ -0.74
HLA-DQB1-208ENST00000484729 Q6AWC8 147 aa10.41□□□□□ -0.74
HLA-DQB1-208ENST00000484729 Q6ZSN1 163 aa10.41□□□□□ -0.74
HLA-DQB1-208ENST00000484729 C9orf62Q8N4C0 152 aa10.41□□□□□ -0.74
HLA-DQB1-208ENST00000484729 ZNF479Q96JC4 524 aa10.41□□□□□ -0.74
HLA-DQB1-208ENST00000484729 SPXQ9BT56 116 aa10.41□□□□□ -0.74
HLA-DQB1-208ENST00000484729 ACTR3CQ9C0K3 210 aaPredicted RBP10.41□□□□□ -0.74
HLA-DQB1-208ENST00000484729 UBR4Q5T4S7 5183 aa10.41□□□□□ -0.74
HLA-DQB1-208ENST00000484729 K7EQD1 137 aa10.4□□□□□ -0.74
HLA-DQB1-208ENST00000484729 GYPEP15421 78 aa10.4□□□□□ -0.74
HLA-DQB1-208ENST00000484729 PQLC2Q6ZP29 291 aa10.4□□□□□ -0.74
HLA-DQB1-208ENST00000484729 NFE4Q86UQ8 179 aa10.4□□□□□ -0.74
HLA-DQB1-208ENST00000484729 CMTM2Q8TAZ6 248 aa10.4□□□□□ -0.74
HLA-DQB1-208ENST00000484729 LENEPQ9Y5L5 61 aa10.4□□□□□ -0.74
HLA-DQB1-208ENST00000484729 LY96Q9Y6Y9 160 aa10.4□□□□□ -0.74
HLA-DQB1-208ENST00000484729 TRAV9-2A0A087WT02 112 aa10.39□□□□□ -0.75
HLA-DQB1-208ENST00000484729 A0A087WTM6 91 aa10.39□□□□□ -0.75
HLA-DQB1-208ENST00000484729 ARL14EPLP0DKL9 152 aa10.39□□□□□ -0.75
HLA-DQB1-208ENST00000484729 NKX2-5P52952 324 aaPredicted RBP10.39□□□□□ -0.75
HLA-DQB1-208ENST00000484729 WFDC10BQ8IUB3 73 aa10.39□□□□□ -0.75
HLA-DQB1-208ENST00000484729 IQCF2Q8IXL9 164 aa10.39□□□□□ -0.75
HLA-DQB1-208ENST00000484729 STOML3Q8TAV4 291 aa10.39□□□□□ -0.75
HLA-DQB1-208ENST00000484729 RAB24Q969Q5 203 aa10.39□□□□□ -0.75
HLA-DQB1-208ENST00000484729 OTORQ9NRC9 128 aa10.39□□□□□ -0.75
HLA-DQB1-208ENST00000484729 CTXND1A0A1B0GTU2 59 aa10.38□□□□□ -0.75
HLA-DQB1-208ENST00000484729 ORM1P02763 201 aa10.38□□□□□ -0.75
HLA-DQB1-208ENST00000484729 SEC11BP0C7V7 166 aa10.38□□□□□ -0.75
HLA-DQB1-208ENST00000484729 FAM74A1Q5RGS3 127 aa10.38□□□□□ -0.75
HLA-DQB1-208ENST00000484729 SLC51BQ86UW2 128 aa10.38□□□□□ -0.75
HLA-DQB1-208ENST00000484729 TMED6Q8WW62 240 aa10.38□□□□□ -0.75
HLA-DQB1-208ENST00000484729 RASL10AQ92737 203 aa10.38□□□□□ -0.75
HLA-DQB1-208ENST00000484729 TRAV4A0A0B4J268 109 aa10.37□□□□□ -0.75
HLA-DQB1-208ENST00000484729 PGPA6NDG6 321 aa10.37□□□□□ -0.75
HLA-DQB1-208ENST00000484729 C9JCJ5 164 aa10.37□□□□□ -0.75
HLA-DQB1-208ENST00000484729 F6UZH7 168 aa10.37□□□□□ -0.75
HLA-DQB1-208ENST00000484729 CXorf1O96002 111 aa10.37□□□□□ -0.75
HLA-DQB1-208ENST00000484729 STAG3L2P0CL84 134 aa10.37□□□□□ -0.75
HLA-DQB1-208ENST00000484729 STAG3L3P0CL85 134 aa10.37□□□□□ -0.75
HLA-DQB1-208ENST00000484729 EVI2AP22794 236 aa10.37□□□□□ -0.75
HLA-DQB1-208ENST00000484729 GCSHP23434 173 aa10.37□□□□□ -0.75
HLA-DQB1-208ENST00000484729 EIF5AL1Q6IS14 154 aaKnown RBP10.37□□□□□ -0.75
HLA-DQB1-208ENST00000484729 GOLT1AQ6ZVE7 132 aa10.37□□□□□ -0.75
HLA-DQB1-208ENST00000484729 TXNDC17Q9BRA2 123 aa10.37□□□□□ -0.75
HLA-DQB1-208ENST00000484729 MSRB1Q9NZV6 116 aa10.37□□□□□ -0.75
HLA-DQB1-208ENST00000484729 UMAD1C9J7I0 102 aa10.36□□□□□ -0.75
HLA-DQB1-208ENST00000484729 M0R2P5 195 aa10.36□□□□□ -0.75
HLA-DQB1-208ENST00000484729 GCHFRP30047 84 aa10.36□□□□□ -0.75
HLA-DQB1-208ENST00000484729 TDRG1Q3Y452 100 aa10.36□□□□□ -0.75
HLA-DQB1-208ENST00000484729 OR4C5Q8NGB2 326 aa10.36□□□□□ -0.75
HLA-DQB1-208ENST00000484729 FAM213BQ8TBF2 198 aa10.36□□□□□ -0.75
HLA-DQB1-208ENST00000484729 TRAV21A0A0B4J279 112 aa10.35□□□□□ -0.75
HLA-DQB1-208ENST00000484729 IGHV3-16A0A0C4DH30 117 aa10.35□□□□□ -0.75
HLA-DQB1-208ENST00000484729 MAP1LC3B2A6NCE7 125 aa10.35□□□□□ -0.75
HLA-DQB1-208ENST00000484729 GNRH2O43555 120 aa10.35□□□□□ -0.75
HLA-DQB1-208ENST00000484729 GNG5P63218 68 aa10.35□□□□□ -0.75
HLA-DQB1-208ENST00000484729 ZNF726P1Q15940 193 aa10.35□□□□□ -0.75
HLA-DQB1-208ENST00000484729 MAP1LC3BQ9GZQ8 125 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms