RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 LAMC3Q9Y6N6 1575 aa0.13□□□□□ -2.39
SCAF11-207ENST00000484275 UNC79Q9P2D8 2635 aa0.13□□□□□ -2.39
SCAF11-207ENST00000484275 NEBP20929 6669 aa0.13□□□□□ -2.39
SCAF11-207ENST00000484275 HRNRQ86YZ3 2850 aaPredicted RBP0.12□□□□□ -2.39
SCAF11-207ENST00000484275 IGF2RP11717 2491 aa0.12□□□□□ -2.39
SCAF11-207ENST00000484275 LAMB1P07942 1786 aa0.12□□□□□ -2.39
SCAF11-207ENST00000484275 CASZ1Q86V15 1759 aa0.12□□□□□ -2.39
SCAF11-207ENST00000484275 UNC13BO14795 1591 aa0.12□□□□□ -2.39
SCAF11-207ENST00000484275 ZCCHC6Q5VYS8 1495 aaKnown RBP0.12□□□□□ -2.39
SCAF11-207ENST00000484275 PTPRZ1P23471 2315 aaPredicted RBP0.12□□□□□ -2.39
SCAF11-207ENST00000484275 MED23Q9ULK4 1368 aa0.12□□□□□ -2.39
SCAF11-207ENST00000484275 NBDYA0A0U1RRE5 68 aa0.12□□□□□ -2.39
SCAF11-207ENST00000484275 PNMA8CA0A1B0GUJ8 204 aa0.12□□□□□ -2.39
SCAF11-207ENST00000484275 HIGD1CA8MV81 97 aa0.12□□□□□ -2.39
SCAF11-207ENST00000484275 H3BMG7 143 aa0.12□□□□□ -2.39
SCAF11-207ENST00000484275 TPST1O60507 370 aa0.12□□□□□ -2.39
SCAF11-207ENST00000484275 LY6G6CO95867 125 aa0.12□□□□□ -2.39
SCAF11-207ENST00000484275 SAMD13Q5VXD3 122 aa0.12□□□□□ -2.39
SCAF11-207ENST00000484275 CSAG1Q6PB30 78 aa0.12□□□□□ -2.39
SCAF11-207ENST00000484275 HRCT1Q6UXD1 115 aa0.12□□□□□ -2.39
SCAF11-207ENST00000484275 C5orf56Q8N8D9 126 aa0.12□□□□□ -2.39
SCAF11-207ENST00000484275 OR9Q1Q8NGQ5 310 aa0.12□□□□□ -2.39
SCAF11-207ENST00000484275 CCDC115Q96NT0 180 aa0.12□□□□□ -2.39
SCAF11-207ENST00000484275 CBLN4Q9NTU7 201 aa0.12□□□□□ -2.39
SCAF11-207ENST00000484275 FKBP11Q9NYL4 201 aa0.12□□□□□ -2.39
SCAF11-207ENST00000484275 PHIPQ8WWQ0 1821 aa0.12□□□□□ -2.39
SCAF11-207ENST00000484275 ABCA12Q86UK0 2595 aa0.11□□□□□ -2.39
SCAF11-207ENST00000484275 MYH6P13533 1939 aa0.11□□□□□ -2.39
SCAF11-207ENST00000484275 AKAP11Q9UKA4 1901 aa0.11□□□□□ -2.39
SCAF11-207ENST00000484275 ANK2Q01484 3957 aa0.11□□□□□ -2.39
SCAF11-207ENST00000484275 NRXN2Q9P2S2 1712 aa0.11□□□□□ -2.39
SCAF11-207ENST00000484275 LOC107984156A0A0G2JMH3 177 aa0.11□□□□□ -2.39
SCAF11-207ENST00000484275 TMEM189A5PLL7 270 aa0.11□□□□□ -2.39
SCAF11-207ENST00000484275 IFNA21P01568 189 aa0.11□□□□□ -2.39
SCAF11-207ENST00000484275 HBDP02042 147 aa0.11□□□□□ -2.39
SCAF11-207ENST00000484275 FABP1P07148 127 aa0.11□□□□□ -2.39
SCAF11-207ENST00000484275 NEFHP12036 1026 aa0.11□□□□□ -2.39
SCAF11-207ENST00000484275 SLC25A4P12235 298 aa0.11□□□□□ -2.39
SCAF11-207ENST00000484275 RPL7P18124 248 aaKnown RBP0.11□□□□□ -2.39
SCAF11-207ENST00000484275 RPL22P35268 128 aaKnown RBP0.11□□□□□ -2.39
SCAF11-207ENST00000484275 BLCAPP62952 87 aa0.11□□□□□ -2.39
SCAF11-207ENST00000484275 SPINK6Q6UWN8 80 aa0.11□□□□□ -2.39
SCAF11-207ENST00000484275 IDO2Q6ZQW0 420 aa0.11□□□□□ -2.39
SCAF11-207ENST00000484275 ARL17AQ8IVW1 177 aa0.11□□□□□ -2.39
SCAF11-207ENST00000484275 BRK1Q8WUW1 75 aa0.11□□□□□ -2.39
SCAF11-207ENST00000484275 LINC00208Q96KT6 92 aa0.11□□□□□ -2.39
SCAF11-207ENST00000484275 SMIM7Q9BQ49 75 aa0.11□□□□□ -2.39
SCAF11-207ENST00000484275 DDA1Q9BW61 102 aa0.11□□□□□ -2.39
SCAF11-207ENST00000484275 MRPL36Q9P0J6 103 aaKnown RBP0.11□□□□□ -2.39
SCAF11-207ENST00000484275 TRAPPC2LQ9UL33 140 aa0.11□□□□□ -2.39
SCAF11-207ENST00000484275 COL7A1Q02388 2944 aa0.11□□□□□ -2.39
SCAF11-207ENST00000484275 CDK5RAP2Q96SN8 1893 aa0.11□□□□□ -2.39
SCAF11-207ENST00000484275 TTC28Q96AY4 2481 aa0.11□□□□□ -2.39
SCAF11-207ENST00000484275 SIPA1L3O60292 1781 aaPredicted RBP0.11□□□□□ -2.39
SCAF11-207ENST00000484275 OVOS2A0A0G2JMS6 1433 aa0.11□□□□□ -2.39
SCAF11-207ENST00000484275 ARHGAP31Q2M1Z3 1444 aa0.11□□□□□ -2.39
SCAF11-207ENST00000484275 NCOR2Q9Y618 2525 aa0.11□□□□□ -2.39
SCAF11-207ENST00000484275 ARFGEF1Q9Y6D6 1849 aa0.1□□□□□ -2.39
SCAF11-207ENST00000484275 ARAP1Q96P48 1450 aa0.1□□□□□ -2.39
SCAF11-207ENST00000484275 SPAG17Q6Q759 2223 aa0.1□□□□□ -2.39
SCAF11-207ENST00000484275 A0A0G2JMM0 328 aa0.1□□□□□ -2.39
SCAF11-207ENST00000484275 LOC101927531A0A1B0GV80 90 aa0.1□□□□□ -2.39
SCAF11-207ENST00000484275 J3KT08 172 aa0.1□□□□□ -2.39
SCAF11-207ENST00000484275 FXYD1O00168 92 aa0.1□□□□□ -2.39
SCAF11-207ENST00000484275 CDC42EP2O14613 210 aa0.1□□□□□ -2.39
SCAF11-207ENST00000484275 UQCRQO14949 82 aa0.1□□□□□ -2.39
SCAF11-207ENST00000484275 ADCYAP1P18509 176 aa0.1□□□□□ -2.39
SCAF11-207ENST00000484275 SDC4P31431 198 aa0.1□□□□□ -2.39
SCAF11-207ENST00000484275 CKS2P33552 79 aa0.1□□□□□ -2.39
SCAF11-207ENST00000484275 PSPHP78330 225 aa0.1□□□□□ -2.39
SCAF11-207ENST00000484275 KLKP1Q107X0 134 aa0.1□□□□□ -2.39
SCAF11-207ENST00000484275 RHOHQ15669 191 aa0.1□□□□□ -2.39
SCAF11-207ENST00000484275 TMEM128Q5BJH2 165 aa0.1□□□□□ -2.39
SCAF11-207ENST00000484275 LYPD5Q6UWN5 251 aa0.1□□□□□ -2.39
SCAF11-207ENST00000484275 SMIM15Q7Z3B0 74 aa0.1□□□□□ -2.39
SCAF11-207ENST00000484275 OR4S1Q8NGB4 309 aa0.1□□□□□ -2.39
SCAF11-207ENST00000484275 OTOSQ8NHW6 89 aa0.1□□□□□ -2.39
SCAF11-207ENST00000484275 SKA2Q8WVK7 121 aaPredicted RBP0.1□□□□□ -2.39
SCAF11-207ENST00000484275 ATG5Q9H1Y0 275 aa0.1□□□□□ -2.39
SCAF11-207ENST00000484275 CACNA1HO95180 2353 aa0.1□□□□□ -2.39
SCAF11-207ENST00000484275 TPRP12270 2363 aaKnown RBP0.1□□□□□ -2.39
SCAF11-207ENST00000484275 UHRF1BP1LA0JNW5 1464 aa0.1□□□□□ -2.39
SCAF11-207ENST00000484275 MYH8P13535 1937 aa0.09□□□□□ -2.39
SCAF11-207ENST00000484275 TENM4Q6N022 2769 aa0.09□□□□□ -2.39
SCAF11-207ENST00000484275 IGHV1-24A0A0C4DH33 117 aa0.09□□□□□ -2.4
SCAF11-207ENST00000484275 TRBV10-1A0A0K0K1A3 114 aa0.09□□□□□ -2.4
SCAF11-207ENST00000484275 TEX49A0A1B0GTD5 131 aa0.09□□□□□ -2.4
SCAF11-207ENST00000484275 MCRIP1C9JLW8 97 aa0.09□□□□□ -2.4
SCAF11-207ENST00000484275 TSTD3H0UI37 97 aa0.09□□□□□ -2.4
SCAF11-207ENST00000484275 M0QZK8 103 aa0.09□□□□□ -2.4
SCAF11-207ENST00000484275 IL7P13232 177 aa0.09□□□□□ -2.4
SCAF11-207ENST00000484275 HIST1H1BP16401 226 aaKnown RBP0.09□□□□□ -2.4
SCAF11-207ENST00000484275 S100GP29377 79 aa0.09□□□□□ -2.4
SCAF11-207ENST00000484275 POLR2JP52435 117 aaKnown RBP0.09□□□□□ -2.4
SCAF11-207ENST00000484275 PCBD1P61457 104 aa0.09□□□□□ -2.4
SCAF11-207ENST00000484275 PLGLB1Q02325 96 aa0.09□□□□□ -2.4
SCAF11-207ENST00000484275 ZNF56Q15929 161 aa0.09□□□□□ -2.4
SCAF11-207ENST00000484275 Q5XG85 94 aa0.09□□□□□ -2.4
SCAF11-207ENST00000484275 UNQ5815/PRO19632Q6UWF5 114 aa0.09□□□□□ -2.4
SCAF11-207ENST00000484275 OR8I2Q8N0Y5 310 aa0.09□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms