RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 TCTAP57738 103 aa15.01□□□□□ -0.01
LIMS2-215ENST00000484252 MYOZ3Q8TDC0 251 aa15.01□□□□□ -0.01
LIMS2-215ENST00000484252 HIVEP3Q5T1R4 2406 aa15□□□□□ -0.01
LIMS2-215ENST00000484252 HLA-DRB4P13762 266 aa15□□□□□ -0.01
LIMS2-215ENST00000484252 OR10J6PQ8NGY7 276 aa15□□□□□ -0.01
LIMS2-215ENST00000484252 USMG5Q96IX5 58 aa15□□□□□ -0.01
LIMS2-215ENST00000484252 C20orf173Q96LM9 149 aa15□□□□□ -0.01
LIMS2-215ENST00000484252 HLA-DRB4X5D2U9 266 aa15□□□□□ -0.01
LIMS2-215ENST00000484252 WNK2Q9Y3S1 2297 aa14.99□□□□□ -0.01
LIMS2-215ENST00000484252 SRSF1Q07955 248 aaKnown RBP eCLIP14.99□□□□□ -0.01
LIMS2-215ENST00000484252 SPTBN1Q01082 2364 aaKnown RBP14.99□□□□□ -0.01
LIMS2-215ENST00000484252 C19orf84I3L1E1 186 aa14.99□□□□□ -0.01
LIMS2-215ENST00000484252 LINC00527Q9UJ94 153 aa14.99□□□□□ -0.01
LIMS2-215ENST00000484252 TRAV21A0A0B4J279 112 aa14.98□□□□□ -0.01
LIMS2-215ENST00000484252 H3BVH4 76 aa14.98□□□□□ -0.01
LIMS2-215ENST00000484252 PRR9Q5T870 116 aa14.98□□□□□ -0.01
LIMS2-215ENST00000484252 SIGMAR1Q99720 223 aa14.98□□□□□ -0.01
LIMS2-215ENST00000484252 PIMREGQ9BSJ6 248 aa14.98□□□□□ -0.01
LIMS2-215ENST00000484252 IGHV3OR16-10A0A075B7F0 116 aa14.97□□□□□ -0.01
LIMS2-215ENST00000484252 SOCS3O14543 225 aa14.97□□□□□ -0.01
LIMS2-215ENST00000484252 TRAV26-2A0A0B4J265 109 aa14.97□□□□□ -0.01
LIMS2-215ENST00000484252 A0A1B0GV72 72 aa14.97□□□□□ -0.01
LIMS2-215ENST00000484252 UNQ9165/PRO28630Q6UXU0 137 aa14.97□□□□□ -0.01
LIMS2-215ENST00000484252 GPHB5Q86YW7 130 aa14.97□□□□□ -0.01
LIMS2-215ENST00000484252 ZFAND2AQ8N6M9 145 aa14.97□□□□□ -0.01
LIMS2-215ENST00000484252 TRAV40A0A0B4J280 105 aa14.96□□□□□ -0.01
LIMS2-215ENST00000484252 TMEM8BA6NDV4 472 aa14.96□□□□□ -0.01
LIMS2-215ENST00000484252 SMIM13P0DJ93 91 aa14.96□□□□□ -0.01
LIMS2-215ENST00000484252 MED14OSP0DP75 135 aa14.96□□□□□ -0.01
LIMS2-215ENST00000484252 Q6ZQT7 251 aa14.96□□□□□ -0.01
LIMS2-215ENST00000484252 PRORYQ9H606 182 aa14.96□□□□□ -0.01
LIMS2-215ENST00000484252 IGKV2D-26A0A0A0MRZ7 120 aa14.96□□□□□ -0.02
LIMS2-215ENST00000484252 J3QR89 54 aa14.96□□□□□ -0.02
LIMS2-215ENST00000484252 IGHG2P01859 326 aa14.96□□□□□ -0.02
LIMS2-215ENST00000484252 SAMD5Q5TGI4 173 aa14.96□□□□□ -0.02
LIMS2-215ENST00000484252 BRD3OSQ6XYD6 125 aa14.96□□□□□ -0.02
LIMS2-215ENST00000484252 SMIM2Q9BVW6 85 aa14.95□□□□□ -0.02
LIMS2-215ENST00000484252 A0A087WX48 190 aa14.94□□□□□ -0.02
LIMS2-215ENST00000484252 TRBV7-9A0A0J9YWB2 115 aa14.94□□□□□ -0.02
LIMS2-215ENST00000484252 TRBV12-3P01733 135 aa14.94□□□□□ -0.02
LIMS2-215ENST00000484252 ASIPP42127 132 aa14.94□□□□□ -0.02
LIMS2-215ENST00000484252 ZC2HC1BQ5TFG8 222 aa14.94□□□□□ -0.02
LIMS2-215ENST00000484252 K7EMI3 77 aa14.94□□□□□ -0.02
LIMS2-215ENST00000484252 RPL24P83731 157 aaKnown RBP14.94□□□□□ -0.02
LIMS2-215ENST00000484252 RAB37Q96AX2 223 aa14.94□□□□□ -0.02
LIMS2-215ENST00000484252 FAM19A4Q96LR4 140 aa14.94□□□□□ -0.02
LIMS2-215ENST00000484252 C20orf78Q9BR46 151 aa14.94□□□□□ -0.02
LIMS2-215ENST00000484252 IGHV4-61A0A0C4DH41 118 aa14.93□□□□□ -0.02
LIMS2-215ENST00000484252 A6NDX4 124 aa14.93□□□□□ -0.02
LIMS2-215ENST00000484252 PLNP26678 52 aa14.93□□□□□ -0.02
LIMS2-215ENST00000484252 ORMDL2Q53FV1 153 aa14.93□□□□□ -0.02
LIMS2-215ENST00000484252 GTSCR1Q86UQ5 136 aa14.93□□□□□ -0.02
LIMS2-215ENST00000484252 DPH3P1Q9H4G8 78 aa14.93□□□□□ -0.02
LIMS2-215ENST00000484252 CHD8Q9HCK8 2581 aa14.93□□□□□ -0.02
LIMS2-215ENST00000484252 NCOR2Q9Y618 2525 aa14.93□□□□□ -0.02
LIMS2-215ENST00000484252 SLC25A16P16260 332 aa14.93□□□□□ -0.02
LIMS2-215ENST00000484252 AZU1P20160 251 aa14.93□□□□□ -0.02
LIMS2-215ENST00000484252 GNLYP22749 145 aa14.93□□□□□ -0.02
LIMS2-215ENST00000484252 S100A4P26447 101 aaKnown RBP14.93□□□□□ -0.02
LIMS2-215ENST00000484252 APRG1Q8IVJ8 170 aa14.93□□□□□ -0.02
LIMS2-215ENST00000484252 CHAC1Q9BUX1 264 aa14.93□□□□□ -0.02
LIMS2-215ENST00000484252 TMEM160Q9NX00 188 aa14.93□□□□□ -0.02
LIMS2-215ENST00000484252 MRPL35Q9NZE8 188 aaKnown RBP14.93□□□□□ -0.02
LIMS2-215ENST00000484252 TRAV12-1A0A0B4J245 112 aa14.92□□□□□ -0.02
LIMS2-215ENST00000484252 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.92□□□□□ -0.02
LIMS2-215ENST00000484252 CD300EQ496F6 205 aaPredicted RBP14.92□□□□□ -0.02
LIMS2-215ENST00000484252 C10orf105Q8TEF2 133 aa14.92□□□□□ -0.02
LIMS2-215ENST00000484252 NAA38Q9BRA0 125 aaKnown RBP14.91□□□□□ -0.02
LIMS2-215ENST00000484252 M0R381 172 aa14.91□□□□□ -0.02
LIMS2-215ENST00000484252 SUMO2P61956 95 aaKnown RBP14.91□□□□□ -0.02
LIMS2-215ENST00000484252 PHLDA3Q9Y5J5 127 aa14.91□□□□□ -0.02
LIMS2-215ENST00000484252 MED13LQ71F56 2210 aa14.9□□□□□ -0.02
LIMS2-215ENST00000484252 ITPR1Q14643 2758 aa14.9□□□□□ -0.02
LIMS2-215ENST00000484252 CSMD1Q96PZ7 3565 aa14.9□□□□□ -0.02
LIMS2-215ENST00000484252 TRBV25-1A0A075B6N4 114 aa14.9□□□□□ -0.02
LIMS2-215ENST00000484252 TMEM238LA0A1B0GVL6 79 aa14.9□□□□□ -0.02
LIMS2-215ENST00000484252 J3KRW8 73 aa14.9□□□□□ -0.02
LIMS2-215ENST00000484252 LY6EQ16553 131 aa14.9□□□□□ -0.02
LIMS2-215ENST00000484252 TEX48A0A1B0GUV7 120 aa14.89□□□□□ -0.03
LIMS2-215ENST00000484252 H3BUX3 64 aa14.89□□□□□ -0.03
LIMS2-215ENST00000484252 PPP1R17O96001 155 aa14.89□□□□□ -0.03
LIMS2-215ENST00000484252 IGHV4-38-2P0DP08 117 aa14.89□□□□□ -0.03
LIMS2-215ENST00000484252 PF4V1P10720 104 aa14.89□□□□□ -0.03
LIMS2-215ENST00000484252 GCSHP23434 173 aa14.89□□□□□ -0.03
LIMS2-215ENST00000484252 ANXA2RQ3ZCQ2 193 aa14.89□□□□□ -0.03
LIMS2-215ENST00000484252 ASH1LQ9NR48 2969 aaKnown RBP14.89□□□□□ -0.03
LIMS2-215ENST00000484252 F8W1H4 67 aa14.89□□□□□ -0.03
LIMS2-215ENST00000484252 H7C1H1 209 aa14.89□□□□□ -0.03
LIMS2-215ENST00000484252 RASL10AQ92737 203 aa14.89□□□□□ -0.03
LIMS2-215ENST00000484252 TOMM6Q96B49 74 aa14.89□□□□□ -0.03
LIMS2-215ENST00000484252 CCL19Q99731 98 aa14.89□□□□□ -0.03
LIMS2-215ENST00000484252 IGHV3-11P01762 117 aa14.88□□□□□ -0.03
LIMS2-215ENST00000484252 RPL11P62913 178 aaKnown RBP14.88□□□□□ -0.03
LIMS2-215ENST00000484252 FOXI2Q6ZQN5 318 aa14.88□□□□□ -0.03
LIMS2-215ENST00000484252 F8VRH5 84 aa14.88□□□□□ -0.03
LIMS2-215ENST00000484252 IGLV1-40P01703 118 aa14.88□□□□□ -0.03
LIMS2-215ENST00000484252 RNASE4P34096 147 aaKnown RBP14.88□□□□□ -0.03
LIMS2-215ENST00000484252 TAL2Q16559 108 aa14.88□□□□□ -0.03
LIMS2-215ENST00000484252 RHPN1-AS1Q9BWJ2 59 aa14.88□□□□□ -0.03
LIMS2-215ENST00000484252 TM2D2Q9BX73 214 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms