RNA–Protein interactions for RNA: ENST00000483955.1

SHROOM4-204, Transcript of shroom family member 4, humanhuman

TSL 2

Gene SHROOM4, Length 882 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-204ENST00000483955 XCL2Q9UBD3 114 aa6.6□□□□□ -1.35
SHROOM4-204ENST00000483955 DNAH3Q8TD57 4116 aa6.59□□□□□ -1.35
SHROOM4-204ENST00000483955 TRAV12-3A0A0B4J271 114 aa6.59□□□□□ -1.35
SHROOM4-204ENST00000483955 B4DEV8 164 aa6.59□□□□□ -1.35
SHROOM4-204ENST00000483955 K7EN84 100 aa6.59□□□□□ -1.35
SHROOM4-204ENST00000483955 M0R036 132 aa6.59□□□□□ -1.35
SHROOM4-204ENST00000483955 SH2D1AO60880 128 aa6.59□□□□□ -1.35
SHROOM4-204ENST00000483955 P01737 135 aa6.59□□□□□ -1.35
SHROOM4-204ENST00000483955 ZNF80P51504 273 aaPredicted RBP6.59□□□□□ -1.35
SHROOM4-204ENST00000483955 ERVFC1-1P60608 527 aa6.59□□□□□ -1.35
SHROOM4-204ENST00000483955 IBA57Q5T440 356 aaKnown RBP6.59□□□□□ -1.35
SHROOM4-204ENST00000483955 FAM231DQ6ZW35 169 aa6.59□□□□□ -1.35
SHROOM4-204ENST00000483955 Q6ZWC4 215 aa6.59□□□□□ -1.35
SHROOM4-204ENST00000483955 C15orf54Q8N8G6 183 aa6.59□□□□□ -1.35
SHROOM4-204ENST00000483955 MRAPQ8TCY5 172 aa6.59□□□□□ -1.35
SHROOM4-204ENST00000483955 ISOC2Q96AB3 205 aa6.59□□□□□ -1.35
SHROOM4-204ENST00000483955 KCNS1Q96KK3 526 aa6.59□□□□□ -1.35
SHROOM4-204ENST00000483955 TMEM208Q9BTX3 173 aa6.59□□□□□ -1.35
SHROOM4-204ENST00000483955 VWFP04275 2813 aa6.58□□□□□ -1.36
SHROOM4-204ENST00000483955 IGHV1OR15-1A0A075B7D0 117 aa6.58□□□□□ -1.36
SHROOM4-204ENST00000483955 XKRY2A2RUG3 117 aa6.58□□□□□ -1.36
SHROOM4-204ENST00000483955 C19orf71A6NCJ1 209 aa6.58□□□□□ -1.36
SHROOM4-204ENST00000483955 ZNF324O75467 553 aaPredicted RBP6.58□□□□□ -1.36
SHROOM4-204ENST00000483955 SNAPINO95295 136 aa6.58□□□□□ -1.36
SHROOM4-204ENST00000483955 APOC3P02656 99 aa6.58□□□□□ -1.36
SHROOM4-204ENST00000483955 PRB2P02812 416 aaPredicted RBP6.58□□□□□ -1.36
SHROOM4-204ENST00000483955 GIG44P09565 113 aaPredicted RBP6.58□□□□□ -1.36
SHROOM4-204ENST00000483955 OR5I1Q13606 314 aa6.58□□□□□ -1.36
SHROOM4-204ENST00000483955 KIR3DS1Q14943 382 aa6.58□□□□□ -1.36
SHROOM4-204ENST00000483955 FAM159AQ6UWV7 190 aa6.58□□□□□ -1.36
SHROOM4-204ENST00000483955 SFRP2Q96HF1 295 aa6.58□□□□□ -1.36
SHROOM4-204ENST00000483955 RCHY1Q96PM5 261 aa6.58□□□□□ -1.36
SHROOM4-204ENST00000483955 LINC01587Q99440 93 aa6.58□□□□□ -1.36
SHROOM4-204ENST00000483955 LINC00467Q9BRT7 94 aa6.58□□□□□ -1.36
SHROOM4-204ENST00000483955 OSTCQ9NRP0 149 aa6.58□□□□□ -1.36
SHROOM4-204ENST00000483955 TP53TG1Q9Y2A0 90 aa6.58□□□□□ -1.36
SHROOM4-204ENST00000483955 TRGV11A0A075B6L2 103 aa6.57□□□□□ -1.36
SHROOM4-204ENST00000483955 KRTAP4-8A0A0G2JLE6 195 aa6.57□□□□□ -1.36
SHROOM4-204ENST00000483955 ZNF705GA8MUZ8 300 aaPredicted RBP6.57□□□□□ -1.36
SHROOM4-204ENST00000483955 PPP1R2P9O14990 202 aa6.57□□□□□ -1.36
SHROOM4-204ENST00000483955 GATCO43716 136 aaKnown RBP6.57□□□□□ -1.36
SHROOM4-204ENST00000483955 ORM1P02763 201 aa6.57□□□□□ -1.36
SHROOM4-204ENST00000483955 CXCL1P09341 107 aa6.57□□□□□ -1.36
SHROOM4-204ENST00000483955 RBMY1A1P0DJD3 496 aaKnown RBP6.57□□□□□ -1.36
SHROOM4-204ENST00000483955 RBMY1CP0DJD4 496 aa6.57□□□□□ -1.36
SHROOM4-204ENST00000483955 CRIP1P50238 77 aa6.57□□□□□ -1.36
SHROOM4-204ENST00000483955 RPS20P60866 119 aaKnown RBP6.57□□□□□ -1.36
SHROOM4-204ENST00000483955 RHEBQ15382 184 aa6.57□□□□□ -1.36
SHROOM4-204ENST00000483955 RBMY1FQ15415 496 aaKnown RBP6.57□□□□□ -1.36
SHROOM4-204ENST00000483955 TDRG1Q3Y452 100 aa6.57□□□□□ -1.36
SHROOM4-204ENST00000483955 DEFB121Q5J5C9 76 aa6.57□□□□□ -1.36
SHROOM4-204ENST00000483955 ZNF705AQ6ZN79 300 aaPredicted RBP6.57□□□□□ -1.36
SHROOM4-204ENST00000483955 CSNK1G2-AS1Q8NCQ2 148 aa6.57□□□□□ -1.36
SHROOM4-204ENST00000483955 OR10G8Q8NGN5 311 aa6.57□□□□□ -1.36
SHROOM4-204ENST00000483955 RPP21Q9H633 154 aaKnown RBP6.57□□□□□ -1.36
SHROOM4-204ENST00000483955 NAGKQ9UJ70 344 aa6.57□□□□□ -1.36
SHROOM4-204ENST00000483955 NOTCH3Q9UM47 2321 aa6.57□□□□□ -1.36
SHROOM4-204ENST00000483955 AGRNO00468 2067 aa6.57□□□□□ -1.36
SHROOM4-204ENST00000483955 DNHD1Q96M86 4753 aa6.57□□□□□ -1.36
SHROOM4-204ENST00000483955 IGHV3OR16-12A0A075B7B8 117 aa6.56□□□□□ -1.36
SHROOM4-204ENST00000483955 TMEM189A5PLL7 270 aa6.56□□□□□ -1.36
SHROOM4-204ENST00000483955 SMIM9A6NGZ8 99 aa6.56□□□□□ -1.36
SHROOM4-204ENST00000483955 MT-ND4LP03901 98 aa6.56□□□□□ -1.36
SHROOM4-204ENST00000483955 DEFB135Q30KP9 77 aa6.56□□□□□ -1.36
SHROOM4-204ENST00000483955 ANXA2RQ3ZCQ2 193 aa6.56□□□□□ -1.36
SHROOM4-204ENST00000483955 MUC21Q5SSG8 566 aa6.56□□□□□ -1.36
SHROOM4-204ENST00000483955 C1orf158Q8N1D5 194 aa6.56□□□□□ -1.36
SHROOM4-204ENST00000483955 NUDT10Q8NFP7 164 aa6.56□□□□□ -1.36
SHROOM4-204ENST00000483955 OR2D3Q8NGH3 330 aa6.56□□□□□ -1.36
SHROOM4-204ENST00000483955 RNF183Q96D59 192 aa6.56□□□□□ -1.36
SHROOM4-204ENST00000483955 NUDT11Q96G61 164 aa6.56□□□□□ -1.36
SHROOM4-204ENST00000483955 C16orf74Q96GX8 76 aa6.56□□□□□ -1.36
SHROOM4-204ENST00000483955 NEU1Q99519 415 aa6.56□□□□□ -1.36
SHROOM4-204ENST00000483955 CTDSP1Q9GZU7 261 aa6.56□□□□□ -1.36
SHROOM4-204ENST00000483955 RNASE7Q9H1E1 156 aaKnown RBP6.56□□□□□ -1.36
SHROOM4-204ENST00000483955 IGKV3D-20A0A0C4DH25 116 aa6.55□□□□□ -1.36
SHROOM4-204ENST00000483955 CBY3A6NI87 242 aa6.55□□□□□ -1.36
SHROOM4-204ENST00000483955 A8MWL6 223 aa6.55□□□□□ -1.36
SHROOM4-204ENST00000483955 SPRY2O43597 315 aa6.55□□□□□ -1.36
SHROOM4-204ENST00000483955 ATP6V1G1O75348 118 aa6.55□□□□□ -1.36
SHROOM4-204ENST00000483955 S100A1P23297 94 aa6.55□□□□□ -1.36
SHROOM4-204ENST00000483955 DEFA6Q01524 100 aa6.55□□□□□ -1.36
SHROOM4-204ENST00000483955 ZNF415Q09FC8 603 aa6.55□□□□□ -1.36
SHROOM4-204ENST00000483955 RRN3P1Q2M238 152 aa6.55□□□□□ -1.36
SHROOM4-204ENST00000483955 RNF212Q495C1 297 aa6.55□□□□□ -1.36
SHROOM4-204ENST00000483955 ZNF493Q6ZR52 646 aa6.55□□□□□ -1.36
SHROOM4-204ENST00000483955 TMEM263Q8WUH6 116 aaKnown RBP6.55□□□□□ -1.36
SHROOM4-204ENST00000483955 SPATA25Q9BR10 227 aa6.55□□□□□ -1.36
SHROOM4-204ENST00000483955 A0A087WWC5 75 aa6.54□□□□□ -1.36
SHROOM4-204ENST00000483955 FAM231BA6NCW3 169 aa6.54□□□□□ -1.36
SHROOM4-204ENST00000483955 TYMSP04818 313 aa6.54□□□□□ -1.36
SHROOM4-204ENST00000483955 MED14OSP0DP75 135 aa6.54□□□□□ -1.36
SHROOM4-204ENST00000483955 MIFP14174 115 aa6.54□□□□□ -1.36
SHROOM4-204ENST00000483955 HTN1P15515 57 aa6.54□□□□□ -1.36
SHROOM4-204ENST00000483955 S100A4P26447 101 aaKnown RBP6.54□□□□□ -1.36
SHROOM4-204ENST00000483955 ASIPP42127 132 aa6.54□□□□□ -1.36
SHROOM4-204ENST00000483955 DNLZQ5SXM8 178 aa6.54□□□□□ -1.36
SHROOM4-204ENST00000483955 OR11H2Q8NH07 326 aa6.54□□□□□ -1.36
SHROOM4-204ENST00000483955 B9D2Q9BPU9 175 aa6.54□□□□□ -1.36
SHROOM4-204ENST00000483955 GFRA4Q9GZZ7 299 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms