RNA–Protein interactions for RNA: ENST00000483871.6

SRSF6-202, Transcript of serine and arginine rich splicing factor 6, humanhuman

TSL 2

Gene SRSF6, Length 1,680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-202ENST00000483871 ZNF575Q86XF7 245 aa10.18□□□□□ -0.78
SRSF6-202ENST00000483871 NEU1Q99519 415 aa10.18□□□□□ -0.78
SRSF6-202ENST00000483871 SDF2L1Q9HCN8 221 aa10.18□□□□□ -0.78
SRSF6-202ENST00000483871 NAT8Q9UHE5 227 aa10.18□□□□□ -0.78
SRSF6-202ENST00000483871 IGHV4-28A0A0C4DH34 117 aa10.17□□□□□ -0.78
SRSF6-202ENST00000483871 C19orf71A6NCJ1 209 aa10.17□□□□□ -0.78
SRSF6-202ENST00000483871 CBY3A6NI87 242 aa10.17□□□□□ -0.78
SRSF6-202ENST00000483871 RPL23P62829 140 aaKnown RBP10.17□□□□□ -0.78
SRSF6-202ENST00000483871 Q8NAQ8 132 aa10.17□□□□□ -0.78
SRSF6-202ENST00000483871 RNASE7Q9H1E1 156 aaKnown RBP10.17□□□□□ -0.78
SRSF6-202ENST00000483871 LY96Q9Y6Y9 160 aa10.17□□□□□ -0.78
SRSF6-202ENST00000483871 TMSB15BA0A087X1C1 80 aa10.16□□□□□ -0.78
SRSF6-202ENST00000483871 F8W036 122 aa10.16□□□□□ -0.78
SRSF6-202ENST00000483871 NHLRC4P0CG21 123 aaPredicted RBP10.16□□□□□ -0.78
SRSF6-202ENST00000483871 EMP1P54849 157 aa10.16□□□□□ -0.78
SRSF6-202ENST00000483871 ADIRFQ15847 76 aa10.16□□□□□ -0.78
SRSF6-202ENST00000483871 NUDT10Q8NFP7 164 aa10.16□□□□□ -0.78
SRSF6-202ENST00000483871 NUDT11Q96G61 164 aa10.16□□□□□ -0.78
SRSF6-202ENST00000483871 MDFICQ9P1T7 246 aa10.16□□□□□ -0.78
SRSF6-202ENST00000483871 SMIM9A6NGZ8 99 aa10.15□□□□□ -0.78
SRSF6-202ENST00000483871 TYMSP04818 313 aa10.15□□□□□ -0.78
SRSF6-202ENST00000483871 MIFP14174 115 aa10.15□□□□□ -0.78
SRSF6-202ENST00000483871 TDRG1Q3Y452 100 aa10.15□□□□□ -0.78
SRSF6-202ENST00000483871 RNASE8Q8TDE3 154 aaKnown RBP10.15□□□□□ -0.78
SRSF6-202ENST00000483871 DAZAP1Q96EP5 407 aaKnown RBP10.15□□□□□ -0.78
SRSF6-202ENST00000483871 LINC00467Q9BRT7 94 aa10.15□□□□□ -0.78
SRSF6-202ENST00000483871 PLAC8L1A1L4L8 177 aa10.15□□□□□ -0.79
SRSF6-202ENST00000483871 GRIFINA4D1Z8 144 aa10.15□□□□□ -0.79
SRSF6-202ENST00000483871 B4DEV8 164 aa10.15□□□□□ -0.79
SRSF6-202ENST00000483871 KRBOX1C9JBD0 128 aa10.15□□□□□ -0.79
SRSF6-202ENST00000483871 A0A0J9YWU9 116 aa10.14□□□□□ -0.79
SRSF6-202ENST00000483871 S100A1P23297 94 aa10.14□□□□□ -0.79
SRSF6-202ENST00000483871 LINC01559Q495D7 138 aa10.14□□□□□ -0.79
SRSF6-202ENST00000483871 IBA57Q5T440 356 aaKnown RBP10.14□□□□□ -0.79
SRSF6-202ENST00000483871 TMEM263Q8WUH6 116 aaKnown RBP10.14□□□□□ -0.79
SRSF6-202ENST00000483871 ISOC2Q96AB3 205 aa10.14□□□□□ -0.79
SRSF6-202ENST00000483871 KCNS1Q96KK3 526 aa10.14□□□□□ -0.79
SRSF6-202ENST00000483871 SEC11CQ9BY50 192 aa10.14□□□□□ -0.79
SRSF6-202ENST00000483871 BIN3Q9NQY0 253 aa10.14□□□□□ -0.79
SRSF6-202ENST00000483871 GSN-AS1Q9NRJ2 163 aa10.14□□□□□ -0.79
SRSF6-202ENST00000483871 TMEM189A5PLL7 270 aa10.13□□□□□ -0.79
SRSF6-202ENST00000483871 P01737 135 aa10.13□□□□□ -0.79
SRSF6-202ENST00000483871 ERVFC1-1P60608 527 aa10.13□□□□□ -0.79
SRSF6-202ENST00000483871 C11orf72Q8NBR9 251 aa10.13□□□□□ -0.79
SRSF6-202ENST00000483871 IGHV3-16A0A0C4DH30 117 aa10.12□□□□□ -0.79
SRSF6-202ENST00000483871 GZMBP10144 247 aa10.12□□□□□ -0.79
SRSF6-202ENST00000483871 OR2D3Q8NGH3 330 aa10.12□□□□□ -0.79
SRSF6-202ENST00000483871 C16orf74Q96GX8 76 aa10.12□□□□□ -0.79
SRSF6-202ENST00000483871 TRGV11A0A075B6L2 103 aa10.12□□□□□ -0.79
SRSF6-202ENST00000483871 RNASE3P12724 160 aaKnown RBP10.12□□□□□ -0.79
SRSF6-202ENST00000483871 NOP10Q9NPE3 64 aaKnown RBP10.12□□□□□ -0.79
SRSF6-202ENST00000483871 TIMM8BQ9Y5J9 83 aaPredicted RBP10.12□□□□□ -0.79
SRSF6-202ENST00000483871 U3KQK5 164 aa10.12□□□□□ -0.79
SRSF6-202ENST00000483871 C10orf91Q5T1B1 145 aa10.11□□□□□ -0.79
SRSF6-202ENST00000483871 ZNF493Q6ZR52 646 aa10.11□□□□□ -0.79
SRSF6-202ENST00000483871 FAM231DQ6ZW35 169 aa10.11□□□□□ -0.79
SRSF6-202ENST00000483871 SFRP2Q96HF1 295 aa10.11□□□□□ -0.79
SRSF6-202ENST00000483871 CELA1Q9UNI1 258 aa10.11□□□□□ -0.79
SRSF6-202ENST00000483871 SNURFLB1AK76 121 aa10.1□□□□□ -0.79
SRSF6-202ENST00000483871 GATCO43716 136 aaKnown RBP10.1□□□□□ -0.79
SRSF6-202ENST00000483871 S100A4P26447 101 aaKnown RBP10.1□□□□□ -0.79
SRSF6-202ENST00000483871 RPP21Q9H633 154 aaKnown RBP10.1□□□□□ -0.79
SRSF6-202ENST00000483871 OSTCQ9NRP0 149 aa10.1□□□□□ -0.79
SRSF6-202ENST00000483871 MUC4Q99102 2169 aa10.1□□□□□ -0.79
SRSF6-202ENST00000483871 H3BVH4 76 aa10.09□□□□□ -0.79
SRSF6-202ENST00000483871 ARMS2P0C7Q2 107 aa10.09□□□□□ -0.79
SRSF6-202ENST00000483871 ASIPP42127 132 aa10.09□□□□□ -0.79
SRSF6-202ENST00000483871 TCL1AP56279 114 aa10.09□□□□□ -0.79
SRSF6-202ENST00000483871 ZNF415Q09FC8 603 aa10.09□□□□□ -0.79
SRSF6-202ENST00000483871 FAM222AQ5U5X8 452 aa10.09□□□□□ -0.79
SRSF6-202ENST00000483871 IL17DQ8TAD2 202 aa10.09□□□□□ -0.79
SRSF6-202ENST00000483871 V9GYV3 84 aa10.09□□□□□ -0.79
SRSF6-202ENST00000483871 PNRC1Q12796 327 aaPredicted RBP10.09□□□□□ -0.79
SRSF6-202ENST00000483871 OR10G8Q8NGN5 311 aa10.09□□□□□ -0.79
SRSF6-202ENST00000483871 C11orf68Q9H3H3 251 aaKnown RBP10.09□□□□□ -0.79
SRSF6-202ENST00000483871 DKK2Q9UBU2 259 aa10.09□□□□□ -0.79
SRSF6-202ENST00000483871 CARHSP1Q9Y2V2 147 aaKnown RBP10.09□□□□□ -0.79
SRSF6-202ENST00000483871 TGP01266 2768 aa10.08□□□□□ -0.8
SRSF6-202ENST00000483871 MUC21A0A0G2JKD1 596 aa10.08□□□□□ -0.8
SRSF6-202ENST00000483871 MUC21A0A140T8X8 626 aa10.08□□□□□ -0.8
SRSF6-202ENST00000483871 APOC3P02656 99 aa10.08□□□□□ -0.8
SRSF6-202ENST00000483871 SSTP61278 116 aa10.08□□□□□ -0.8
SRSF6-202ENST00000483871 DAZ2Q13117 558 aaKnown RBP10.08□□□□□ -0.8
SRSF6-202ENST00000483871 C15orf54Q8N8G6 183 aa10.08□□□□□ -0.8
SRSF6-202ENST00000483871 C9orf85Q96MD7 179 aa10.08□□□□□ -0.8
SRSF6-202ENST00000483871 RNF212Q495C1 297 aa10.07□□□□□ -0.8
SRSF6-202ENST00000483871 DNLZQ5SXM8 178 aa10.07□□□□□ -0.8
SRSF6-202ENST00000483871 Q6ZTI0 123 aa10.07□□□□□ -0.8
SRSF6-202ENST00000483871 TPPP3Q9BW30 176 aa10.07□□□□□ -0.8
SRSF6-202ENST00000483871 EDA2RQ9HAV5 297 aa10.07□□□□□ -0.8
SRSF6-202ENST00000483871 MRPL16Q9NX20 251 aaKnown RBP10.07□□□□□ -0.8
SRSF6-202ENST00000483871 IL36BQ9NZH7 164 aa10.07□□□□□ -0.8
SRSF6-202ENST00000483871 DEFB130BP0DP73 79 aa10.06□□□□□ -0.8
SRSF6-202ENST00000483871 DEFB130AP0DP74 79 aa10.06□□□□□ -0.8
SRSF6-202ENST00000483871 RPS20P60866 119 aaKnown RBP10.06□□□□□ -0.8
SRSF6-202ENST00000483871 GTSF1Q8WW33 167 aa10.06□□□□□ -0.8
SRSF6-202ENST00000483871 TRGV1A0A0A0MS02 117 aa10.06□□□□□ -0.8
SRSF6-202ENST00000483871 GAGE12BA1L429 117 aa10.06□□□□□ -0.8
SRSF6-202ENST00000483871 XKRY2A2RUG3 117 aa10.06□□□□□ -0.8
SRSF6-202ENST00000483871 CXorf65A6NEN9 183 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms