RNA–Protein interactions for RNA: ENST00000483671.1

RFTN1-209, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 2

Gene RFTN1, Length 1,314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-209ENST00000483671 IGLL1P15814 213 aa11.92□□□□□ -0.5
RFTN1-209ENST00000483671 RPS10P46783 165 aaKnown RBP11.92□□□□□ -0.5
RFTN1-209ENST00000483671 PRR31Q5SQ13 230 aa11.92□□□□□ -0.5
RFTN1-209ENST00000483671 GTSCR1Q86UQ5 136 aa11.92□□□□□ -0.5
RFTN1-209ENST00000483671 CNFNQ9BYD5 112 aa11.92□□□□□ -0.5
RFTN1-209ENST00000483671 TMSB15BA0A087X1C1 80 aa11.91□□□□□ -0.5
RFTN1-209ENST00000483671 A0A1B0GW15 77 aa11.91□□□□□ -0.5
RFTN1-209ENST00000483671 MED14OSP0DP75 135 aa11.91□□□□□ -0.5
RFTN1-209ENST00000483671 FER1L6-AS1Q8NA97 138 aa11.91□□□□□ -0.5
RFTN1-209ENST00000483671 KCNS1Q96KK3 526 aa11.91□□□□□ -0.5
RFTN1-209ENST00000483671 PGLYRP4Q96LB8 373 aa11.91□□□□□ -0.5
RFTN1-209ENST00000483671 SSBP4Q9BWG4 385 aaPredicted RBP11.91□□□□□ -0.5
RFTN1-209ENST00000483671 TRRAPQ9Y4A5 3859 aa11.91□□□□□ -0.5
RFTN1-209ENST00000483671 TRAV12-2A0A075B6T6 113 aa11.9□□□□□ -0.5
RFTN1-209ENST00000483671 TRAV12-3A0A0B4J271 114 aa11.9□□□□□ -0.5
RFTN1-209ENST00000483671 A0A1B0GUT8 65 aa11.9□□□□□ -0.5
RFTN1-209ENST00000483671 F2Z2F3 143 aa11.9□□□□□ -0.5
RFTN1-209ENST00000483671 MT-ND6P03923 174 aa11.9□□□□□ -0.5
RFTN1-209ENST00000483671 OR5AL1P0C617 328 aa11.9□□□□□ -0.5
RFTN1-209ENST00000483671 NUTF2P61970 127 aaKnown RBP11.9□□□□□ -0.5
RFTN1-209ENST00000483671 ANXA2RQ3ZCQ2 193 aa11.9□□□□□ -0.5
RFTN1-209ENST00000483671 WDR73Q6P4I2 378 aa11.9□□□□□ -0.5
RFTN1-209ENST00000483671 LINC00467Q9BRT7 94 aa11.9□□□□□ -0.5
RFTN1-209ENST00000483671 GNB1LQ9BYB4 327 aa11.9□□□□□ -0.5
RFTN1-209ENST00000483671 PHOX2AO14813 284 aa11.89□□□□□ -0.51
RFTN1-209ENST00000483671 SNAI2O43623 268 aa11.89□□□□□ -0.51
RFTN1-209ENST00000483671 HBBP68871 147 aa11.89□□□□□ -0.51
RFTN1-209ENST00000483671 MRPL54Q6P161 138 aaKnown RBP11.89□□□□□ -0.51
RFTN1-209ENST00000483671 LYZL1Q6UWQ5 148 aa11.89□□□□□ -0.51
RFTN1-209ENST00000483671 FAM159AQ6UWV7 190 aa11.89□□□□□ -0.51
RFTN1-209ENST00000483671 GRIFINA4D1Z8 144 aa11.88□□□□□ -0.51
RFTN1-209ENST00000483671 INSP01308 110 aa11.88□□□□□ -0.51
RFTN1-209ENST00000483671 S100A8P05109 93 aa11.88□□□□□ -0.51
RFTN1-209ENST00000483671 RIGQ13278 110 aa11.88□□□□□ -0.51
RFTN1-209ENST00000483671 MORN3Q6PF18 240 aaPredicted RBP11.88□□□□□ -0.51
RFTN1-209ENST00000483671 TMEM136Q6ZRR5 245 aa11.88□□□□□ -0.51
RFTN1-209ENST00000483671 GATD1Q8NB37 220 aa11.88□□□□□ -0.51
RFTN1-209ENST00000483671 BORCS7Q96B45 105 aa11.88□□□□□ -0.51
RFTN1-209ENST00000483671 WFDC10AQ9H1F0 79 aa11.88□□□□□ -0.51
RFTN1-209ENST00000483671 SCRT2Q9NQ03 307 aa11.88□□□□□ -0.51
RFTN1-209ENST00000483671 NAGKQ9UJ70 344 aa11.88□□□□□ -0.51
RFTN1-209ENST00000483671 IGHV4-4A0A075B6R2 117 aa11.87□□□□□ -0.51
RFTN1-209ENST00000483671 IGHV1OR15-1A0A075B7D0 117 aa11.87□□□□□ -0.51
RFTN1-209ENST00000483671 C1orf196B1AJZ1 125 aa11.87□□□□□ -0.51
RFTN1-209ENST00000483671 SPINK4O60575 86 aa11.87□□□□□ -0.51
RFTN1-209ENST00000483671 ARMS2P0C7Q2 107 aa11.87□□□□□ -0.51
RFTN1-209ENST00000483671 FRMD6-AS1P0C7T7 363 aa11.87□□□□□ -0.51
RFTN1-209ENST00000483671 RBMY1A1P0DJD3 496 aaKnown RBP11.87□□□□□ -0.51
RFTN1-209ENST00000483671 RBMY1CP0DJD4 496 aa11.87□□□□□ -0.51
RFTN1-209ENST00000483671 ASIPP42127 132 aa11.87□□□□□ -0.51
RFTN1-209ENST00000483671 EGFEM1PQ0D2K5 195 aa11.87□□□□□ -0.51
RFTN1-209ENST00000483671 RBMY1FQ15415 496 aaKnown RBP11.87□□□□□ -0.51
RFTN1-209ENST00000483671 MUC21Q5SSG8 566 aa11.87□□□□□ -0.51
RFTN1-209ENST00000483671 ANK2Q01484 3957 aa11.87□□□□□ -0.51
RFTN1-209ENST00000483671 HLA-DQA1P01909 254 aa11.86□□□□□ -0.51
RFTN1-209ENST00000483671 TRGC2P03986 189 aa11.86□□□□□ -0.51
RFTN1-209ENST00000483671 FXYD7P58549 80 aa11.86□□□□□ -0.51
RFTN1-209ENST00000483671 Q8N1Y9 231 aa11.86□□□□□ -0.51
RFTN1-209ENST00000483671 TMEM256Q8N2U0 113 aa11.86□□□□□ -0.51
RFTN1-209ENST00000483671 ZMAT5Q9UDW3 170 aaKnown RBP11.86□□□□□ -0.51
RFTN1-209ENST00000483671 SNURFLB1AK76 121 aa11.86□□□□□ -0.51
RFTN1-209ENST00000483671 GIG44P09565 113 aaPredicted RBP11.86□□□□□ -0.51
RFTN1-209ENST00000483671 CACNG7P62955 275 aa11.86□□□□□ -0.51
RFTN1-209ENST00000483671 DEFB125Q8N687 156 aa11.86□□□□□ -0.51
RFTN1-209ENST00000483671 TPPP3Q9BW30 176 aa11.86□□□□□ -0.51
RFTN1-209ENST00000483671 C1QTNF4Q9BXJ3 329 aa11.86□□□□□ -0.51
RFTN1-209ENST00000483671 TRAPPC1Q9Y5R8 145 aa11.86□□□□□ -0.51
RFTN1-209ENST00000483671 RNASE3P12724 160 aaKnown RBP11.85□□□□□ -0.51
RFTN1-209ENST00000483671 RAB5BP61020 215 aa11.85□□□□□ -0.51
RFTN1-209ENST00000483671 ZNF493Q6ZR52 646 aa11.85□□□□□ -0.51
RFTN1-209ENST00000483671 MDFIQ99750 246 aa11.85□□□□□ -0.51
RFTN1-209ENST00000483671 TP53TG3Q9ULZ0 132 aa11.85□□□□□ -0.51
RFTN1-209ENST00000483671 TRGV11A0A075B6L2 103 aa11.84□□□□□ -0.51
RFTN1-209ENST00000483671 IGHV3-16A0A0C4DH30 117 aa11.84□□□□□ -0.51
RFTN1-209ENST00000483671 H3BVH4 76 aa11.84□□□□□ -0.51
RFTN1-209ENST00000483671 GNRH2O43555 120 aa11.84□□□□□ -0.51
RFTN1-209ENST00000483671 NXPH4O95158 308 aa11.84□□□□□ -0.51
RFTN1-209ENST00000483671 S100A4P26447 101 aaKnown RBP11.84□□□□□ -0.51
RFTN1-209ENST00000483671 CAMPP49913 170 aa11.84□□□□□ -0.51
RFTN1-209ENST00000483671 LURAP1LQ8IV03 231 aa11.84□□□□□ -0.51
RFTN1-209ENST00000483671 MRPL18Q9H0U6 180 aaKnown RBP11.84□□□□□ -0.51
RFTN1-209ENST00000483671 XCL2Q9UBD3 114 aa11.84□□□□□ -0.51
RFTN1-209ENST00000483671 FABP9Q0Z7S8 132 aa11.83□□□□□ -0.52
RFTN1-209ENST00000483671 OXLD1Q5BKU9 147 aa11.83□□□□□ -0.52
RFTN1-209ENST00000483671 C9orf85Q96MD7 179 aa11.83□□□□□ -0.52
RFTN1-209ENST00000483671 TMA7Q9Y2S6 64 aaKnown RBP11.83□□□□□ -0.52
RFTN1-209ENST00000483671 RPL35AP18077 110 aaKnown RBP11.82□□□□□ -0.52
RFTN1-209ENST00000483671 NTF3P20783 257 aa11.82□□□□□ -0.52
RFTN1-209ENST00000483671 RAB4BP61018 213 aa11.82□□□□□ -0.52
RFTN1-209ENST00000483671 C1orf158Q8N1D5 194 aa11.82□□□□□ -0.52
RFTN1-209ENST00000483671 CSNK1G2-AS1Q8NCQ2 148 aa11.82□□□□□ -0.52
RFTN1-209ENST00000483671 OR10AG1Q8NH19 301 aa11.82□□□□□ -0.52
RFTN1-209ENST00000483671 FRZBQ92765 325 aa11.82□□□□□ -0.52
RFTN1-209ENST00000483671 KIR2DL5BA0A0G2JN68 375 aa11.81□□□□□ -0.52
RFTN1-209ENST00000483671 KIR2DL5BA0A0G2JPC4 375 aa11.81□□□□□ -0.52
RFTN1-209ENST00000483671 APCSP02743 223 aa11.81□□□□□ -0.52
RFTN1-209ENST00000483671 TWIST1Q15672 202 aa11.81□□□□□ -0.52
RFTN1-209ENST00000483671 DMRTA1Q5VZB9 504 aa11.81□□□□□ -0.52
RFTN1-209ENST00000483671 KIR2DL5AQ8N109 375 aa11.81□□□□□ -0.52
RFTN1-209ENST00000483671 KIR2DL5BQ8NHK3 375 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms