RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 HSD17B11Q8NBQ5 300 aa13.57□□□□□ -0.24
HPS4-213ENST00000483631 PCNPQ8WW12 178 aaKnown RBP13.57□□□□□ -0.24
HPS4-213ENST00000483631 RAB24Q969Q5 203 aa13.57□□□□□ -0.24
HPS4-213ENST00000483631 TVP23CQ96ET8 276 aa13.57□□□□□ -0.24
HPS4-213ENST00000483631 SDF2L1Q9HCN8 221 aa13.57□□□□□ -0.24
HPS4-213ENST00000483631 NAGKQ9UJ70 344 aa13.57□□□□□ -0.24
HPS4-213ENST00000483631 HSPG2P98160 4391 aa13.57□□□□□ -0.24
HPS4-213ENST00000483631 TRAV9-2A0A087WT02 112 aa13.56□□□□□ -0.24
HPS4-213ENST00000483631 TRAV8-1A0A0A6YYK1 113 aa13.56□□□□□ -0.24
HPS4-213ENST00000483631 FBLL1A6NHQ2 334 aaKnown RBP13.56□□□□□ -0.24
HPS4-213ENST00000483631 K7EQM0 130 aa13.56□□□□□ -0.24
HPS4-213ENST00000483631 SFTA3P0C7M3 94 aa13.56□□□□□ -0.24
HPS4-213ENST00000483631 ATP6V0CP27449 155 aa13.56□□□□□ -0.24
HPS4-213ENST00000483631 TXNDC17Q9BRA2 123 aa13.56□□□□□ -0.24
HPS4-213ENST00000483631 TMEM167BQ9NRX6 74 aa13.56□□□□□ -0.24
HPS4-213ENST00000483631 TNFSF18Q9UNG2 199 aa13.56□□□□□ -0.24
HPS4-213ENST00000483631 C9JCJ5 164 aa13.55□□□□□ -0.24
HPS4-213ENST00000483631 HMGB3O15347 200 aaKnown RBP13.55□□□□□ -0.24
HPS4-213ENST00000483631 CIDEAO60543 219 aa13.55□□□□□ -0.24
HPS4-213ENST00000483631 TCRAP04437 139 aa13.55□□□□□ -0.24
HPS4-213ENST00000483631 TYMSP04818 313 aa13.55□□□□□ -0.24
HPS4-213ENST00000483631 GIPP09681 153 aaPredicted RBP13.55□□□□□ -0.24
HPS4-213ENST00000483631 GCHFRP30047 84 aa13.55□□□□□ -0.24
HPS4-213ENST00000483631 SH2D6Q7Z4S9 175 aa13.55□□□□□ -0.24
HPS4-213ENST00000483631 NFE4Q86UQ8 179 aa13.55□□□□□ -0.24
HPS4-213ENST00000483631 OR4C5Q8NGB2 326 aa13.55□□□□□ -0.24
HPS4-213ENST00000483631 F6UZH7 168 aa13.54□□□□□ -0.24
HPS4-213ENST00000483631 GNRH2O43555 120 aa13.54□□□□□ -0.24
HPS4-213ENST00000483631 GYPEP15421 78 aa13.54□□□□□ -0.24
HPS4-213ENST00000483631 GNG5P63218 68 aa13.54□□□□□ -0.24
HPS4-213ENST00000483631 LY96Q9Y6Y9 160 aa13.54□□□□□ -0.24
HPS4-213ENST00000483631 CXorf1O96002 111 aa13.53□□□□□ -0.24
HPS4-213ENST00000483631 INO80EQ8NBZ0 244 aaPredicted RBP13.53□□□□□ -0.24
HPS4-213ENST00000483631 ACTR3CQ9C0K3 210 aaPredicted RBP13.53□□□□□ -0.24
HPS4-213ENST00000483631 TAAR5O14804 337 aa13.52□□□□□ -0.25
HPS4-213ENST00000483631 TIRAPP58753 221 aa13.52□□□□□ -0.25
HPS4-213ENST00000483631 BOLA1Q9Y3E2 137 aa13.52□□□□□ -0.25
HPS4-213ENST00000483631 EREGO14944 169 aa13.51□□□□□ -0.25
HPS4-213ENST00000483631 DNAH10OSP0CZ25 163 aa13.51□□□□□ -0.25
HPS4-213ENST00000483631 KRTAP10-2P60368 255 aa13.51□□□□□ -0.25
HPS4-213ENST00000483631 CYB561D1Q8N8Q1 229 aa13.51□□□□□ -0.25
HPS4-213ENST00000483631 TMEM75Q8N9X5 138 aa13.51□□□□□ -0.25
HPS4-213ENST00000483631 PTH2Q96A98 100 aa13.51□□□□□ -0.25
HPS4-213ENST00000483631 EPDR1Q9UM22 224 aa13.51□□□□□ -0.25
HPS4-213ENST00000483631 PSG8Q9UQ74 426 aa13.51□□□□□ -0.25
HPS4-213ENST00000483631 A0A1W2PRE2 83 aa13.5□□□□□ -0.25
HPS4-213ENST00000483631 IGLV2-11P01706 119 aa13.5□□□□□ -0.25
HPS4-213ENST00000483631 PFN1P07737 140 aaKnown RBP13.5□□□□□ -0.25
HPS4-213ENST00000483631 GATA1P15976 413 aaPredicted RBP13.5□□□□□ -0.25
HPS4-213ENST00000483631 EVI2AP22794 236 aa13.5□□□□□ -0.25
HPS4-213ENST00000483631 ERVFC1-1P60608 527 aa13.5□□□□□ -0.25
HPS4-213ENST00000483631 SUMO1P63165 101 aaKnown RBP13.5□□□□□ -0.25
HPS4-213ENST00000483631 FLI1Q01543 452 aaPredicted RBP13.5□□□□□ -0.25
HPS4-213ENST00000483631 ZFP69Q49AA0 526 aa13.5□□□□□ -0.25
HPS4-213ENST00000483631 SAPCD1Q5SSQ6 148 aa13.5□□□□□ -0.25
HPS4-213ENST00000483631 PGPEP1Q9NXJ5 209 aa13.5□□□□□ -0.25
HPS4-213ENST00000483631 BORCS7-ASMTA0A0B4J1R7 106 aa13.49□□□□□ -0.25
HPS4-213ENST00000483631 GGTLC3B5MD39 225 aa13.49□□□□□ -0.25
HPS4-213ENST00000483631 SMUG1Q53HV7 270 aa13.49□□□□□ -0.25
HPS4-213ENST00000483631 Q5BKY6 102 aa13.49□□□□□ -0.25
HPS4-213ENST00000483631 CDPF1Q6NVV7 123 aa13.49□□□□□ -0.25
HPS4-213ENST00000483631 C10orf126Q8N4M7 172 aa13.49□□□□□ -0.25
HPS4-213ENST00000483631 SH3BGRL3Q9H299 93 aa13.49□□□□□ -0.25
HPS4-213ENST00000483631 DNAH5Q8TE73 4624 aa13.48□□□□□ -0.25
HPS4-213ENST00000483631 RNF222A6NCQ9 220 aa13.48□□□□□ -0.25
HPS4-213ENST00000483631 GCGP01275 180 aa13.48□□□□□ -0.25
HPS4-213ENST00000483631 ZNF876PQ49A33 203 aa13.48□□□□□ -0.25
HPS4-213ENST00000483631 MAPKAPK5-AS1Q8N8E1 139 aa13.48□□□□□ -0.25
HPS4-213ENST00000483631 SGK494Q96LW2 274 aa13.48□□□□□ -0.25
HPS4-213ENST00000483631 C9orf85Q96MD7 179 aa13.48□□□□□ -0.25
HPS4-213ENST00000483631 ZNF80P51504 273 aaPredicted RBP13.47□□□□□ -0.25
HPS4-213ENST00000483631 RPL7L1Q6DKI1 246 aaKnown RBP13.47□□□□□ -0.25
HPS4-213ENST00000483631 WFDC10BQ8IUB3 73 aa13.47□□□□□ -0.25
HPS4-213ENST00000483631 KRTAP4-5Q9BYR2 181 aa13.47□□□□□ -0.25
HPS4-213ENST00000483631 NKX6-2Q9C056 277 aaPredicted RBP13.47□□□□□ -0.25
HPS4-213ENST00000483631 MSRB1Q9NZV6 116 aa13.47□□□□□ -0.25
HPS4-213ENST00000483631 C11orf21Q9P2W6 132 aa13.47□□□□□ -0.25
HPS4-213ENST00000483631 APOBP04114 4563 aaKnown RBP13.47□□□□□ -0.25
HPS4-213ENST00000483631 CTXND1A0A1B0GTU2 59 aa13.46□□□□□ -0.25
HPS4-213ENST00000483631 TRBV6-4A0A1B0GX49 114 aa13.46□□□□□ -0.25
HPS4-213ENST00000483631 RS1O15537 224 aa13.46□□□□□ -0.25
HPS4-213ENST00000483631 PIK3CD-AS1Q5SR53 167 aa13.46□□□□□ -0.25
HPS4-213ENST00000483631 Q8N1X5 172 aa13.46□□□□□ -0.25
HPS4-213ENST00000483631 FXYD6-FXYD2A0A087WZ82 144 aa13.45□□□□□ -0.26
HPS4-213ENST00000483631 RHOHQ15669 191 aa13.45□□□□□ -0.26
HPS4-213ENST00000483631 CFAP126Q5VTH2 177 aa13.45□□□□□ -0.26
HPS4-213ENST00000483631 PRNTQ86SH4 94 aa13.45□□□□□ -0.26
HPS4-213ENST00000483631 PRADC1Q9BSG0 188 aa13.45□□□□□ -0.26
HPS4-213ENST00000483631 PPT1P50897 306 aa13.44□□□□□ -0.26
HPS4-213ENST00000483631 SLC25A29Q8N8R3 303 aa13.44□□□□□ -0.26
HPS4-213ENST00000483631 NHLRC2Q8NBF2 726 aa13.44□□□□□ -0.26
HPS4-213ENST00000483631 OR2T35Q8NGX2 323 aa13.44□□□□□ -0.26
HPS4-213ENST00000483631 CRYGDP07320 174 aa13.43□□□□□ -0.26
HPS4-213ENST00000483631 MGST1P10620 155 aaKnown RBP13.43□□□□□ -0.26
HPS4-213ENST00000483631 RNASE3P12724 160 aaKnown RBP13.43□□□□□ -0.26
HPS4-213ENST00000483631 HIST1H2BAQ96A08 127 aa13.43□□□□□ -0.26
HPS4-213ENST00000483631 TNFRSF18Q9Y5U5 241 aa13.43□□□□□ -0.26
HPS4-213ENST00000483631 A0A087WTM6 91 aa13.42□□□□□ -0.26
HPS4-213ENST00000483631 IGHV3-38A0A0C4DH36 116 aa13.42□□□□□ -0.26
HPS4-213ENST00000483631 LOC100131303A0A0U1RQF7 123 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms