RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 KMT2CQ8NEZ4 4911 aaKnown RBP11.05□□□□□ -0.64
RPP40-206ENST00000483546 ALKAL2Q6UX46 152 aa11.05□□□□□ -0.64
RPP40-206ENST00000483546 SPXQ9BT56 116 aa11.05□□□□□ -0.64
RPP40-206ENST00000483546 NAGKQ9UJ70 344 aa11.05□□□□□ -0.64
RPP40-206ENST00000483546 APLNQ9ULZ1 77 aa11.05□□□□□ -0.64
RPP40-206ENST00000483546 SPINK4O60575 86 aa11.04□□□□□ -0.64
RPP40-206ENST00000483546 LTAP01374 205 aa11.04□□□□□ -0.64
RPP40-206ENST00000483546 CCL20P78556 96 aa11.04□□□□□ -0.64
RPP40-206ENST00000483546 TMEM183AQ8IXX5 376 aa11.04□□□□□ -0.64
RPP40-206ENST00000483546 LINC00476Q8WZB0 136 aa11.04□□□□□ -0.64
RPP40-206ENST00000483546 GAGE12BA1L429 117 aa11.03□□□□□ -0.64
RPP40-206ENST00000483546 FABP5P3A8MUU1 101 aa11.03□□□□□ -0.64
RPP40-206ENST00000483546 GAGE7O76087 117 aa11.03□□□□□ -0.64
RPP40-206ENST00000483546 GAGE12FP0CL80 117 aa11.03□□□□□ -0.64
RPP40-206ENST00000483546 GAGE12GP0CL81 117 aa11.03□□□□□ -0.64
RPP40-206ENST00000483546 GAGE12IP0CL82 117 aa11.03□□□□□ -0.64
RPP40-206ENST00000483546 HTN3P15516 51 aa11.03□□□□□ -0.64
RPP40-206ENST00000483546 ZNF80P51504 273 aaPredicted RBP11.03□□□□□ -0.64
RPP40-206ENST00000483546 MEF2BQ02080 365 aaPredicted RBP11.03□□□□□ -0.64
RPP40-206ENST00000483546 LGALS9CQ6DKI2 356 aa11.03□□□□□ -0.64
RPP40-206ENST00000483546 C11orf52Q96A22 123 aa11.03□□□□□ -0.64
RPP40-206ENST00000483546 TRGV1A0A0A0MS02 117 aa11.02□□□□□ -0.65
RPP40-206ENST00000483546 SCO2A0A1W2PP80 73 aa11.02□□□□□ -0.65
RPP40-206ENST00000483546 PDE6DO43924 150 aa11.02□□□□□ -0.65
RPP40-206ENST00000483546 TYMSP04818 313 aa11.02□□□□□ -0.65
RPP40-206ENST00000483546 BCL2P10415 239 aa11.02□□□□□ -0.65
RPP40-206ENST00000483546 Q6ZTI0 123 aa11.02□□□□□ -0.65
RPP40-206ENST00000483546 C15orf53Q8NAA6 179 aa11.02□□□□□ -0.65
RPP40-206ENST00000483546 PLECQ15149 4684 aaKnown RBP11.02□□□□□ -0.65
RPP40-206ENST00000483546 TRGV2A0A075B6R0 118 aa11.01□□□□□ -0.65
RPP40-206ENST00000483546 IGHV3-16A0A0C4DH30 117 aa11.01□□□□□ -0.65
RPP40-206ENST00000483546 F5H768 121 aa11.01□□□□□ -0.65
RPP40-206ENST00000483546 LYPD6BQ8NI32 183 aa11.01□□□□□ -0.65
RPP40-206ENST00000483546 MDFICQ9P1T7 246 aa11.01□□□□□ -0.65
RPP40-206ENST00000483546 VAX2Q9UIW0 290 aa11.01□□□□□ -0.65
RPP40-206ENST00000483546 MUC4Q99102 2169 aa11□□□□□ -0.65
RPP40-206ENST00000483546 FAM162BQ5T6X4 162 aa11□□□□□ -0.65
RPP40-206ENST00000483546 DMRTA1Q5VZB9 504 aa11□□□□□ -0.65
RPP40-206ENST00000483546 RASL10AQ92737 203 aa11□□□□□ -0.65
RPP40-206ENST00000483546 ZC2HC1AQ96GY0 325 aa11□□□□□ -0.65
RPP40-206ENST00000483546 ALMS1Q8TCU4 4167 aa11□□□□□ -0.65
RPP40-206ENST00000483546 M0R2P5 195 aa10.99□□□□□ -0.65
RPP40-206ENST00000483546 GNRH2O43555 120 aa10.99□□□□□ -0.65
RPP40-206ENST00000483546 ZNF674Q2M3X9 581 aa10.99□□□□□ -0.65
RPP40-206ENST00000483546 TMEM88Q6PEY1 159 aa10.99□□□□□ -0.65
RPP40-206ENST00000483546 BAGE2Q86Y30 109 aa10.99□□□□□ -0.65
RPP40-206ENST00000483546 SMIM12Q96EX1 92 aa10.99□□□□□ -0.65
RPP40-206ENST00000483546 C11orf21Q9P2W6 132 aa10.99□□□□□ -0.65
RPP40-206ENST00000483546 H3BNG1 76 aa10.98□□□□□ -0.65
RPP40-206ENST00000483546 LY6G6CO95867 125 aa10.98□□□□□ -0.65
RPP40-206ENST00000483546 P0DMU3 169 aa10.98□□□□□ -0.65
RPP40-206ENST00000483546 FAM231AP0DMU4 169 aa10.98□□□□□ -0.65
RPP40-206ENST00000483546 FAM231CP0DMU5 169 aa10.98□□□□□ -0.65
RPP40-206ENST00000483546 RPL35P42766 123 aaKnown RBP10.98□□□□□ -0.65
RPP40-206ENST00000483546 LYSTQ99698 3801 aa10.98□□□□□ -0.65
RPP40-206ENST00000483546 MLST8Q9BVC4 326 aa10.98□□□□□ -0.65
RPP40-206ENST00000483546 MRPL16Q9NX20 251 aaKnown RBP10.98□□□□□ -0.65
RPP40-206ENST00000483546 SACSQ9NZJ4 4579 aa10.97□□□□□ -0.65
RPP40-206ENST00000483546 NDUFS6O75380 124 aaKnown RBP10.97□□□□□ -0.65
RPP40-206ENST00000483546 CRIP1P50238 77 aa10.97□□□□□ -0.65
RPP40-206ENST00000483546 SLAQ13239 276 aa10.97□□□□□ -0.65
RPP40-206ENST00000483546 DNLZQ5SXM8 178 aa10.97□□□□□ -0.65
RPP40-206ENST00000483546 PTH2Q96A98 100 aa10.97□□□□□ -0.65
RPP40-206ENST00000483546 C9orf85Q96MD7 179 aa10.97□□□□□ -0.65
RPP40-206ENST00000483546 DNAH1Q9P2D7 4330 aa10.97□□□□□ -0.65
RPP40-206ENST00000483546 IGKV3D-20A0A0C4DH25 116 aa10.96□□□□□ -0.65
RPP40-206ENST00000483546 SH2D1AO60880 128 aa10.96□□□□□ -0.65
RPP40-206ENST00000483546 ORM1P02763 201 aa10.96□□□□□ -0.65
RPP40-206ENST00000483546 ASIPP42127 132 aa10.96□□□□□ -0.65
RPP40-206ENST00000483546 OR5I1Q13606 314 aa10.96□□□□□ -0.65
RPP40-206ENST00000483546 LINC01559Q495D7 138 aa10.96□□□□□ -0.65
RPP40-206ENST00000483546 MED9Q9NWA0 146 aa10.96□□□□□ -0.65
RPP40-206ENST00000483546 B4DEV8 164 aa10.95□□□□□ -0.66
RPP40-206ENST00000483546 KRBOX1C9JBD0 128 aa10.95□□□□□ -0.66
RPP40-206ENST00000483546 CIDEAO60543 219 aa10.95□□□□□ -0.66
RPP40-206ENST00000483546 HOXA5P20719 270 aa10.95□□□□□ -0.66
RPP40-206ENST00000483546 S100A4P26447 101 aaKnown RBP10.95□□□□□ -0.66
RPP40-206ENST00000483546 PIK3CD-AS1Q5SR53 167 aa10.95□□□□□ -0.66
RPP40-206ENST00000483546 TEX261Q6UWH6 196 aa10.95□□□□□ -0.66
RPP40-206ENST00000483546 IL36BQ9NZH7 164 aa10.95□□□□□ -0.66
RPP40-206ENST00000483546 TRAV4A0A0B4J268 109 aa10.94□□□□□ -0.66
RPP40-206ENST00000483546 RBFOX3A6NFN3 312 aa10.94□□□□□ -0.66
RPP40-206ENST00000483546 TMEM250H0YL14 139 aa10.94□□□□□ -0.66
RPP40-206ENST00000483546 CXCL1P09341 107 aa10.94□□□□□ -0.66
RPP40-206ENST00000483546 RNASE3P12724 160 aaKnown RBP10.94□□□□□ -0.66
RPP40-206ENST00000483546 GNG4P50150 75 aa10.94□□□□□ -0.66
RPP40-206ENST00000483546 CENPWQ5EE01 88 aa10.94□□□□□ -0.66
RPP40-206ENST00000483546 ZNF506Q5JVG8 444 aa10.94□□□□□ -0.66
RPP40-206ENST00000483546 NHLRC2Q8NBF2 726 aa10.94□□□□□ -0.66
RPP40-206ENST00000483546 DERL1Q9BUN8 251 aa10.94□□□□□ -0.66
RPP40-206ENST00000483546 BIN3Q9NQY0 253 aa10.94□□□□□ -0.66
RPP40-206ENST00000483546 TRAV26-1A0A087WT03 109 aa10.93□□□□□ -0.66
RPP40-206ENST00000483546 RNF212Q495C1 297 aa10.93□□□□□ -0.66
RPP40-206ENST00000483546 ZNF876PQ49A33 203 aa10.93□□□□□ -0.66
RPP40-206ENST00000483546 PRO0255Q9UI72 69 aa10.93□□□□□ -0.66
RPP40-206ENST00000483546 M0R036 132 aa10.92□□□□□ -0.66
RPP40-206ENST00000483546 FAM3BP58499 235 aaPredicted RBP10.92□□□□□ -0.66
RPP40-206ENST00000483546 POM121L12Q8N7R1 296 aa10.92□□□□□ -0.66
RPP40-206ENST00000483546 OR4C5Q8NGB2 326 aa10.92□□□□□ -0.66
RPP40-206ENST00000483546 C9JCJ5 164 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms