RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 TMEM183BQ1AE95 376 aa12.61□□□□□ -0.39
HDAC6-225ENST00000483506 SMUG1Q53HV7 270 aa12.61□□□□□ -0.39
HDAC6-225ENST00000483506 Q86TA4 180 aa12.61□□□□□ -0.39
HDAC6-225ENST00000483506 SLC51BQ86UW2 128 aa12.61□□□□□ -0.39
HDAC6-225ENST00000483506 TMEM183AQ8IXX5 376 aa12.61□□□□□ -0.39
HDAC6-225ENST00000483506 KCNS1Q96KK3 526 aa12.61□□□□□ -0.39
HDAC6-225ENST00000483506 LINC00479Q96M42 142 aa12.61□□□□□ -0.39
HDAC6-225ENST00000483506 SPXQ9BT56 116 aa12.61□□□□□ -0.39
HDAC6-225ENST00000483506 TRGV2A0A075B6R0 118 aa12.6□□□□□ -0.39
HDAC6-225ENST00000483506 TRAV1-1A0A0B4J248 108 aa12.6□□□□□ -0.39
HDAC6-225ENST00000483506 TRAV34A0A0B4J273 112 aa12.6□□□□□ -0.39
HDAC6-225ENST00000483506 TRBV6-1A0A0K0K1D8 114 aa12.6□□□□□ -0.39
HDAC6-225ENST00000483506 H3BNG1 76 aa12.6□□□□□ -0.39
HDAC6-225ENST00000483506 GCGP01275 180 aa12.6□□□□□ -0.39
HDAC6-225ENST00000483506 RNF212Q495C1 297 aa12.6□□□□□ -0.39
HDAC6-225ENST00000483506 ZFP69Q49AA0 526 aa12.6□□□□□ -0.39
HDAC6-225ENST00000483506 COX8CQ7Z4L0 72 aa12.6□□□□□ -0.39
HDAC6-225ENST00000483506 C9orf62Q8N4C0 152 aa12.6□□□□□ -0.39
HDAC6-225ENST00000483506 NAGKQ9UJ70 344 aa12.6□□□□□ -0.39
HDAC6-225ENST00000483506 IGHV3-16A0A0C4DH30 117 aa12.59□□□□□ -0.39
HDAC6-225ENST00000483506 PAGE4O60829 102 aa12.59□□□□□ -0.39
HDAC6-225ENST00000483506 TYMSP04818 313 aa12.59□□□□□ -0.39
HDAC6-225ENST00000483506 SULT1A2P50226 295 aa12.59□□□□□ -0.39
HDAC6-225ENST00000483506 RASL10AQ92737 203 aa12.59□□□□□ -0.39
HDAC6-225ENST00000483506 FMC1Q96HJ9 113 aa12.59□□□□□ -0.39
HDAC6-225ENST00000483506 SDF2L1Q9HCN8 221 aa12.59□□□□□ -0.39
HDAC6-225ENST00000483506 C11orf21Q9P2W6 132 aa12.59□□□□□ -0.39
HDAC6-225ENST00000483506 CST9LP1Q5W188 147 aa12.58□□□□□ -0.4
HDAC6-225ENST00000483506 MRPL16Q9NX20 251 aaKnown RBP12.58□□□□□ -0.4
HDAC6-225ENST00000483506 DNAH10Q8IVF4 4471 aa12.57□□□□□ -0.4
HDAC6-225ENST00000483506 TRAV26-1A0A087WT03 109 aa12.57□□□□□ -0.4
HDAC6-225ENST00000483506 GNRH2O43555 120 aa12.57□□□□□ -0.4
HDAC6-225ENST00000483506 OR5I1Q13606 314 aa12.57□□□□□ -0.4
HDAC6-225ENST00000483506 ZFP30Q9Y2G7 519 aa12.57□□□□□ -0.4
HDAC6-225ENST00000483506 A0A1B0GVG6 124 aa12.56□□□□□ -0.4
HDAC6-225ENST00000483506 FAM3BP58499 235 aaPredicted RBP12.56□□□□□ -0.4
HDAC6-225ENST00000483506 NACAE9PAV3 2078 aa12.56□□□□□ -0.4
HDAC6-225ENST00000483506 A0A1B0GV50 99 aa12.55□□□□□ -0.4
HDAC6-225ENST00000483506 M0R2P5 195 aa12.55□□□□□ -0.4
HDAC6-225ENST00000483506 LTAP01374 205 aa12.55□□□□□ -0.4
HDAC6-225ENST00000483506 UBE2G1P62253 170 aa12.55□□□□□ -0.4
HDAC6-225ENST00000483506 MANBALQ9NQG1 85 aa12.55□□□□□ -0.4
HDAC6-225ENST00000483506 FRAS1Q86XX4 4008 aa12.55□□□□□ -0.4
HDAC6-225ENST00000483506 NUDT3O95989 172 aa12.54□□□□□ -0.4
HDAC6-225ENST00000483506 S100A9P06702 114 aaKnown RBP12.54□□□□□ -0.4
HDAC6-225ENST00000483506 AKR1C3P42330 323 aa12.54□□□□□ -0.4
HDAC6-225ENST00000483506 UBE2DNLQ8IWF7 75 aa12.54□□□□□ -0.4
HDAC6-225ENST00000483506 VSIG2Q96IQ7 327 aa12.54□□□□□ -0.4
HDAC6-225ENST00000483506 C9orf85Q96MD7 179 aa12.54□□□□□ -0.4
HDAC6-225ENST00000483506 FABP5P3A8MUU1 101 aa12.53□□□□□ -0.4
HDAC6-225ENST00000483506 CCL20P78556 96 aa12.53□□□□□ -0.4
HDAC6-225ENST00000483506 ZC2HC1AQ96GY0 325 aa12.53□□□□□ -0.4
HDAC6-225ENST00000483506 IGKV3D-20A0A0C4DH25 116 aa12.52□□□□□ -0.41
HDAC6-225ENST00000483506 A0A0J9YY99 117 aa12.52□□□□□ -0.41
HDAC6-225ENST00000483506 SCO2A0A1W2PP80 73 aa12.52□□□□□ -0.41
HDAC6-225ENST00000483506 TEX46H3BTG2 121 aa12.52□□□□□ -0.41
HDAC6-225ENST00000483506 CRIP1P50238 77 aa12.52□□□□□ -0.41
HDAC6-225ENST00000483506 SLAQ13239 276 aa12.52□□□□□ -0.41
HDAC6-225ENST00000483506 FHL2Q14192 279 aa12.52□□□□□ -0.41
HDAC6-225ENST00000483506 PTH2Q96A98 100 aa12.52□□□□□ -0.41
HDAC6-225ENST00000483506 TXNDC17Q9BRA2 123 aa12.52□□□□□ -0.41
HDAC6-225ENST00000483506 EPPK1P58107 5090 aaKnown RBP12.52□□□□□ -0.41
HDAC6-225ENST00000483506 TRAV4A0A0B4J268 109 aa12.51□□□□□ -0.41
HDAC6-225ENST00000483506 RNASE3P12724 160 aaKnown RBP12.51□□□□□ -0.41
HDAC6-225ENST00000483506 ZNF674Q2M3X9 581 aa12.51□□□□□ -0.41
HDAC6-225ENST00000483506 C11orf52Q96A22 123 aa12.51□□□□□ -0.41
HDAC6-225ENST00000483506 PRO0255Q9UI72 69 aa12.51□□□□□ -0.41
HDAC6-225ENST00000483506 IGHV3-53P01767 116 aa12.5□□□□□ -0.41
HDAC6-225ENST00000483506 CRYBA4P53673 196 aa12.5□□□□□ -0.41
HDAC6-225ENST00000483506 CCL18P55774 89 aa12.5□□□□□ -0.41
HDAC6-225ENST00000483506 DNLZQ5SXM8 178 aa12.5□□□□□ -0.41
HDAC6-225ENST00000483506 FAM162BQ5T6X4 162 aa12.5□□□□□ -0.41
HDAC6-225ENST00000483506 ZNF479Q96JC4 524 aa12.5□□□□□ -0.41
HDAC6-225ENST00000483506 GNG13Q9P2W3 67 aa12.5□□□□□ -0.41
HDAC6-225ENST00000483506 LINC00588Q9Y4M8 146 aa12.5□□□□□ -0.41
HDAC6-225ENST00000483506 DNAH2Q9P225 4427 aa12.5□□□□□ -0.41
HDAC6-225ENST00000483506 A0A096LPF7 62 aa12.49□□□□□ -0.41
HDAC6-225ENST00000483506 SH2D1AO60880 128 aa12.49□□□□□ -0.41
HDAC6-225ENST00000483506 MLST8Q9BVC4 326 aa12.49□□□□□ -0.41
HDAC6-225ENST00000483506 KRBOX1C9JBD0 128 aa12.48□□□□□ -0.41
HDAC6-225ENST00000483506 PAX4O43316 350 aa12.48□□□□□ -0.41
HDAC6-225ENST00000483506 SFTA3P0C7M3 94 aa12.48□□□□□ -0.41
HDAC6-225ENST00000483506 PIK3CD-AS1Q5SR53 167 aa12.48□□□□□ -0.41
HDAC6-225ENST00000483506 Q6ZR54 194 aa12.48□□□□□ -0.41
HDAC6-225ENST00000483506 ZNRF2Q8NHG8 242 aa12.48□□□□□ -0.41
HDAC6-225ENST00000483506 HHLA3Q9XRX5 114 aa12.48□□□□□ -0.41
HDAC6-225ENST00000483506 LINC01559Q495D7 138 aa12.47□□□□□ -0.41
HDAC6-225ENST00000483506 ZNF876PQ49A33 203 aa12.47□□□□□ -0.41
HDAC6-225ENST00000483506 ZNF575Q86XF7 245 aa12.47□□□□□ -0.41
HDAC6-225ENST00000483506 OR4C5Q8NGB2 326 aa12.47□□□□□ -0.41
HDAC6-225ENST00000483506 TRGV4A0A0C4DH28 118 aa12.46□□□□□ -0.41
HDAC6-225ENST00000483506 B4DEV8 164 aa12.46□□□□□ -0.41
HDAC6-225ENST00000483506 CIDEAO60543 219 aa12.46□□□□□ -0.41
HDAC6-225ENST00000483506 IFNA1P01562 189 aa12.46□□□□□ -0.41
HDAC6-225ENST00000483506 ORM1P02763 201 aa12.46□□□□□ -0.41
HDAC6-225ENST00000483506 BCL2P10415 239 aa12.46□□□□□ -0.41
HDAC6-225ENST00000483506 ASIPP42127 132 aa12.46□□□□□ -0.41
HDAC6-225ENST00000483506 MEF2BQ02080 365 aaPredicted RBP12.46□□□□□ -0.41
HDAC6-225ENST00000483506 UPK3BQ9BT76 320 aa12.46□□□□□ -0.41
HDAC6-225ENST00000483506 IL36BQ9NZH7 164 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms