RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 GAGE12GP0CL81 117 aa11.73□□□□□ -0.53
HMGN1-214ENST00000482733 GAGE12IP0CL82 117 aa11.73□□□□□ -0.53
HMGN1-214ENST00000482733 AKR1C3P42330 323 aa11.73□□□□□ -0.53
HMGN1-214ENST00000482733 LGALS9BQ3B8N2 356 aa11.73□□□□□ -0.53
HMGN1-214ENST00000482733 LGALS9CQ6DKI2 356 aa11.73□□□□□ -0.53
HMGN1-214ENST00000482733 C18orf15Q96N68 181 aa11.73□□□□□ -0.53
HMGN1-214ENST00000482733 TXNDC17Q9BRA2 123 aa11.73□□□□□ -0.53
HMGN1-214ENST00000482733 SDF2L1Q9HCN8 221 aa11.73□□□□□ -0.53
HMGN1-214ENST00000482733 LY6G6CO95867 125 aa11.72□□□□□ -0.53
HMGN1-214ENST00000482733 IFNA1P01562 189 aa11.72□□□□□ -0.53
HMGN1-214ENST00000482733 NKX2-5P52952 324 aaPredicted RBP11.72□□□□□ -0.53
HMGN1-214ENST00000482733 CCL20P78556 96 aa11.72□□□□□ -0.53
HMGN1-214ENST00000482733 TMEM183BQ1AE95 376 aa11.72□□□□□ -0.53
HMGN1-214ENST00000482733 Q6ZTI0 123 aa11.72□□□□□ -0.53
HMGN1-214ENST00000482733 TMEM183AQ8IXX5 376 aa11.72□□□□□ -0.53
HMGN1-214ENST00000482733 SPXQ9BT56 116 aa11.72□□□□□ -0.53
HMGN1-214ENST00000482733 GNG13Q9P2W3 67 aa11.72□□□□□ -0.53
HMGN1-214ENST00000482733 TRGV1A0A0A0MS02 117 aa11.71□□□□□ -0.53
HMGN1-214ENST00000482733 F5H768 121 aa11.71□□□□□ -0.53
HMGN1-214ENST00000482733 ZNF80P51504 273 aaPredicted RBP11.71□□□□□ -0.53
HMGN1-214ENST00000482733 COX8CQ7Z4L0 72 aa11.71□□□□□ -0.53
HMGN1-214ENST00000482733 MDFICQ9P1T7 246 aa11.71□□□□□ -0.53
HMGN1-214ENST00000482733 TRGV2A0A075B6R0 118 aa11.7□□□□□ -0.54
HMGN1-214ENST00000482733 FABP5P3A8MUU1 101 aa11.7□□□□□ -0.54
HMGN1-214ENST00000482733 LTAP01374 205 aa11.7□□□□□ -0.54
HMGN1-214ENST00000482733 TAGLN2P37802 199 aaKnown RBP11.7□□□□□ -0.54
HMGN1-214ENST00000482733 BLOC1S1P78537 153 aa11.7□□□□□ -0.54
HMGN1-214ENST00000482733 TMEM88Q6PEY1 159 aa11.7□□□□□ -0.54
HMGN1-214ENST00000482733 ALKAL2Q6UX46 152 aa11.7□□□□□ -0.54
HMGN1-214ENST00000482733 C15orf53Q8NAA6 179 aa11.7□□□□□ -0.54
HMGN1-214ENST00000482733 VPS13DQ5THJ4 4388 aa11.7□□□□□ -0.54
HMGN1-214ENST00000482733 IGHV3-16A0A0C4DH30 117 aa11.69□□□□□ -0.54
HMGN1-214ENST00000482733 SCO2A0A1W2PP80 73 aa11.69□□□□□ -0.54
HMGN1-214ENST00000482733 GNRH2O43555 120 aa11.69□□□□□ -0.54
HMGN1-214ENST00000482733 TYMSP04818 313 aa11.69□□□□□ -0.54
HMGN1-214ENST00000482733 BOLA1Q9Y3E2 137 aa11.68□□□□□ -0.54
HMGN1-214ENST00000482733 HYDINQ4G0P3 5121 aa11.67□□□□□ -0.54
HMGN1-214ENST00000482733 P0DMU3 169 aa11.67□□□□□ -0.54
HMGN1-214ENST00000482733 FAM231AP0DMU4 169 aa11.67□□□□□ -0.54
HMGN1-214ENST00000482733 FAM231CP0DMU5 169 aa11.67□□□□□ -0.54
HMGN1-214ENST00000482733 RASL10AQ92737 203 aa11.67□□□□□ -0.54
HMGN1-214ENST00000482733 C11orf52Q96A22 123 aa11.67□□□□□ -0.54
HMGN1-214ENST00000482733 ZC2HC1AQ96GY0 325 aa11.67□□□□□ -0.54
HMGN1-214ENST00000482733 MRPL16Q9NX20 251 aaKnown RBP11.67□□□□□ -0.54
HMGN1-214ENST00000482733 C11orf21Q9P2W6 132 aa11.67□□□□□ -0.54
HMGN1-214ENST00000482733 M0R2P5 195 aa11.66□□□□□ -0.54
HMGN1-214ENST00000482733 PDE6DO43924 150 aa11.66□□□□□ -0.54
HMGN1-214ENST00000482733 BCL2P10415 239 aa11.66□□□□□ -0.54
HMGN1-214ENST00000482733 MEF2BQ02080 365 aaPredicted RBP11.66□□□□□ -0.54
HMGN1-214ENST00000482733 OR5I1Q13606 314 aa11.66□□□□□ -0.54
HMGN1-214ENST00000482733 FAM162BQ5T6X4 162 aa11.66□□□□□ -0.54
HMGN1-214ENST00000482733 VAX2Q9UIW0 290 aa11.66□□□□□ -0.54
HMGN1-214ENST00000482733 CRIP1P50238 77 aa11.65□□□□□ -0.54
HMGN1-214ENST00000482733 BAGE2Q86Y30 109 aa11.65□□□□□ -0.54
HMGN1-214ENST00000482733 H3BNG1 76 aa11.64□□□□□ -0.55
HMGN1-214ENST00000482733 SH2D1AO60880 128 aa11.64□□□□□ -0.55
HMGN1-214ENST00000482733 ORM1P02763 201 aa11.64□□□□□ -0.55
HMGN1-214ENST00000482733 HOXA5P20719 270 aa11.64□□□□□ -0.55
HMGN1-214ENST00000482733 RPL35P42766 123 aaKnown RBP11.64□□□□□ -0.55
HMGN1-214ENST00000482733 ZNF674Q2M3X9 581 aa11.64□□□□□ -0.55
HMGN1-214ENST00000482733 TRAV26-1A0A087WT03 109 aa11.63□□□□□ -0.55
HMGN1-214ENST00000482733 IGKV3D-20A0A0C4DH25 116 aa11.63□□□□□ -0.55
HMGN1-214ENST00000482733 B4DEV8 164 aa11.63□□□□□ -0.55
HMGN1-214ENST00000482733 SLAQ13239 276 aa11.63□□□□□ -0.55
HMGN1-214ENST00000482733 LYPD6BQ8NI32 183 aa11.63□□□□□ -0.55
HMGN1-214ENST00000482733 MLST8Q9BVC4 326 aa11.63□□□□□ -0.55
HMGN1-214ENST00000482733 S100A4P26447 101 aaKnown RBP11.62□□□□□ -0.55
HMGN1-214ENST00000482733 ASIPP42127 132 aa11.62□□□□□ -0.55
HMGN1-214ENST00000482733 NHLRC2Q8NBF2 726 aa11.62□□□□□ -0.55
HMGN1-214ENST00000482733 PTH2Q96A98 100 aa11.62□□□□□ -0.55
HMGN1-214ENST00000482733 C9orf85Q96MD7 179 aa11.62□□□□□ -0.55
HMGN1-214ENST00000482733 MED9Q9NWA0 146 aa11.62□□□□□ -0.55
HMGN1-214ENST00000482733 TRAV4A0A0B4J268 109 aa11.61□□□□□ -0.55
HMGN1-214ENST00000482733 KRBOX1C9JBD0 128 aa11.61□□□□□ -0.55
HMGN1-214ENST00000482733 NUDT3O95989 172 aa11.61□□□□□ -0.55
HMGN1-214ENST00000482733 RNF212Q495C1 297 aa11.61□□□□□ -0.55
HMGN1-214ENST00000482733 LINC01559Q495D7 138 aa11.61□□□□□ -0.55
HMGN1-214ENST00000482733 DNLZQ5SXM8 178 aa11.61□□□□□ -0.55
HMGN1-214ENST00000482733 POM121L12Q8N7R1 296 aa11.61□□□□□ -0.55
HMGN1-214ENST00000482733 SMIM12Q96EX1 92 aa11.61□□□□□ -0.55
HMGN1-214ENST00000482733 IGHV3-53P01767 116 aa11.6□□□□□ -0.55
HMGN1-214ENST00000482733 RNASE3P12724 160 aaKnown RBP11.6□□□□□ -0.55
HMGN1-214ENST00000482733 ZNF876PQ49A33 203 aa11.6□□□□□ -0.55
HMGN1-214ENST00000482733 UBE2DNLQ8IWF7 75 aa11.6□□□□□ -0.55
HMGN1-214ENST00000482733 OR4C5Q8NGB2 326 aa11.6□□□□□ -0.55
HMGN1-214ENST00000482733 DERL1Q9BUN8 251 aa11.6□□□□□ -0.55
HMGN1-214ENST00000482733 PRO0255Q9UI72 69 aa11.6□□□□□ -0.55
HMGN1-214ENST00000482733 TRGV4A0A0C4DH28 118 aa11.59□□□□□ -0.55
HMGN1-214ENST00000482733 A0A0J9YY99 117 aa11.59□□□□□ -0.55
HMGN1-214ENST00000482733 RBFOX3A6NFN3 312 aa11.59□□□□□ -0.55
HMGN1-214ENST00000482733 C9JCJ5 164 aa11.59□□□□□ -0.55
HMGN1-214ENST00000482733 M0R036 132 aa11.59□□□□□ -0.55
HMGN1-214ENST00000482733 CIDEAO60543 219 aa11.59□□□□□ -0.55
HMGN1-214ENST00000482733 FHL2Q14192 279 aa11.59□□□□□ -0.55
HMGN1-214ENST00000482733 CENPWQ5EE01 88 aa11.59□□□□□ -0.55
HMGN1-214ENST00000482733 PIK3CD-AS1Q5SR53 167 aa11.59□□□□□ -0.55
HMGN1-214ENST00000482733 IL36BQ9NZH7 164 aa11.59□□□□□ -0.55
HMGN1-214ENST00000482733 HHLA3Q9XRX5 114 aa11.59□□□□□ -0.55
HMGN1-214ENST00000482733 DNAH6Q9C0G6 4158 aa11.58□□□□□ -0.56
HMGN1-214ENST00000482733 GNG4P50150 75 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms