RNA–Protein interactions for RNA: ENST00000480548.5

SGIP1-209, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 5

Gene SGIP1, Length 801 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-209ENST00000480548 TMEM242Q9NWH2 141 aa2.85□□□□□ -1.95
SGIP1-209ENST00000480548 WDR97A6NE52 1622 aa2.85□□□□□ -1.95
SGIP1-209ENST00000480548 BRWD1Q9NSI6 2320 aa2.85□□□□□ -1.95
SGIP1-209ENST00000480548 LAMB4A4D0S4 1761 aa2.84□□□□□ -1.95
SGIP1-209ENST00000480548 CFTRP13569 1480 aa2.84□□□□□ -1.95
SGIP1-209ENST00000480548 MYOM2P54296 1465 aa2.84□□□□□ -1.95
SGIP1-209ENST00000480548 TRAV2A0A0B4J234 112 aa2.84□□□□□ -1.95
SGIP1-209ENST00000480548 APOC4-APOC2K7ER74 178 aa2.84□□□□□ -1.95
SGIP1-209ENST00000480548 GEMIN2O14893 280 aaKnown RBP2.84□□□□□ -1.95
SGIP1-209ENST00000480548 CCL25O15444 150 aa2.84□□□□□ -1.95
SGIP1-209ENST00000480548 IGHV3-33P01772 117 aa2.84□□□□□ -1.95
SGIP1-209ENST00000480548 APOC2P02655 101 aa2.84□□□□□ -1.95
SGIP1-209ENST00000480548 IGKV4-1P06312 121 aa2.84□□□□□ -1.95
SGIP1-209ENST00000480548 PIRTP0C851 137 aa2.84□□□□□ -1.95
SGIP1-209ENST00000480548 C8orf59Q8N0T1 100 aaPredicted RBP2.84□□□□□ -1.95
SGIP1-209ENST00000480548 LSM10Q969L4 123 aaKnown RBP2.84□□□□□ -1.95
SGIP1-209ENST00000480548 SPTSSAQ969W0 71 aa2.84□□□□□ -1.95
SGIP1-209ENST00000480548 MRPL57Q9BQC6 102 aaKnown RBP2.84□□□□□ -1.95
SGIP1-209ENST00000480548 KTN1Q86UP2 1357 aaKnown RBP2.84□□□□□ -1.96
SGIP1-209ENST00000480548 RTTNQ86VV8 2226 aa2.84□□□□□ -1.96
SGIP1-209ENST00000480548 CNTLNQ9NXG0 1405 aa2.84□□□□□ -1.96
SGIP1-209ENST00000480548 COL4A5P29400 1685 aa2.83□□□□□ -1.96
SGIP1-209ENST00000480548 TRAV17A0A0B4J275 112 aa2.83□□□□□ -1.96
SGIP1-209ENST00000480548 TRBV6-5A0A0K0K1A5 114 aa2.83□□□□□ -1.96
SGIP1-209ENST00000480548 H3BRM9 83 aa2.83□□□□□ -1.96
SGIP1-209ENST00000480548 SNCGO76070 127 aa2.83□□□□□ -1.96
SGIP1-209ENST00000480548 RNASE3P12724 160 aaKnown RBP2.83□□□□□ -1.96
SGIP1-209ENST00000480548 BRD3OSQ6XYD6 125 aa2.83□□□□□ -1.96
SGIP1-209ENST00000480548 ACBD7Q8N6N7 88 aa2.83□□□□□ -1.96
SGIP1-209ENST00000480548 REG4Q9BYZ8 158 aa2.83□□□□□ -1.96
SGIP1-209ENST00000480548 RPRMQ9NS64 109 aa2.83□□□□□ -1.96
SGIP1-209ENST00000480548 KLK9Q9UKQ9 250 aa2.83□□□□□ -1.96
SGIP1-209ENST00000480548 VPS8Q8N3P4 1428 aa2.83□□□□□ -1.96
SGIP1-209ENST00000480548 NDUFB6O95139 128 aa2.82□□□□□ -1.96
SGIP1-209ENST00000480548 Q6AWC8 147 aa2.82□□□□□ -1.96
SGIP1-209ENST00000480548 MYH9P35579 1960 aaKnown RBP2.81□□□□□ -1.96
SGIP1-209ENST00000480548 TRAV30A0A087WSZ9 112 aa2.81□□□□□ -1.96
SGIP1-209ENST00000480548 PRB4P10163 310 aaPredicted RBP2.81□□□□□ -1.96
SGIP1-209ENST00000480548 PIPP12273 146 aaPredicted RBP2.81□□□□□ -1.96
SGIP1-209ENST00000480548 POLR2JP52435 117 aaKnown RBP2.81□□□□□ -1.96
SGIP1-209ENST00000480548 HSD52Q0P140 79 aa2.81□□□□□ -1.96
SGIP1-209ENST00000480548 RHOHQ15669 191 aa2.81□□□□□ -1.96
SGIP1-209ENST00000480548 SPANXN1Q5VSR9 72 aa2.81□□□□□ -1.96
SGIP1-209ENST00000480548 Q6ZRN7 208 aaPredicted RBP2.81□□□□□ -1.96
SGIP1-209ENST00000480548 CDC42SE1Q9NRR8 79 aa2.81□□□□□ -1.96
SGIP1-209ENST00000480548 PZPP20742 1482 aa2.81□□□□□ -1.96
SGIP1-209ENST00000480548 MED12LQ86YW9 2145 aa2.81□□□□□ -1.96
SGIP1-209ENST00000480548 BAZ2BQ9UIF8 2168 aaKnown RBP2.81□□□□□ -1.96
SGIP1-209ENST00000480548 FN1P02751 2386 aaKnown RBP2.8□□□□□ -1.96
SGIP1-209ENST00000480548 ATG2AQ2TAZ0 1938 aa2.8□□□□□ -1.96
SGIP1-209ENST00000480548 TRBV6-4A0A1B0GX49 114 aa2.8□□□□□ -1.96
SGIP1-209ENST00000480548 J3QRE1 110 aa2.8□□□□□ -1.96
SGIP1-209ENST00000480548 IL7P13232 177 aa2.8□□□□□ -1.96
SGIP1-209ENST00000480548 C9orf153Q5TBE3 101 aa2.8□□□□□ -1.96
SGIP1-209ENST00000480548 UNQ5815/PRO19632Q6UWF5 114 aa2.8□□□□□ -1.96
SGIP1-209ENST00000480548 Q6ZS92 163 aa2.8□□□□□ -1.96
SGIP1-209ENST00000480548 PPDPFLQ8WWR9 84 aa2.8□□□□□ -1.96
SGIP1-209ENST00000480548 NDUFA12Q9UI09 145 aa2.8□□□□□ -1.96
SGIP1-209ENST00000480548 KIDINS220Q9ULH0 1771 aa2.79□□□□□ -1.96
SGIP1-209ENST00000480548 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.79□□□□□ -1.96
SGIP1-209ENST00000480548 FREM1Q5H8C1 2179 aa2.79□□□□□ -1.96
SGIP1-209ENST00000480548 M0R143 59 aa2.79□□□□□ -1.96
SGIP1-209ENST00000480548 IFNA17P01571 189 aa2.79□□□□□ -1.96
SGIP1-209ENST00000480548 SVBPQ8N300 66 aa2.79□□□□□ -1.96
SGIP1-209ENST00000480548 HEATR1Q9H583 2144 aaKnown RBP2.79□□□□□ -1.96
SGIP1-209ENST00000480548 ICE1Q9Y2F5 2266 aa2.79□□□□□ -1.96
SGIP1-209ENST00000480548 MDC1Q14676 2089 aaKnown RBP2.78□□□□□ -1.96
SGIP1-209ENST00000480548 TMEM30CPA0ZSE6 113 aa2.78□□□□□ -1.96
SGIP1-209ENST00000480548 NUPR1O60356 82 aa2.78□□□□□ -1.96
SGIP1-209ENST00000480548 IGKCP01834 107 aa2.78□□□□□ -1.96
SGIP1-209ENST00000480548 IFITM1P13164 125 aa2.78□□□□□ -1.96
SGIP1-209ENST00000480548 KRTAP13-3Q3SY46 172 aa2.78□□□□□ -1.96
SGIP1-209ENST00000480548 LINC00526Q96FQ7 95 aa2.78□□□□□ -1.96
SGIP1-209ENST00000480548 LAMB2P55268 1798 aa2.78□□□□□ -1.96
SGIP1-209ENST00000480548 DOCK10Q96BY6 2186 aa2.78□□□□□ -1.96
SGIP1-209ENST00000480548 CECR2Q9BXF3 1484 aa2.77□□□□□ -1.97
SGIP1-209ENST00000480548 OOSP1A8MZH6 123 aa2.77□□□□□ -1.97
SGIP1-209ENST00000480548 SPINK8P0C7L1 97 aa2.77□□□□□ -1.97
SGIP1-209ENST00000480548 SLC25A6P12236 298 aa2.77□□□□□ -1.97
SGIP1-209ENST00000480548 IQCJQ1A5X6 159 aa2.77□□□□□ -1.97
SGIP1-209ENST00000480548 NCMAPQ5T1S8 102 aa2.77□□□□□ -1.97
SGIP1-209ENST00000480548 CSAG1Q6PB30 78 aa2.77□□□□□ -1.97
SGIP1-209ENST00000480548 LYPD5Q6UWN5 251 aa2.77□□□□□ -1.97
SGIP1-209ENST00000480548 TMEM141Q96I45 108 aa2.77□□□□□ -1.97
SGIP1-209ENST00000480548 PLXNA4Q9HCM2 1894 aa2.76□□□□□ -1.97
SGIP1-209ENST00000480548 NPC2P61916 151 aa2.76□□□□□ -1.97
SGIP1-209ENST00000480548 PKIAP61925 76 aa2.76□□□□□ -1.97
SGIP1-209ENST00000480548 C12orf73Q69YU5 71 aa2.76□□□□□ -1.97
SGIP1-209ENST00000480548 LINC00299Q6ZSB3 139 aa2.76□□□□□ -1.97
SGIP1-209ENST00000480548 C15orf53Q8NAA6 179 aa2.76□□□□□ -1.97
SGIP1-209ENST00000480548 C10orf105Q8TEF2 133 aa2.76□□□□□ -1.97
SGIP1-209ENST00000480548 TMEM106BQ9NUM4 274 aa2.76□□□□□ -1.97
SGIP1-209ENST00000480548 CUL7Q14999 1698 aa2.76□□□□□ -1.97
SGIP1-209ENST00000480548 A0A0J9YY99 117 aa2.75□□□□□ -1.97
SGIP1-209ENST00000480548 A6NIN4 97 aa2.75□□□□□ -1.97
SGIP1-209ENST00000480548 PPYP01298 95 aa2.75□□□□□ -1.97
SGIP1-209ENST00000480548 KRTAP10-8P60410 259 aa2.75□□□□□ -1.97
SGIP1-209ENST00000480548 MPV17LQ2QL34 196 aa2.75□□□□□ -1.97
SGIP1-209ENST00000480548 S100A7L2Q5SY68 101 aa2.75□□□□□ -1.97
SGIP1-209ENST00000480548 RPL7L1Q6DKI1 246 aaKnown RBP2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms