RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 HLA-DRB4X5D2U9 266 aa15.9■□□□□ 0.14
COL13A1-208ENST00000479733 SYT8Q8NBV8 401 aa15.9■□□□□ 0.14
COL13A1-208ENST00000479733 RAXQ9Y2V3 346 aa15.9■□□□□ 0.14
COL13A1-208ENST00000479733 M0R381 172 aa15.89■□□□□ 0.13
COL13A1-208ENST00000479733 BUB3O43684 328 aa15.89■□□□□ 0.13
COL13A1-208ENST00000479733 SCGB1D4Q6XE38 83 aa15.89■□□□□ 0.13
COL13A1-208ENST00000479733 LINC01549A6NIU2 74 aa15.89■□□□□ 0.13
COL13A1-208ENST00000479733 PSMB2P49721 201 aa15.89■□□□□ 0.13
COL13A1-208ENST00000479733 PTH2Q96A98 100 aa15.89■□□□□ 0.13
COL13A1-208ENST00000479733 TLN1Q9Y490 2541 aaKnown RBP15.89■□□□□ 0.13
COL13A1-208ENST00000479733 SCGB2A1O75556 95 aa15.88■□□□□ 0.13
COL13A1-208ENST00000479733 LGALS1P09382 135 aaKnown RBP15.88■□□□□ 0.13
COL13A1-208ENST00000479733 ZFP2Q6ZN57 461 aa15.88■□□□□ 0.13
COL13A1-208ENST00000479733 HIF1ANQ9NWT6 349 aa15.88■□□□□ 0.13
COL13A1-208ENST00000479733 IGF1P05019 195 aa15.88■□□□□ 0.13
COL13A1-208ENST00000479733 SRSF9Q13242 221 aaKnown RBP eCLIP15.88■□□□□ 0.13
COL13A1-208ENST00000479733 CLEC19AQ6UXS0 136 aa15.88■□□□□ 0.13
COL13A1-208ENST00000479733 OR11H6Q8NGC7 330 aa15.88■□□□□ 0.13
COL13A1-208ENST00000479733 PRR30Q53SZ7 412 aaPredicted RBP15.87■□□□□ 0.13
COL13A1-208ENST00000479733 KLHL30-AS1Q8NEE0 82 aa15.87■□□□□ 0.13
COL13A1-208ENST00000479733 GLMPQ8WWB7 406 aa15.87■□□□□ 0.13
COL13A1-208ENST00000479733 RPL39LQ96EH5 51 aaKnown RBP15.87■□□□□ 0.13
COL13A1-208ENST00000479733 PRADC1Q9BSG0 188 aa15.87■□□□□ 0.13
COL13A1-208ENST00000479733 SMIM2Q9BVW6 85 aa15.87■□□□□ 0.13
COL13A1-208ENST00000479733 ZNF815PA8K554 130 aa15.87■□□□□ 0.13
COL13A1-208ENST00000479733 TGFAP01135 160 aa15.87■□□□□ 0.13
COL13A1-208ENST00000479733 EMP1P54849 157 aa15.86■□□□□ 0.13
COL13A1-208ENST00000479733 FOXI1Q12951 378 aa15.86■□□□□ 0.13
COL13A1-208ENST00000479733 PLEKHB2Q96CS7 222 aa15.86■□□□□ 0.13
COL13A1-208ENST00000479733 ZFHX2Q9C0A1 2572 aaPredicted RBP15.86■□□□□ 0.13
COL13A1-208ENST00000479733 IGHV7-81A0A0B4J1V7 117 aa15.86■□□□□ 0.13
COL13A1-208ENST00000479733 SMCPP49901 116 aaPredicted RBP15.86■□□□□ 0.13
COL13A1-208ENST00000479733 NFE4Q86UQ8 179 aa15.86■□□□□ 0.13
COL13A1-208ENST00000479733 TRAV26-1A0A087WT03 109 aa15.85■□□□□ 0.13
COL13A1-208ENST00000479733 MSRB2Q9Y3D2 182 aa15.85■□□□□ 0.13
COL13A1-208ENST00000479733 LINC01548A6NM66 108 aa15.85■□□□□ 0.13
COL13A1-208ENST00000479733 ZNF292O60281 2723 aa15.85■□□□□ 0.13
COL13A1-208ENST00000479733 TRAV8-2A0A0B4J237 113 aa15.84■□□□□ 0.13
COL13A1-208ENST00000479733 SLC25A16P16260 332 aa15.84■□□□□ 0.13
COL13A1-208ENST00000479733 C14orf178Q8N769 122 aaPredicted RBP15.84■□□□□ 0.13
COL13A1-208ENST00000479733 LY6G5BQ8NDX9 201 aa15.84■□□□□ 0.13
COL13A1-208ENST00000479733 PRR9Q5T870 116 aa15.84■□□□□ 0.13
COL13A1-208ENST00000479733 ZFAND3Q9H8U3 227 aa15.84■□□□□ 0.13
COL13A1-208ENST00000479733 MGPP08493 103 aa15.84■□□□□ 0.13
COL13A1-208ENST00000479733 DEFB1P60022 68 aa15.83■□□□□ 0.12
COL13A1-208ENST00000479733 VMO1Q7Z5L0 202 aa15.83■□□□□ 0.12
COL13A1-208ENST00000479733 AKAP6Q13023 2319 aa15.83■□□□□ 0.12
COL13A1-208ENST00000479733 GRNP28799 593 aaKnown RBP15.83■□□□□ 0.12
COL13A1-208ENST00000479733 C8orf86Q6ZUL3 223 aa15.83■□□□□ 0.12
COL13A1-208ENST00000479733 DLX4Q92988 240 aaPredicted RBP15.83■□□□□ 0.12
COL13A1-208ENST00000479733 PRSS29PA6NIE9 313 aa15.82■□□□□ 0.12
COL13A1-208ENST00000479733 SPINK8P0C7L1 97 aa15.82■□□□□ 0.12
COL13A1-208ENST00000479733 SUMO2P61956 95 aaKnown RBP15.82■□□□□ 0.12
COL13A1-208ENST00000479733 CFAP126Q5VTH2 177 aa15.82■□□□□ 0.12
COL13A1-208ENST00000479733 NEXN-AS1Q8NBZ9 246 aa15.82■□□□□ 0.12
COL13A1-208ENST00000479733 SLC50A1Q9BRV3 221 aa15.82■□□□□ 0.12
COL13A1-208ENST00000479733 C1QTNF4Q9BXJ3 329 aa15.82■□□□□ 0.12
COL13A1-208ENST00000479733 GEMIN7Q9H840 131 aaKnown RBP15.82■□□□□ 0.12
COL13A1-208ENST00000479733 CLPSL1A2RUU4 121 aa15.82■□□□□ 0.12
COL13A1-208ENST00000479733 RBAKDNA6NC62 111 aa15.82■□□□□ 0.12
COL13A1-208ENST00000479733 G3V318 75 aa15.82■□□□□ 0.12
COL13A1-208ENST00000479733 MT-ATP8P03928 68 aa15.82■□□□□ 0.12
COL13A1-208ENST00000479733 C2orf66Q6UXQ4 117 aa15.82■□□□□ 0.12
COL13A1-208ENST00000479733 TRAV12-1A0A0B4J245 112 aa15.81■□□□□ 0.12
COL13A1-208ENST00000479733 RASL10AQ92737 203 aa15.81■□□□□ 0.12
COL13A1-208ENST00000479733 S100A4P26447 101 aaKnown RBP15.81■□□□□ 0.12
COL13A1-208ENST00000479733 BAALCQ8WXS3 180 aa15.81■□□□□ 0.12
COL13A1-208ENST00000479733 CDIP1Q9H305 208 aa15.81■□□□□ 0.12
COL13A1-208ENST00000479733 FHL3Q13643 280 aa15.81■□□□□ 0.12
COL13A1-208ENST00000479733 MRAP2Q96G30 205 aa15.81■□□□□ 0.12
COL13A1-208ENST00000479733 ODF3BA8MYP8 253 aa15.8■□□□□ 0.12
COL13A1-208ENST00000479733 TSPAN13O95857 204 aa15.8■□□□□ 0.12
COL13A1-208ENST00000479733 PRTN3P24158 256 aa15.8■□□□□ 0.12
COL13A1-208ENST00000479733 ORMDL2Q53FV1 153 aa15.8■□□□□ 0.12
COL13A1-208ENST00000479733 TOMM6Q96B49 74 aa15.8■□□□□ 0.12
COL13A1-208ENST00000479733 FAM90A27PA6NNH2 459 aa15.79■□□□□ 0.12
COL13A1-208ENST00000479733 CRYBA4P53673 196 aa15.79■□□□□ 0.12
COL13A1-208ENST00000479733 C16orf92Q96LL3 132 aa15.79■□□□□ 0.12
COL13A1-208ENST00000479733 ATP6V0E1O15342 81 aa15.78■□□□□ 0.12
COL13A1-208ENST00000479733 Q8N9W7 124 aa15.78■□□□□ 0.12
COL13A1-208ENST00000479733 Q8NA96 180 aa15.78■□□□□ 0.12
COL13A1-208ENST00000479733 CCDC140Q96MF4 163 aa15.78■□□□□ 0.12
COL13A1-208ENST00000479733 TCTEX1D4Q5JR98 221 aa15.78■□□□□ 0.12
COL13A1-208ENST00000479733 ZFHX3Q15911 3703 aa15.77■□□□□ 0.12
COL13A1-208ENST00000479733 PTPRZ1P23471 2315 aaPredicted RBP15.77■□□□□ 0.12
COL13A1-208ENST00000479733 CEP295Q9C0D2 2601 aa15.77■□□□□ 0.12
COL13A1-208ENST00000479733 TMEM238LA0A1B0GVL6 79 aa15.77■□□□□ 0.12
COL13A1-208ENST00000479733 A6NJY4 79 aa15.77■□□□□ 0.12
COL13A1-208ENST00000479733 XGP55808 180 aa15.77■□□□□ 0.11
COL13A1-208ENST00000479733 METTL26Q96S19 204 aa15.77■□□□□ 0.11
COL13A1-208ENST00000479733 PHLDA3Q9Y5J5 127 aa15.77■□□□□ 0.11
COL13A1-208ENST00000479733 Q8N6K4 173 aa15.76■□□□□ 0.11
COL13A1-208ENST00000479733 DUSP14O95147 198 aaKnown RBP15.76■□□□□ 0.11
COL13A1-208ENST00000479733 TIMD4Q96H15 378 aa15.76■□□□□ 0.11
COL13A1-208ENST00000479733 IGKV3-7A0A075B6H7 116 aa15.75■□□□□ 0.11
COL13A1-208ENST00000479733 IGHV4-4A0A075B6R2 117 aa15.75■□□□□ 0.11
COL13A1-208ENST00000479733 C20orf173Q96LM9 149 aa15.75■□□□□ 0.11
COL13A1-208ENST00000479733 LINC00527Q9UJ94 153 aa15.75■□□□□ 0.11
COL13A1-208ENST00000479733 C9orf47Q6ZRZ4 202 aa15.74■□□□□ 0.11
COL13A1-208ENST00000479733 MUC6Q6W4X9 2439 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms