RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 IBA57Q5T440 356 aaKnown RBP9.46□□□□□ -0.9
CHD3-210ENST00000479080 MRAPQ8TCY5 172 aa9.46□□□□□ -0.9
CHD3-210ENST00000479080 RNF183Q96D59 192 aa9.46□□□□□ -0.9
CHD3-210ENST00000479080 OVOL2Q9BRP0 275 aa9.46□□□□□ -0.9
CHD3-210ENST00000479080 C1QTNF4Q9BXJ3 329 aa9.46□□□□□ -0.9
CHD3-210ENST00000479080 RPP21Q9H633 154 aaKnown RBP9.46□□□□□ -0.9
CHD3-210ENST00000479080 NAGKQ9UJ70 344 aa9.46□□□□□ -0.9
CHD3-210ENST00000479080 IGHV3OR16-12A0A075B7B8 117 aa9.45□□□□□ -0.9
CHD3-210ENST00000479080 GRIFINA4D1Z8 144 aa9.45□□□□□ -0.9
CHD3-210ENST00000479080 ZNF705GA8MUZ8 300 aaPredicted RBP9.45□□□□□ -0.9
CHD3-210ENST00000479080 H7BYZ3 331 aa9.45□□□□□ -0.9
CHD3-210ENST00000479080 UBE2CO00762 179 aa9.45□□□□□ -0.9
CHD3-210ENST00000479080 SPRY2O43597 315 aa9.45□□□□□ -0.9
CHD3-210ENST00000479080 Q6ZWC4 215 aa9.45□□□□□ -0.9
CHD3-210ENST00000479080 C11orf72Q8NBR9 251 aa9.45□□□□□ -0.9
CHD3-210ENST00000479080 OR2D3Q8NGH3 330 aa9.45□□□□□ -0.9
CHD3-210ENST00000479080 OR10G8Q8NGN5 311 aa9.45□□□□□ -0.9
CHD3-210ENST00000479080 IGHV3-16A0A0C4DH30 117 aa9.44□□□□□ -0.9
CHD3-210ENST00000479080 C7orf77A4D0Y5 90 aa9.44□□□□□ -0.9
CHD3-210ENST00000479080 GATCO43716 136 aaKnown RBP9.44□□□□□ -0.9
CHD3-210ENST00000479080 P01737 135 aa9.44□□□□□ -0.9
CHD3-210ENST00000479080 ORM1P02763 201 aa9.44□□□□□ -0.9
CHD3-210ENST00000479080 RNASE3P12724 160 aaKnown RBP9.44□□□□□ -0.9
CHD3-210ENST00000479080 ERVFC1-1P60608 527 aa9.44□□□□□ -0.9
CHD3-210ENST00000479080 DEFB121Q5J5C9 76 aa9.44□□□□□ -0.9
CHD3-210ENST00000479080 IL17DQ8TAD2 202 aa9.44□□□□□ -0.9
CHD3-210ENST00000479080 GTSF1Q8WW33 167 aa9.44□□□□□ -0.9
CHD3-210ENST00000479080 LINC01587Q99440 93 aa9.44□□□□□ -0.9
CHD3-210ENST00000479080 TM2D3Q9BRN9 247 aa9.44□□□□□ -0.9
CHD3-210ENST00000479080 PYGO2Q9BRQ0 406 aa9.44□□□□□ -0.9
CHD3-210ENST00000479080 BIN3Q9NQY0 253 aa9.44□□□□□ -0.9
CHD3-210ENST00000479080 MDFICQ9P1T7 246 aa9.44□□□□□ -0.9
CHD3-210ENST00000479080 GOLT1BQ9Y3E0 138 aa9.44□□□□□ -0.9
CHD3-210ENST00000479080 TMEM189A5PLL7 270 aa9.43□□□□□ -0.9
CHD3-210ENST00000479080 B4DEV8 164 aa9.43□□□□□ -0.9
CHD3-210ENST00000479080 IGLC6P0CF74 106 aa9.43□□□□□ -0.9
CHD3-210ENST00000479080 DNLZQ5SXM8 178 aa9.43□□□□□ -0.9
CHD3-210ENST00000479080 TMEM256Q8N2U0 113 aa9.43□□□□□ -0.9
CHD3-210ENST00000479080 RNASE8Q8TDE3 154 aaKnown RBP9.43□□□□□ -0.9
CHD3-210ENST00000479080 RCHY1Q96PM5 261 aa9.43□□□□□ -0.9
CHD3-210ENST00000479080 CXCL1P09341 107 aa9.42□□□□□ -0.9
CHD3-210ENST00000479080 CT83Q5H943 113 aa9.42□□□□□ -0.9
CHD3-210ENST00000479080 FAM159AQ6UWV7 190 aa9.42□□□□□ -0.9
CHD3-210ENST00000479080 SVBPQ8N300 66 aa9.42□□□□□ -0.9
CHD3-210ENST00000479080 Q8NAQ8 132 aa9.42□□□□□ -0.9
CHD3-210ENST00000479080 DAZAP1Q96EP5 407 aaKnown RBP9.42□□□□□ -0.9
CHD3-210ENST00000479080 NEU1Q99519 415 aa9.42□□□□□ -0.9
CHD3-210ENST00000479080 TENM3Q9P273 2699 aa9.41□□□□□ -0.9
CHD3-210ENST00000479080 TCL1AP56279 114 aa9.41□□□□□ -0.9
CHD3-210ENST00000479080 RHEBQ15382 184 aa9.41□□□□□ -0.9
CHD3-210ENST00000479080 OR11H2Q8NH07 326 aa9.41□□□□□ -0.9
CHD3-210ENST00000479080 C9orf85Q96MD7 179 aa9.41□□□□□ -0.9
CHD3-210ENST00000479080 B9D2Q9BPU9 175 aa9.41□□□□□ -0.9
CHD3-210ENST00000479080 TMEM208Q9BTX3 173 aa9.41□□□□□ -0.9
CHD3-210ENST00000479080 SCRT2Q9NQ03 307 aa9.41□□□□□ -0.9
CHD3-210ENST00000479080 TP53TG1Q9Y2A0 90 aa9.41□□□□□ -0.9
CHD3-210ENST00000479080 NBEAL2Q6ZNJ1 2754 aa9.4□□□□□ -0.9
CHD3-210ENST00000479080 A0A087WWC5 75 aa9.4□□□□□ -0.9
CHD3-210ENST00000479080 IGHV4-28A0A0C4DH34 117 aa9.4□□□□□ -0.9
CHD3-210ENST00000479080 SMIM27A0A1W2PRY6 76 aa9.4□□□□□ -0.9
CHD3-210ENST00000479080 CBY3A6NI87 242 aa9.4□□□□□ -0.9
CHD3-210ENST00000479080 H3BVH4 76 aa9.4□□□□□ -0.9
CHD3-210ENST00000479080 SNAI2O43623 268 aa9.4□□□□□ -0.9
CHD3-210ENST00000479080 SNAPINO95295 136 aa9.4□□□□□ -0.9
CHD3-210ENST00000479080 HTN1P15515 57 aa9.4□□□□□ -0.9
CHD3-210ENST00000479080 C15orf54Q8N8G6 183 aa9.4□□□□□ -0.9
CHD3-210ENST00000479080 TSKUQ8WUA8 353 aa9.4□□□□□ -0.9
CHD3-210ENST00000479080 KCNS1Q96KK3 526 aa9.4□□□□□ -0.9
CHD3-210ENST00000479080 SSBP4Q9BWG4 385 aaPredicted RBP9.4□□□□□ -0.9
CHD3-210ENST00000479080 RPS10P5Q9NQ39 176 aa9.4□□□□□ -0.9
CHD3-210ENST00000479080 GSN-AS1Q9NRJ2 163 aa9.4□□□□□ -0.9
CHD3-210ENST00000479080 IL36BQ9NZH7 164 aa9.4□□□□□ -0.9
CHD3-210ENST00000479080 TRGV11A0A075B6L2 103 aa9.39□□□□□ -0.91
CHD3-210ENST00000479080 DEFB4AO15263 64 aa9.39□□□□□ -0.91
CHD3-210ENST00000479080 SCO1O75880 301 aa9.39□□□□□ -0.91
CHD3-210ENST00000479080 MT-ND4LP03901 98 aa9.39□□□□□ -0.91
CHD3-210ENST00000479080 ARMS2P0C7Q2 107 aa9.39□□□□□ -0.91
CHD3-210ENST00000479080 CTRLP40313 264 aa9.39□□□□□ -0.91
CHD3-210ENST00000479080 ASIPP42127 132 aa9.39□□□□□ -0.91
CHD3-210ENST00000479080 RRN3P1Q2M238 152 aa9.39□□□□□ -0.91
CHD3-210ENST00000479080 TMEM263Q8WUH6 116 aaKnown RBP9.39□□□□□ -0.91
CHD3-210ENST00000479080 ANAPC16Q96DE5 110 aa9.39□□□□□ -0.91
CHD3-210ENST00000479080 YPEL4Q96NS1 127 aa9.39□□□□□ -0.91
CHD3-210ENST00000479080 MUC21A0A0G2JKD1 596 aa9.38□□□□□ -0.91
CHD3-210ENST00000479080 MUC21A0A140T8X8 626 aa9.38□□□□□ -0.91
CHD3-210ENST00000479080 PPP1R2P9O14990 202 aa9.38□□□□□ -0.91
CHD3-210ENST00000479080 MED14OSP0DP75 135 aa9.38□□□□□ -0.91
CHD3-210ENST00000479080 FOXA3P55318 350 aaPredicted RBP9.38□□□□□ -0.91
CHD3-210ENST00000479080 RPS20P60866 119 aaKnown RBP9.38□□□□□ -0.91
CHD3-210ENST00000479080 NUP35Q8NFH5 326 aa9.38□□□□□ -0.91
CHD3-210ENST00000479080 OR10AG1Q8NH19 301 aa9.38□□□□□ -0.91
CHD3-210ENST00000479080 SPATA25Q9BR10 227 aa9.38□□□□□ -0.91
CHD3-210ENST00000479080 CTDSP1Q9GZU7 261 aa9.38□□□□□ -0.91
CHD3-210ENST00000479080 SMIM9A6NGZ8 99 aa9.37□□□□□ -0.91
CHD3-210ENST00000479080 A8MWL6 223 aa9.37□□□□□ -0.91
CHD3-210ENST00000479080 NXPH4O95158 308 aa9.37□□□□□ -0.91
CHD3-210ENST00000479080 S100A1P23297 94 aa9.37□□□□□ -0.91
CHD3-210ENST00000479080 FAM3BP58499 235 aaPredicted RBP9.37□□□□□ -0.91
CHD3-210ENST00000479080 ZNF415Q09FC8 603 aa9.37□□□□□ -0.91
CHD3-210ENST00000479080 LYZL1Q6UWQ5 148 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms