RNA–Protein interactions for RNA: ENST00000478932.1

USP25-208, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best)

Gene USP25, Length 2,605 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-208ENST00000478932 LOC102724200A0A096LPH7 203 aaPredicted RBP3.1□□□□□ -1.91
USP25-208ENST00000478932 FBLL1A6NHQ2 334 aaKnown RBP3.1□□□□□ -1.91
USP25-208ENST00000478932 A6NJY4 79 aa3.1□□□□□ -1.91
USP25-208ENST00000478932 K7EMT4 169 aa3.1□□□□□ -1.91
USP25-208ENST00000478932 SCGB1D1O95968 90 aa3.1□□□□□ -1.91
USP25-208ENST00000478932 RNASE4P34096 147 aaKnown RBP3.1□□□□□ -1.91
USP25-208ENST00000478932 SRSF2Q01130 221 aaKnown RBP3.1□□□□□ -1.91
USP25-208ENST00000478932 JOSD1Q15040 202 aaPredicted RBP3.1□□□□□ -1.91
USP25-208ENST00000478932 TDRG1Q3Y452 100 aa3.1□□□□□ -1.91
USP25-208ENST00000478932 OR10J3Q5JRS4 329 aa3.1□□□□□ -1.91
USP25-208ENST00000478932 ADAMTSL5Q6ZMM2 481 aa3.1□□□□□ -1.91
USP25-208ENST00000478932 AMN1Q8IY45 258 aa3.1□□□□□ -1.91
USP25-208ENST00000478932 Q8N2B8 174 aa3.1□□□□□ -1.91
USP25-208ENST00000478932 FER1L6-AS1Q8NA97 138 aa3.1□□□□□ -1.91
USP25-208ENST00000478932 OR8A1Q8NGG7 326 aa3.1□□□□□ -1.91
USP25-208ENST00000478932 OR10J6PQ8NGY7 276 aa3.1□□□□□ -1.91
USP25-208ENST00000478932 SVIPQ8NHG7 77 aa3.1□□□□□ -1.91
USP25-208ENST00000478932 MYOZ3Q8TDC0 251 aa3.1□□□□□ -1.91
USP25-208ENST00000478932 MS4A6AQ9H2W1 248 aa3.1□□□□□ -1.91
USP25-208ENST00000478932 NAGKQ9UJ70 344 aa3.1□□□□□ -1.91
USP25-208ENST00000478932 UFC1Q9Y3C8 167 aa3.1□□□□□ -1.91
USP25-208ENST00000478932 RNF114Q9Y508 228 aa3.1□□□□□ -1.91
USP25-208ENST00000478932 MUC4Q99102 2169 aa3.1□□□□□ -1.91
USP25-208ENST00000478932 MGAM2Q2M2H8 2515 aa3.1□□□□□ -1.91
USP25-208ENST00000478932 TMEM89A2RUT3 159 aa3.1□□□□□ -1.91
USP25-208ENST00000478932 C2orf70A6NJV1 201 aa3.1□□□□□ -1.91
USP25-208ENST00000478932 HSBP1O75506 76 aa3.1□□□□□ -1.91
USP25-208ENST00000478932 FOSL1P15407 271 aa3.1□□□□□ -1.91
USP25-208ENST00000478932 EVI2AP22794 236 aa3.1□□□□□ -1.91
USP25-208ENST00000478932 RIGQ13278 110 aa3.1□□□□□ -1.91
USP25-208ENST00000478932 KLF5Q13887 457 aaPredicted RBP3.1□□□□□ -1.91
USP25-208ENST00000478932 PSMG4Q5JS54 123 aa3.1□□□□□ -1.91
USP25-208ENST00000478932 RNASEKQ6P5S7 137 aaKnown RBP3.1□□□□□ -1.91
USP25-208ENST00000478932 NIT1Q86X76 327 aa3.1□□□□□ -1.91
USP25-208ENST00000478932 ZFAND2AQ8N6M9 145 aa3.1□□□□□ -1.91
USP25-208ENST00000478932 RNF152Q8N8N0 203 aa3.1□□□□□ -1.91
USP25-208ENST00000478932 OR10AG1Q8NH19 301 aa3.1□□□□□ -1.91
USP25-208ENST00000478932 URB1-AS1Q96HZ7 61 aa3.1□□□□□ -1.91
USP25-208ENST00000478932 LINC00477Q96M19 166 aa3.1□□□□□ -1.91
USP25-208ENST00000478932 PRO1933Q9H354 126 aa3.1□□□□□ -1.91
USP25-208ENST00000478932 TIMM8BQ9Y5J9 83 aaPredicted RBP3.1□□□□□ -1.91
USP25-208ENST00000478932 LINC00587B1AMM8 73 aa3.09□□□□□ -1.91
USP25-208ENST00000478932 CD5LO43866 347 aa3.09□□□□□ -1.91
USP25-208ENST00000478932 ZNF324O75467 553 aaPredicted RBP3.09□□□□□ -1.91
USP25-208ENST00000478932 GAS8-AS1O95177 125 aa3.09□□□□□ -1.91
USP25-208ENST00000478932 IGLC6P0CF74 106 aa3.09□□□□□ -1.91
USP25-208ENST00000478932 ESDP10768 282 aa3.09□□□□□ -1.91
USP25-208ENST00000478932 KRTDAPP60985 99 aa3.09□□□□□ -1.91
USP25-208ENST00000478932 Q6AWC8 147 aa3.09□□□□□ -1.91
USP25-208ENST00000478932 KLHL30-AS1Q8NEE0 82 aa3.09□□□□□ -1.91
USP25-208ENST00000478932 DPF1Q92782 380 aa3.09□□□□□ -1.91
USP25-208ENST00000478932 DLX4Q92988 240 aaPredicted RBP3.09□□□□□ -1.91
USP25-208ENST00000478932 BORCS7Q96B45 105 aa3.09□□□□□ -1.91
USP25-208ENST00000478932 MRPL53Q96EL3 112 aaKnown RBP3.09□□□□□ -1.91
USP25-208ENST00000478932 TRAV12-2A0A075B6T6 113 aa3.09□□□□□ -1.91
USP25-208ENST00000478932 LOC389332A0A1B0GUA5 103 aa3.09□□□□□ -1.91
USP25-208ENST00000478932 D6R8Y8 96 aa3.09□□□□□ -1.91
USP25-208ENST00000478932 SMKR1H3BMG3 65 aa3.09□□□□□ -1.91
USP25-208ENST00000478932 M0R2Z0 102 aa3.09□□□□□ -1.91
USP25-208ENST00000478932 OVOL1O14753 267 aa3.09□□□□□ -1.91
USP25-208ENST00000478932 GNRH2O43555 120 aa3.09□□□□□ -1.91
USP25-208ENST00000478932 LINC00614P0C842 121 aa3.09□□□□□ -1.91
USP25-208ENST00000478932 PAFAH1B2P68402 229 aa3.09□□□□□ -1.91
USP25-208ENST00000478932 ZNF664Q8N3J9 261 aa3.09□□□□□ -1.91
USP25-208ENST00000478932 OR1N2Q8NGR9 330 aa3.09□□□□□ -1.91
USP25-208ENST00000478932 LINC01006Q8NI28 216 aa3.09□□□□□ -1.91
USP25-208ENST00000478932 TRAV12-3A0A0B4J271 114 aa3.08□□□□□ -1.92
USP25-208ENST00000478932 H3BVH4 76 aa3.08□□□□□ -1.92
USP25-208ENST00000478932 LGALS9O00182 355 aa3.08□□□□□ -1.92
USP25-208ENST00000478932 LY6G6DO95868 133 aa3.08□□□□□ -1.92
USP25-208ENST00000478932 NCR2O95944 276 aa3.08□□□□□ -1.92
USP25-208ENST00000478932 CD28P10747 220 aa3.08□□□□□ -1.92
USP25-208ENST00000478932 CTRLP40313 264 aa3.08□□□□□ -1.92
USP25-208ENST00000478932 ID1P41134 155 aa3.08□□□□□ -1.92
USP25-208ENST00000478932 FXYD7P58549 80 aa3.08□□□□□ -1.92
USP25-208ENST00000478932 SNRPD3P62318 126 aaKnown RBP3.08□□□□□ -1.92
USP25-208ENST00000478932 ZNF124Q15973 351 aa3.08□□□□□ -1.92
USP25-208ENST00000478932 FAM104BQ5XKR9 115 aa3.08□□□□□ -1.92
USP25-208ENST00000478932 TMEM61Q8N0U2 210 aa3.08□□□□□ -1.92
USP25-208ENST00000478932 OR9G4Q8NGQ1 327 aa3.08□□□□□ -1.92
USP25-208ENST00000478932 KCNS1Q96KK3 526 aa3.08□□□□□ -1.92
USP25-208ENST00000478932 CITED2Q99967 270 aaPredicted RBP3.08□□□□□ -1.92
USP25-208ENST00000478932 PPP1R14DQ9NXH3 145 aa3.08□□□□□ -1.92
USP25-208ENST00000478932 LINC01619G3V211 115 aa3.08□□□□□ -1.92
USP25-208ENST00000478932 K7EQG2 157 aa3.08□□□□□ -1.92
USP25-208ENST00000478932 M0R381 172 aa3.08□□□□□ -1.92
USP25-208ENST00000478932 HTN1P15515 57 aa3.08□□□□□ -1.92
USP25-208ENST00000478932 GATA1P15976 413 aaPredicted RBP3.08□□□□□ -1.92
USP25-208ENST00000478932 S100A4P26447 101 aaKnown RBP3.08□□□□□ -1.92
USP25-208ENST00000478932 CKS2P33552 79 aa3.08□□□□□ -1.92
USP25-208ENST00000478932 IFI27P40305 119 aaPredicted RBP3.08□□□□□ -1.92
USP25-208ENST00000478932 RPS20P60866 119 aaKnown RBP3.08□□□□□ -1.92
USP25-208ENST00000478932 ANXA2RQ3ZCQ2 193 aa3.08□□□□□ -1.92
USP25-208ENST00000478932 MRPL51Q4U2R6 128 aaKnown RBP3.08□□□□□ -1.92
USP25-208ENST00000478932 SPANXN1Q5VSR9 72 aa3.08□□□□□ -1.92
USP25-208ENST00000478932 ZNF493Q6ZR52 646 aa3.08□□□□□ -1.92
USP25-208ENST00000478932 LINC00173Q6ZV60 143 aa3.08□□□□□ -1.92
USP25-208ENST00000478932 TMEM86BQ8N661 226 aa3.08□□□□□ -1.92
USP25-208ENST00000478932 PRSS3P2Q8NHM4 247 aa3.08□□□□□ -1.92
USP25-208ENST00000478932 C4orf3Q8WVX3 66 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms