RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 ZNF670-ZNF695F2Z2N8 137 aa-0.4□□□□□ -2.47
HPS3-205ENST00000478525 APOC4-APOC2K7ER74 178 aa-0.4□□□□□ -2.47
HPS3-205ENST00000478525 BCL2P10415 239 aa-0.4□□□□□ -2.47
HPS3-205ENST00000478525 COX4I1P13073 169 aa-0.4□□□□□ -2.47
HPS3-205ENST00000478525 NCALDP61601 193 aa-0.4□□□□□ -2.47
HPS3-205ENST00000478525 COTL1Q14019 142 aa-0.4□□□□□ -2.47
HPS3-205ENST00000478525 TAF1AQ15573 450 aaPredicted RBP-0.4□□□□□ -2.47
HPS3-205ENST00000478525 PTRHD1Q6GMV3 140 aaKnown RBP-0.4□□□□□ -2.47
HPS3-205ENST00000478525 LYPD5Q6UWN5 251 aa-0.4□□□□□ -2.47
HPS3-205ENST00000478525 NDUFA11Q86Y39 141 aa-0.4□□□□□ -2.47
HPS3-205ENST00000478525 UBE2DNLQ8IWF7 75 aa-0.4□□□□□ -2.47
HPS3-205ENST00000478525 Q8IZM0 81 aa-0.4□□□□□ -2.47
HPS3-205ENST00000478525 PPDPFLQ8WWR9 84 aa-0.4□□□□□ -2.47
HPS3-205ENST00000478525 CFAP53Q96M91 514 aa-0.4□□□□□ -2.47
HPS3-205ENST00000478525 SH3BGRL3Q9H299 93 aa-0.4□□□□□ -2.47
HPS3-205ENST00000478525 UCK1Q9HA47 277 aa-0.4□□□□□ -2.47
HPS3-205ENST00000478525 LYRM2Q9NU23 88 aaPredicted RBP-0.4□□□□□ -2.47
HPS3-205ENST00000478525 SSR3Q9UNL2 185 aa-0.4□□□□□ -2.47
HPS3-205ENST00000478525 SETXQ7Z333 2677 aaKnown RBP-0.4□□□□□ -2.47
HPS3-205ENST00000478525 FRMPD1Q5SYB0 1578 aa-0.4□□□□□ -2.47
HPS3-205ENST00000478525 SPTA1P02549 2419 aa-0.4□□□□□ -2.47
HPS3-205ENST00000478525 CREBBPQ92793 2442 aa-0.4□□□□□ -2.47
HPS3-205ENST00000478525 KIF13AQ9H1H9 1805 aa-0.41□□□□□ -2.47
HPS3-205ENST00000478525 KMT2CQ8NEZ4 4911 aaKnown RBP-0.41□□□□□ -2.47
HPS3-205ENST00000478525 FAT2Q9NYQ8 4349 aa-0.41□□□□□ -2.48
HPS3-205ENST00000478525 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.41□□□□□ -2.48
HPS3-205ENST00000478525 PNMA8CA0A1B0GUJ8 204 aa-0.41□□□□□ -2.48
HPS3-205ENST00000478525 OR2H2O95918 312 aa-0.41□□□□□ -2.48
HPS3-205ENST00000478525 POLR2JP52435 117 aaKnown RBP-0.41□□□□□ -2.48
HPS3-205ENST00000478525 GTF2A1P52655 376 aaPredicted RBP-0.41□□□□□ -2.48
HPS3-205ENST00000478525 CCL7P80098 99 aa-0.41□□□□□ -2.48
HPS3-205ENST00000478525 RTL8BQ17RB0 113 aa-0.41□□□□□ -2.48
HPS3-205ENST00000478525 SLC48A1Q6P1K1 146 aa-0.41□□□□□ -2.48
HPS3-205ENST00000478525 CSAG1Q6PB30 78 aa-0.41□□□□□ -2.48
HPS3-205ENST00000478525 OR8J2Q8NGG1 315 aa-0.41□□□□□ -2.48
HPS3-205ENST00000478525 BRK1Q8WUW1 75 aa-0.41□□□□□ -2.48
HPS3-205ENST00000478525 BATF3Q9NR55 127 aa-0.41□□□□□ -2.48
HPS3-205ENST00000478525 SLC22A13Q9Y226 551 aa-0.41□□□□□ -2.48
HPS3-205ENST00000478525 TRAPPC8Q9Y2L5 1435 aa-0.41□□□□□ -2.48
HPS3-205ENST00000478525 PLXNB2O15031 1838 aa-0.41□□□□□ -2.48
HPS3-205ENST00000478525 FAT1Q14517 4588 aa-0.41□□□□□ -2.48
HPS3-205ENST00000478525 MAP1AP78559 2803 aaPredicted RBP-0.42□□□□□ -2.48
HPS3-205ENST00000478525 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.42□□□□□ -2.48
HPS3-205ENST00000478525 MYH8P13535 1937 aa-0.42□□□□□ -2.48
HPS3-205ENST00000478525 COL6A3P12111 3177 aa-0.42□□□□□ -2.48
HPS3-205ENST00000478525 HERC1Q15751 4861 aa-0.42□□□□□ -2.48
HPS3-205ENST00000478525 GVQW2A0A096LPI5 108 aaPredicted RBP-0.42□□□□□ -2.48
HPS3-205ENST00000478525 EDF1O60869 148 aaKnown RBP-0.42□□□□□ -2.48
HPS3-205ENST00000478525 CXCL1P09341 107 aa-0.42□□□□□ -2.48
HPS3-205ENST00000478525 GCHFRP30047 84 aa-0.42□□□□□ -2.48
HPS3-205ENST00000478525 DEFA3P59666 94 aa-0.42□□□□□ -2.48
HPS3-205ENST00000478525 MAXP61244 160 aa-0.42□□□□□ -2.48
HPS3-205ENST00000478525 MRPS15P82914 257 aaKnown RBP-0.42□□□□□ -2.48
HPS3-205ENST00000478525 EMX2Q04743 252 aa-0.42□□□□□ -2.48
HPS3-205ENST00000478525 SSBP1Q04837 148 aaKnown RBP-0.42□□□□□ -2.48
HPS3-205ENST00000478525 INSL4Q14641 139 aa-0.42□□□□□ -2.48
HPS3-205ENST00000478525 TMED2Q15363 201 aa-0.42□□□□□ -2.48
HPS3-205ENST00000478525 CNPY4Q8N129 248 aa-0.42□□□□□ -2.48
HPS3-205ENST00000478525 OR5H6Q8NGV6 325 aa-0.42□□□□□ -2.48
HPS3-205ENST00000478525 DIRC1Q969H9 104 aa-0.42□□□□□ -2.48
HPS3-205ENST00000478525 PRELID3AQ96N28 172 aa-0.42□□□□□ -2.48
HPS3-205ENST00000478525 GPX7Q96SL4 187 aaPredicted RBP-0.42□□□□□ -2.48
HPS3-205ENST00000478525 PHB2Q99623 299 aa-0.42□□□□□ -2.48
HPS3-205ENST00000478525 IL20Q9NYY1 176 aa-0.42□□□□□ -2.48
HPS3-205ENST00000478525 PRO0255Q9UI72 69 aa-0.42□□□□□ -2.48
HPS3-205ENST00000478525 LAMTOR2Q9Y2Q5 125 aa-0.42□□□□□ -2.48
HPS3-205ENST00000478525 SPCS1Q9Y6A9 102 aa-0.42□□□□□ -2.48
HPS3-205ENST00000478525 CD109Q6YHK3 1445 aa-0.42□□□□□ -2.48
HPS3-205ENST00000478525 FGD6Q6ZV73 1430 aa-0.42□□□□□ -2.48
HPS3-205ENST00000478525 CHD6Q8TD26 2715 aa-0.42□□□□□ -2.48
HPS3-205ENST00000478525 ZCCHC6Q5VYS8 1495 aaKnown RBP-0.42□□□□□ -2.48
HPS3-205ENST00000478525 SIPA1L3O60292 1781 aaPredicted RBP-0.42□□□□□ -2.48
HPS3-205ENST00000478525 USF3Q68DE3 2245 aa-0.42□□□□□ -2.48
HPS3-205ENST00000478525 CNOT1A5YKK6 2376 aaKnown RBP-0.42□□□□□ -2.48
HPS3-205ENST00000478525 NEBP20929 6669 aa-0.43□□□□□ -2.48
HPS3-205ENST00000478525 TMEM14DPA8MWL7 114 aa-0.43□□□□□ -2.48
HPS3-205ENST00000478525 K7ERJ3 54 aa-0.43□□□□□ -2.48
HPS3-205ENST00000478525 ATG12O94817 140 aa-0.43□□□□□ -2.48
HPS3-205ENST00000478525 C1QBP02746 253 aa-0.43□□□□□ -2.48
HPS3-205ENST00000478525 CST2P09228 141 aa-0.43□□□□□ -2.48
HPS3-205ENST00000478525 SMIM6P0DI80 62 aa-0.43□□□□□ -2.48
HPS3-205ENST00000478525 TAS2R41P59536 307 aa-0.43□□□□□ -2.48
HPS3-205ENST00000478525 SPAG11BQ08648 103 aa-0.43□□□□□ -2.48
HPS3-205ENST00000478525 OR8B8Q15620 311 aa-0.43□□□□□ -2.48
HPS3-205ENST00000478525 MAFIPQ8WZ33 124 aa-0.43□□□□□ -2.48
HPS3-205ENST00000478525 PPP1R14BQ96C90 147 aa-0.43□□□□□ -2.48
HPS3-205ENST00000478525 LXNQ9BS40 222 aa-0.43□□□□□ -2.48
HPS3-205ENST00000478525 C9orf16Q9BUW7 83 aa-0.43□□□□□ -2.48
HPS3-205ENST00000478525 COMMD3Q9UBI1 195 aa-0.43□□□□□ -2.48
HPS3-205ENST00000478525 ERG28Q9UKR5 140 aa-0.43□□□□□ -2.48
HPS3-205ENST00000478525 NUBP2Q9Y5Y2 271 aa-0.43□□□□□ -2.48
HPS3-205ENST00000478525 KDM3BQ7LBC6 1761 aa-0.43□□□□□ -2.48
HPS3-205ENST00000478525 PHIPQ8WWQ0 1821 aa-0.43□□□□□ -2.48
HPS3-205ENST00000478525 FER1L6Q2WGJ9 1857 aa-0.44□□□□□ -2.48
HPS3-205ENST00000478525 CASZ1Q86V15 1759 aa-0.44□□□□□ -2.48
HPS3-205ENST00000478525 CCDC144AA2RUR9 1427 aa-0.44□□□□□ -2.48
HPS3-205ENST00000478525 YTHDC2Q9H6S0 1430 aaKnown RBP-0.44□□□□□ -2.48
HPS3-205ENST00000478525 ADGRL3Q9HAR2 1447 aa-0.44□□□□□ -2.48
HPS3-205ENST00000478525 A0A087WTM6 91 aa-0.44□□□□□ -2.48
HPS3-205ENST00000478525 TRBV7-1A0A0A6YYK4 115 aa-0.44□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms