RNA–Protein interactions for RNA: ENST00000478454.5

CCNL1-220, Transcript of cyclin L1, humanhuman

TSL 4

Gene CCNL1, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-220ENST00000478454 SMDT1Q9H4I9 107 aa1.43□□□□□ -2.18
CCNL1-220ENST00000478454 FKBP11Q9NYL4 201 aa1.43□□□□□ -2.18
CCNL1-220ENST00000478454 METTL1Q9UBP6 276 aaKnown RBP1.43□□□□□ -2.18
CCNL1-220ENST00000478454 NOP16Q9Y3C1 178 aaKnown RBP1.43□□□□□ -2.18
CCNL1-220ENST00000478454 TIMM9Q9Y5J7 89 aa1.43□□□□□ -2.18
CCNL1-220ENST00000478454 HSPE1-MOB4S4R3N1 261 aa1.43□□□□□ -2.18
CCNL1-220ENST00000478454 PHRF1Q9P1Y6 1649 aaKnown RBP1.43□□□□□ -2.18
CCNL1-220ENST00000478454 NYNRINQ9P2P1 1898 aaKnown RBP1.43□□□□□ -2.18
CCNL1-220ENST00000478454 PTPRBP23467 1997 aa1.43□□□□□ -2.18
CCNL1-220ENST00000478454 QSER1Q2KHR3 1735 aa1.43□□□□□ -2.18
CCNL1-220ENST00000478454 CRYBG1Q9Y4K1 1723 aa1.43□□□□□ -2.18
CCNL1-220ENST00000478454 ALPK3Q96L96 1907 aa1.42□□□□□ -2.18
CCNL1-220ENST00000478454 KDM6AO15550 1401 aaPredicted RBP1.42□□□□□ -2.18
CCNL1-220ENST00000478454 SLIT2O94813 1529 aa1.42□□□□□ -2.18
CCNL1-220ENST00000478454 LRP5O75197 1615 aa1.42□□□□□ -2.18
CCNL1-220ENST00000478454 CLTCL1P53675 1640 aa1.42□□□□□ -2.18
CCNL1-220ENST00000478454 A0A1W2PRS3 328 aa1.42□□□□□ -2.18
CCNL1-220ENST00000478454 ZNF736B4DX44 427 aaPredicted RBP1.42□□□□□ -2.18
CCNL1-220ENST00000478454 C19orf84I3L1E1 186 aa1.42□□□□□ -2.18
CCNL1-220ENST00000478454 SDCBPO00560 298 aaPredicted RBP1.42□□□□□ -2.18
CCNL1-220ENST00000478454 LYRM1O43325 122 aa1.42□□□□□ -2.18
CCNL1-220ENST00000478454 OR1I1O60431 355 aa1.42□□□□□ -2.18
CCNL1-220ENST00000478454 YPEL1O60688 119 aa1.42□□□□□ -2.18
CCNL1-220ENST00000478454 TIMM17BO60830 172 aa1.42□□□□□ -2.18
CCNL1-220ENST00000478454 TNFP01375 233 aa1.42□□□□□ -2.18
CCNL1-220ENST00000478454 MSMBP08118 114 aa1.42□□□□□ -2.18
CCNL1-220ENST00000478454 CRYGAP11844 174 aa1.42□□□□□ -2.18
CCNL1-220ENST00000478454 NFYAP23511 347 aaPredicted RBP1.42□□□□□ -2.18
CCNL1-220ENST00000478454 PEBP1P30086 187 aaKnown RBP1.42□□□□□ -2.18
CCNL1-220ENST00000478454 CKS2P33552 79 aa1.42□□□□□ -2.18
CCNL1-220ENST00000478454 BTG2P78543 158 aa1.42□□□□□ -2.18
CCNL1-220ENST00000478454 ZNF846Q147U1 533 aa1.42□□□□□ -2.18
CCNL1-220ENST00000478454 LINC01545Q5VT33 79 aa1.42□□□□□ -2.18
CCNL1-220ENST00000478454 TTC9CQ8N5M4 171 aa1.42□□□□□ -2.18
CCNL1-220ENST00000478454 C3orf56Q8N813 242 aa1.42□□□□□ -2.18
CCNL1-220ENST00000478454 PFN4Q8NHR9 129 aa1.42□□□□□ -2.18
CCNL1-220ENST00000478454 CLDND2Q8NHS1 167 aa1.42□□□□□ -2.18
CCNL1-220ENST00000478454 AQP3Q92482 292 aa1.42□□□□□ -2.18
CCNL1-220ENST00000478454 UPK3BQ9BT76 320 aa1.42□□□□□ -2.18
CCNL1-220ENST00000478454 SLC35B3Q9H1N7 401 aa1.42□□□□□ -2.18
CCNL1-220ENST00000478454 BCL2L10Q9HD36 194 aa1.42□□□□□ -2.18
CCNL1-220ENST00000478454 RPRMQ9NS64 109 aa1.42□□□□□ -2.18
CCNL1-220ENST00000478454 LSM2Q9Y333 95 aaKnown RBP1.42□□□□□ -2.18
CCNL1-220ENST00000478454 TPRKBQ9Y3C4 175 aa1.42□□□□□ -2.18
CCNL1-220ENST00000478454 AP4S1Q9Y587 144 aa1.42□□□□□ -2.18
CCNL1-220ENST00000478454 DNAJC15Q9Y5T4 150 aa1.42□□□□□ -2.18
CCNL1-220ENST00000478454 CHCHD2Q9Y6H1 151 aaPredicted RBP1.42□□□□□ -2.18
CCNL1-220ENST00000478454 COL5A3P25940 1745 aaPredicted RBP1.42□□□□□ -2.18
CCNL1-220ENST00000478454 TRPM3Q9HCF6 1732 aaPredicted RBP1.42□□□□□ -2.18
CCNL1-220ENST00000478454 KIAA1551Q9HCM1 1747 aa1.42□□□□□ -2.18
CCNL1-220ENST00000478454 KTN1Q86UP2 1357 aaKnown RBP1.42□□□□□ -2.18
CCNL1-220ENST00000478454 SBF2Q86WG5 1849 aa1.42□□□□□ -2.18
CCNL1-220ENST00000478454 C1orf167Q5SNV9 1468 aa1.42□□□□□ -2.18
CCNL1-220ENST00000478454 PXDNQ92626 1479 aa1.42□□□□□ -2.18
CCNL1-220ENST00000478454 ADGRB1O14514 1584 aa1.42□□□□□ -2.18
CCNL1-220ENST00000478454 CHD3Q12873 2000 aaKnown RBP1.42□□□□□ -2.18
CCNL1-220ENST00000478454 PIK3C2AO00443 1686 aa1.42□□□□□ -2.18
CCNL1-220ENST00000478454 ZNF831Q5JPB2 1677 aa1.42□□□□□ -2.18
CCNL1-220ENST00000478454 RGPD8O14715 1765 aaPredicted RBP1.42□□□□□ -2.18
CCNL1-220ENST00000478454 COL14A1Q05707 1796 aaKnown RBP1.42□□□□□ -2.18
CCNL1-220ENST00000478454 BLMP54132 1417 aaPredicted RBP1.41□□□□□ -2.18
CCNL1-220ENST00000478454 NSD3Q9BZ95 1437 aa1.41□□□□□ -2.18
CCNL1-220ENST00000478454 RGPD1P0DJD0 1748 aa1.41□□□□□ -2.18
CCNL1-220ENST00000478454 ABCA3Q99758 1704 aa1.41□□□□□ -2.18
CCNL1-220ENST00000478454 PARP4Q9UKK3 1724 aaKnown RBP1.41□□□□□ -2.18
CCNL1-220ENST00000478454 TRBV20-1A0A075B6N2 111 aa1.41□□□□□ -2.18
CCNL1-220ENST00000478454 TRAV3A0A0B4J244 114 aa1.41□□□□□ -2.18
CCNL1-220ENST00000478454 LOC107984156A0A0G2JMH3 177 aa1.41□□□□□ -2.18
CCNL1-220ENST00000478454 C3orf85A0A1B0GTC6 90 aa1.41□□□□□ -2.18
CCNL1-220ENST00000478454 LOC107986453A0A1B0GWG9 222 aa1.41□□□□□ -2.18
CCNL1-220ENST00000478454 FAM24AA6NFZ4 105 aa1.41□□□□□ -2.18
CCNL1-220ENST00000478454 MCRIP1C9JLW8 97 aa1.41□□□□□ -2.18
CCNL1-220ENST00000478454 H3BPC8 53 aa1.41□□□□□ -2.18
CCNL1-220ENST00000478454 CD3DP04234 171 aa1.41□□□□□ -2.18
CCNL1-220ENST00000478454 FABP4P15090 132 aa1.41□□□□□ -2.18
CCNL1-220ENST00000478454 XCL1P47992 114 aa1.41□□□□□ -2.18
CCNL1-220ENST00000478454 KRTAP12-1P59990 96 aa1.41□□□□□ -2.18
CCNL1-220ENST00000478454 ZNF117Q03924 483 aa1.41□□□□□ -2.18
CCNL1-220ENST00000478454 SS18Q15532 418 aa1.41□□□□□ -2.18
CCNL1-220ENST00000478454 FAM229BQ4G0N7 80 aa1.41□□□□□ -2.18
CCNL1-220ENST00000478454 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.41□□□□□ -2.18
CCNL1-220ENST00000478454 MIC13Q5XKP0 118 aa1.41□□□□□ -2.18
CCNL1-220ENST00000478454 ARL17AQ8IVW1 177 aa1.41□□□□□ -2.18
CCNL1-220ENST00000478454 OR4X2Q8NGF9 303 aa1.41□□□□□ -2.18
CCNL1-220ENST00000478454 DIRC1Q969H9 104 aa1.41□□□□□ -2.18
CCNL1-220ENST00000478454 MRPS24Q96EL2 167 aaKnown RBP1.41□□□□□ -2.18
CCNL1-220ENST00000478454 VAMP8Q9BV40 100 aa1.41□□□□□ -2.18
CCNL1-220ENST00000478454 DPY30Q9C005 99 aa1.41□□□□□ -2.18
CCNL1-220ENST00000478454 CST11Q9H112 138 aa1.41□□□□□ -2.18
CCNL1-220ENST00000478454 C16orf95Q9H693 158 aa1.41□□□□□ -2.18
CCNL1-220ENST00000478454 TAS2R4Q9NYW5 299 aa1.41□□□□□ -2.18
CCNL1-220ENST00000478454 ZNF443Q9Y2A4 671 aaPredicted RBP1.41□□□□□ -2.18
CCNL1-220ENST00000478454 SERP1Q9Y6X1 66 aa1.41□□□□□ -2.18
CCNL1-220ENST00000478454 LY96Q9Y6Y9 160 aa1.41□□□□□ -2.18
CCNL1-220ENST00000478454 PRRC2BQ5JSZ5 2229 aaKnown RBP1.41□□□□□ -2.18
CCNL1-220ENST00000478454 ATP7BP35670 1465 aa1.41□□□□□ -2.18
CCNL1-220ENST00000478454 BCL9LQ86UU0 1499 aa1.41□□□□□ -2.18
CCNL1-220ENST00000478454 RALGAPBQ86X10 1494 aa1.41□□□□□ -2.18
CCNL1-220ENST00000478454 TOPAZ1Q8N9V7 1692 aa1.41□□□□□ -2.18
CCNL1-220ENST00000478454 FAM208AQ9UK61 1670 aaKnown RBP1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 293.3 ms