RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 FAM159AQ6UWV7 190 aa7.28□□□□□ -1.24
HDAC6-222ENST00000478095 TMEM183AQ8IXX5 376 aa7.28□□□□□ -1.24
HDAC6-222ENST00000478095 ZNF680Q8NEM1 530 aa7.28□□□□□ -1.24
HDAC6-222ENST00000478095 KLF12Q9Y4X4 402 aa7.28□□□□□ -1.24
HDAC6-222ENST00000478095 PLECQ15149 4684 aaKnown RBP7.28□□□□□ -1.24
HDAC6-222ENST00000478095 IGHV4-4A0A075B6R2 117 aa7.27□□□□□ -1.25
HDAC6-222ENST00000478095 LCE6AA0A183 80 aa7.27□□□□□ -1.25
HDAC6-222ENST00000478095 FBLL1A6NHQ2 334 aaKnown RBP7.27□□□□□ -1.25
HDAC6-222ENST00000478095 TEX46H3BTG2 121 aa7.27□□□□□ -1.25
HDAC6-222ENST00000478095 TCL1AP56279 114 aa7.27□□□□□ -1.25
HDAC6-222ENST00000478095 ZNF415Q09FC8 603 aa7.27□□□□□ -1.25
HDAC6-222ENST00000478095 SAPCD1Q5SSQ6 148 aa7.27□□□□□ -1.25
HDAC6-222ENST00000478095 Q6ZTI0 123 aa7.27□□□□□ -1.25
HDAC6-222ENST00000478095 FMC1Q96HJ9 113 aa7.27□□□□□ -1.25
HDAC6-222ENST00000478095 TCEAL7Q9BRU2 100 aa7.27□□□□□ -1.25
HDAC6-222ENST00000478095 MANBALQ9NQG1 85 aa7.27□□□□□ -1.25
HDAC6-222ENST00000478095 MRPL16Q9NX20 251 aaKnown RBP7.27□□□□□ -1.25
HDAC6-222ENST00000478095 MDFICQ9P1T7 246 aa7.27□□□□□ -1.25
HDAC6-222ENST00000478095 C11orf21Q9P2W6 132 aa7.27□□□□□ -1.25
HDAC6-222ENST00000478095 RYR3Q15413 4870 aa7.26□□□□□ -1.25
HDAC6-222ENST00000478095 TRGV1A0A0A0MS02 117 aa7.26□□□□□ -1.25
HDAC6-222ENST00000478095 GNRH2O43555 120 aa7.26□□□□□ -1.25
HDAC6-222ENST00000478095 PFN1P07737 140 aaKnown RBP7.26□□□□□ -1.25
HDAC6-222ENST00000478095 DAZ2Q13117 558 aaKnown RBP7.26□□□□□ -1.25
HDAC6-222ENST00000478095 IBA57Q5T440 356 aaKnown RBP7.26□□□□□ -1.25
HDAC6-222ENST00000478095 NHLRC2Q8NBF2 726 aa7.26□□□□□ -1.25
HDAC6-222ENST00000478095 SACSQ9NZJ4 4579 aa7.25□□□□□ -1.25
HDAC6-222ENST00000478095 TENM2Q9NT68 2774 aa7.25□□□□□ -1.25
HDAC6-222ENST00000478095 RYR2Q92736 4967 aa7.25□□□□□ -1.25
HDAC6-222ENST00000478095 TRGV11A0A075B6L2 103 aa7.25□□□□□ -1.25
HDAC6-222ENST00000478095 F5H768 121 aa7.25□□□□□ -1.25
HDAC6-222ENST00000478095 LY6G6CO95867 125 aa7.25□□□□□ -1.25
HDAC6-222ENST00000478095 LTAP01374 205 aa7.25□□□□□ -1.25
HDAC6-222ENST00000478095 IFNA1P01562 189 aa7.25□□□□□ -1.25
HDAC6-222ENST00000478095 TYMSP04818 313 aa7.25□□□□□ -1.25
HDAC6-222ENST00000478095 ATP5G1P05496 136 aa7.25□□□□□ -1.25
HDAC6-222ENST00000478095 LINC00612Q8N6U2 182 aa7.25□□□□□ -1.25
HDAC6-222ENST00000478095 LINC00476Q8WZB0 136 aa7.25□□□□□ -1.25
HDAC6-222ENST00000478095 ZC2HC1AQ96GY0 325 aa7.25□□□□□ -1.25
HDAC6-222ENST00000478095 SDF2L1Q9HCN8 221 aa7.25□□□□□ -1.25
HDAC6-222ENST00000478095 APLNQ9ULZ1 77 aa7.25□□□□□ -1.25
HDAC6-222ENST00000478095 TRGV2A0A075B6R0 118 aa7.24□□□□□ -1.25
HDAC6-222ENST00000478095 IGHV3-16A0A0C4DH30 117 aa7.24□□□□□ -1.25
HDAC6-222ENST00000478095 SPINK4O60575 86 aa7.24□□□□□ -1.25
HDAC6-222ENST00000478095 BCL2P10415 239 aa7.24□□□□□ -1.25
HDAC6-222ENST00000478095 CRIP1P50238 77 aa7.24□□□□□ -1.25
HDAC6-222ENST00000478095 TDRG1Q3Y452 100 aa7.24□□□□□ -1.25
HDAC6-222ENST00000478095 TMEM88Q6PEY1 159 aa7.24□□□□□ -1.25
HDAC6-222ENST00000478095 NDUFAF3Q9BU61 184 aa7.24□□□□□ -1.25
HDAC6-222ENST00000478095 DERL1Q9BUN8 251 aa7.24□□□□□ -1.25
HDAC6-222ENST00000478095 ZFP30Q9Y2G7 519 aa7.24□□□□□ -1.25
HDAC6-222ENST00000478095 DYNC2H1Q8NCM8 4307 aaKnown RBP7.24□□□□□ -1.25
HDAC6-222ENST00000478095 TRBV6-1A0A0K0K1D8 114 aa7.23□□□□□ -1.25
HDAC6-222ENST00000478095 M0R036 132 aa7.23□□□□□ -1.25
HDAC6-222ENST00000478095 SH2D1AO60880 128 aa7.23□□□□□ -1.25
HDAC6-222ENST00000478095 IGHV3-53P01767 116 aa7.23□□□□□ -1.25
HDAC6-222ENST00000478095 BLOC1S1P78537 153 aa7.23□□□□□ -1.25
HDAC6-222ENST00000478095 MEF2BQ02080 365 aaPredicted RBP7.23□□□□□ -1.25
HDAC6-222ENST00000478095 BAGE2Q86Y30 109 aa7.23□□□□□ -1.25
HDAC6-222ENST00000478095 PCNPQ8WW12 178 aaKnown RBP7.23□□□□□ -1.25
HDAC6-222ENST00000478095 C11orf52Q96A22 123 aa7.23□□□□□ -1.25
HDAC6-222ENST00000478095 KCNS1Q96KK3 526 aa7.23□□□□□ -1.25
HDAC6-222ENST00000478095 IGKV3D-20A0A0C4DH25 116 aa7.22□□□□□ -1.25
HDAC6-222ENST00000478095 FABP5P3A8MUU1 101 aa7.22□□□□□ -1.25
HDAC6-222ENST00000478095 ORM1P02763 201 aa7.22□□□□□ -1.25
HDAC6-222ENST00000478095 HOXA5P20719 270 aa7.22□□□□□ -1.25
HDAC6-222ENST00000478095 RPL35P42766 123 aaKnown RBP7.22□□□□□ -1.25
HDAC6-222ENST00000478095 TCTAP57738 103 aa7.22□□□□□ -1.25
HDAC6-222ENST00000478095 OR5I1Q13606 314 aa7.22□□□□□ -1.25
HDAC6-222ENST00000478095 FAM162BQ5T6X4 162 aa7.22□□□□□ -1.25
HDAC6-222ENST00000478095 VAX2Q9UIW0 290 aa7.22□□□□□ -1.25
HDAC6-222ENST00000478095 TRAV26-1A0A087WT03 109 aa7.21□□□□□ -1.26
HDAC6-222ENST00000478095 TMSB15BA0A087X1C1 80 aa7.21□□□□□ -1.26
HDAC6-222ENST00000478095 A0A0J9YY99 117 aa7.21□□□□□ -1.26
HDAC6-222ENST00000478095 RAB19A4D1S5 217 aa7.21□□□□□ -1.26
HDAC6-222ENST00000478095 B4DEV8 164 aa7.21□□□□□ -1.26
HDAC6-222ENST00000478095 PDE6DO43924 150 aa7.21□□□□□ -1.26
HDAC6-222ENST00000478095 S100A9P06702 114 aaKnown RBP7.21□□□□□ -1.26
HDAC6-222ENST00000478095 LGALS9BQ3B8N2 356 aa7.21□□□□□ -1.26
HDAC6-222ENST00000478095 CENPWQ5EE01 88 aa7.21□□□□□ -1.26
HDAC6-222ENST00000478095 PRR27Q6MZM9 219 aa7.21□□□□□ -1.26
HDAC6-222ENST00000478095 COX8CQ7Z4L0 72 aa7.21□□□□□ -1.26
HDAC6-222ENST00000478095 TXNDC17Q9BRA2 123 aa7.21□□□□□ -1.26
HDAC6-222ENST00000478095 SPXQ9BT56 116 aa7.21□□□□□ -1.26
HDAC6-222ENST00000478095 MED9Q9NWA0 146 aa7.21□□□□□ -1.26
HDAC6-222ENST00000478095 ALMS1Q8TCU4 4167 aa7.2□□□□□ -1.26
HDAC6-222ENST00000478095 GRIFINA4D1Z8 144 aa7.2□□□□□ -1.26
HDAC6-222ENST00000478095 C9JCJ5 164 aa7.2□□□□□ -1.26
HDAC6-222ENST00000478095 M0R2P5 195 aa7.2□□□□□ -1.26
HDAC6-222ENST00000478095 NUDT3O95989 172 aa7.2□□□□□ -1.26
HDAC6-222ENST00000478095 SFTA3P0C7M3 94 aa7.2□□□□□ -1.26
HDAC6-222ENST00000478095 S100A4P26447 101 aaKnown RBP7.2□□□□□ -1.26
HDAC6-222ENST00000478095 ZNF674Q2M3X9 581 aa7.2□□□□□ -1.26
HDAC6-222ENST00000478095 TOR2AQ5JU69 321 aa7.2□□□□□ -1.26
HDAC6-222ENST00000478095 LGALS9CQ6DKI2 356 aa7.2□□□□□ -1.26
HDAC6-222ENST00000478095 TEX261Q6UWH6 196 aa7.2□□□□□ -1.26
HDAC6-222ENST00000478095 LYPD6BQ8NI32 183 aa7.2□□□□□ -1.26
HDAC6-222ENST00000478095 FAM210BQ96KR6 192 aa7.2□□□□□ -1.26
HDAC6-222ENST00000478095 TRBV20OR9-2A0A075B6H5 130 aa7.19□□□□□ -1.26
HDAC6-222ENST00000478095 RBFOX3A6NFN3 312 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms