RNA–Protein interactions for RNA: ENST00000477928.1

SOX2-OT-208, SOX2 overlapping transcript, humanhuman

TSL 2 BASIC

Gene SOX2-OT, Length 902 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-208ENST00000477928 CCL18P55774 89 aa9.65□□□□□ -0.86
SOX2-OT-208ENST00000477928 SMUG1Q53HV7 270 aa9.65□□□□□ -0.86
SOX2-OT-208ENST00000477928 Q6ZNX1 250 aa9.65□□□□□ -0.86
SOX2-OT-208ENST00000477928 MBD3L1Q8WWY6 194 aa9.65□□□□□ -0.86
SOX2-OT-208ENST00000477928 TVP23CQ96ET8 276 aa9.65□□□□□ -0.86
SOX2-OT-208ENST00000477928 SDF2L1Q9HCN8 221 aa9.65□□□□□ -0.86
SOX2-OT-208ENST00000477928 IFNA7P01567 189 aa9.64□□□□□ -0.87
SOX2-OT-208ENST00000477928 RAB5CP51148 216 aa9.64□□□□□ -0.87
SOX2-OT-208ENST00000477928 OR5I1Q13606 314 aa9.64□□□□□ -0.87
SOX2-OT-208ENST00000477928 TMUB2Q71RG4 321 aa9.64□□□□□ -0.87
SOX2-OT-208ENST00000477928 TMPRSS5Q9H3S3 457 aa9.64□□□□□ -0.87
SOX2-OT-208ENST00000477928 TRAV26-1A0A087WT03 109 aa9.63□□□□□ -0.87
SOX2-OT-208ENST00000477928 TRBV6-1A0A0K0K1D8 114 aa9.63□□□□□ -0.87
SOX2-OT-208ENST00000477928 PEX7O00628 323 aa9.63□□□□□ -0.87
SOX2-OT-208ENST00000477928 CIDEAO60543 219 aa9.63□□□□□ -0.87
SOX2-OT-208ENST00000477928 NUDT3O95989 172 aa9.63□□□□□ -0.87
SOX2-OT-208ENST00000477928 HOXA5P20719 270 aa9.63□□□□□ -0.87
SOX2-OT-208ENST00000477928 FGF8P55075 233 aaPredicted RBP9.63□□□□□ -0.87
SOX2-OT-208ENST00000477928 TMEM183BQ1AE95 376 aa9.63□□□□□ -0.87
SOX2-OT-208ENST00000477928 MUC21Q5SSG8 566 aa9.63□□□□□ -0.87
SOX2-OT-208ENST00000477928 LINC00336Q6ZUF6 198 aa9.63□□□□□ -0.87
SOX2-OT-208ENST00000477928 COX8CQ7Z4L0 72 aa9.63□□□□□ -0.87
SOX2-OT-208ENST00000477928 TMEM183AQ8IXX5 376 aa9.63□□□□□ -0.87
SOX2-OT-208ENST00000477928 ZFP30Q9Y2G7 519 aa9.63□□□□□ -0.87
SOX2-OT-208ENST00000477928 DNAH2Q9P225 4427 aa9.63□□□□□ -0.87
SOX2-OT-208ENST00000477928 NACAE9PAV3 2078 aa9.63□□□□□ -0.87
SOX2-OT-208ENST00000477928 IGHV3-16A0A0C4DH30 117 aa9.62□□□□□ -0.87
SOX2-OT-208ENST00000477928 M0R2P5 195 aa9.62□□□□□ -0.87
SOX2-OT-208ENST00000477928 GCGP01275 180 aa9.62□□□□□ -0.87
SOX2-OT-208ENST00000477928 C1QBP02746 253 aa9.62□□□□□ -0.87
SOX2-OT-208ENST00000477928 S100A9P06702 114 aaKnown RBP9.62□□□□□ -0.87
SOX2-OT-208ENST00000477928 PTH2Q96A98 100 aa9.62□□□□□ -0.87
SOX2-OT-208ENST00000477928 FMC1Q96HJ9 113 aa9.62□□□□□ -0.87
SOX2-OT-208ENST00000477928 MDFICQ9P1T7 246 aa9.62□□□□□ -0.87
SOX2-OT-208ENST00000477928 PRO0255Q9UI72 69 aa9.62□□□□□ -0.87
SOX2-OT-208ENST00000477928 DNAH17Q9UFH2 4485 aa9.62□□□□□ -0.87
SOX2-OT-208ENST00000477928 HERC2O95714 4834 aa9.61□□□□□ -0.87
SOX2-OT-208ENST00000477928 FAT2Q9NYQ8 4349 aa9.61□□□□□ -0.87
SOX2-OT-208ENST00000477928 A0A0J9YY99 117 aa9.61□□□□□ -0.87
SOX2-OT-208ENST00000477928 TYMSP04818 313 aa9.61□□□□□ -0.87
SOX2-OT-208ENST00000477928 UBE2G2P60604 165 aa9.61□□□□□ -0.87
SOX2-OT-208ENST00000477928 Q6ZR54 194 aa9.61□□□□□ -0.87
SOX2-OT-208ENST00000477928 PRNTQ86SH4 94 aa9.61□□□□□ -0.87
SOX2-OT-208ENST00000477928 NAGKQ9UJ70 344 aa9.61□□□□□ -0.87
SOX2-OT-208ENST00000477928 TRAV4A0A0B4J268 109 aa9.6□□□□□ -0.87
SOX2-OT-208ENST00000477928 A0A1B0GVY2 172 aa9.6□□□□□ -0.87
SOX2-OT-208ENST00000477928 FABP5P3A8MUU1 101 aa9.6□□□□□ -0.87
SOX2-OT-208ENST00000477928 TEX46H3BTG2 121 aa9.6□□□□□ -0.87
SOX2-OT-208ENST00000477928 H2AFB1P0C5Y9 115 aa9.6□□□□□ -0.87
SOX2-OT-208ENST00000477928 PIK3CD-AS1Q5SR53 167 aa9.6□□□□□ -0.87
SOX2-OT-208ENST00000477928 SLC51BQ86UW2 128 aa9.6□□□□□ -0.87
SOX2-OT-208ENST00000477928 FAM213BQ8TBF2 198 aa9.6□□□□□ -0.87
SOX2-OT-208ENST00000477928 SFT2D1Q8WV19 159 aa9.6□□□□□ -0.87
SOX2-OT-208ENST00000477928 TXNDC17Q9BRA2 123 aa9.6□□□□□ -0.87
SOX2-OT-208ENST00000477928 UPK3BQ9BT76 320 aa9.6□□□□□ -0.87
SOX2-OT-208ENST00000477928 MRPL16Q9NX20 251 aaKnown RBP9.6□□□□□ -0.87
SOX2-OT-208ENST00000477928 TRAV1-1A0A0B4J248 108 aa9.59□□□□□ -0.87
SOX2-OT-208ENST00000477928 BTF3P20290 206 aaKnown RBP9.59□□□□□ -0.87
SOX2-OT-208ENST00000477928 UBE2G1P62253 170 aa9.59□□□□□ -0.87
SOX2-OT-208ENST00000477928 SOHLH1Q5JUK2 328 aa9.59□□□□□ -0.87
SOX2-OT-208ENST00000477928 Q86TA4 180 aa9.59□□□□□ -0.87
SOX2-OT-208ENST00000477928 SGK494Q96LW2 274 aa9.59□□□□□ -0.87
SOX2-OT-208ENST00000477928 C8orf49Q96NF6 230 aa9.59□□□□□ -0.87
SOX2-OT-208ENST00000477928 LINC00588Q9Y4M8 146 aa9.59□□□□□ -0.87
SOX2-OT-208ENST00000477928 PAX4O43316 350 aa9.58□□□□□ -0.88
SOX2-OT-208ENST00000477928 GNRH2O43555 120 aa9.58□□□□□ -0.88
SOX2-OT-208ENST00000477928 ORM1P02763 201 aa9.58□□□□□ -0.88
SOX2-OT-208ENST00000477928 ZNF80P51504 273 aaPredicted RBP9.58□□□□□ -0.88
SOX2-OT-208ENST00000477928 CRYBA4P53673 196 aa9.58□□□□□ -0.88
SOX2-OT-208ENST00000477928 CST9LP1Q5W188 147 aa9.58□□□□□ -0.88
SOX2-OT-208ENST00000477928 AKAP14Q86UN6 197 aa9.58□□□□□ -0.88
SOX2-OT-208ENST00000477928 ZNRF2Q8NHG8 242 aa9.58□□□□□ -0.88
SOX2-OT-208ENST00000477928 VSIG2Q96IQ7 327 aa9.58□□□□□ -0.88
SOX2-OT-208ENST00000477928 HHLA3Q9XRX5 114 aa9.58□□□□□ -0.88
SOX2-OT-208ENST00000477928 ICOSQ9Y6W8 199 aa9.58□□□□□ -0.88
SOX2-OT-208ENST00000477928 KIAA1109Q2LD37 5005 aa9.57□□□□□ -0.88
SOX2-OT-208ENST00000477928 TRGV4A0A0C4DH28 118 aa9.57□□□□□ -0.88
SOX2-OT-208ENST00000477928 PAGE4O60829 102 aa9.57□□□□□ -0.88
SOX2-OT-208ENST00000477928 LTAP01374 205 aa9.57□□□□□ -0.88
SOX2-OT-208ENST00000477928 SULT1A2P50226 295 aa9.57□□□□□ -0.88
SOX2-OT-208ENST00000477928 FHL2Q14192 279 aa9.57□□□□□ -0.88
SOX2-OT-208ENST00000477928 MRPL23Q16540 153 aaKnown RBP9.57□□□□□ -0.88
SOX2-OT-208ENST00000477928 DNLZQ5SXM8 178 aa9.57□□□□□ -0.88
SOX2-OT-208ENST00000477928 LINC00479Q96M42 142 aa9.57□□□□□ -0.88
SOX2-OT-208ENST00000477928 MANBALQ9NQG1 85 aa9.57□□□□□ -0.88
SOX2-OT-208ENST00000477928 MRPS16Q9Y3D3 137 aaKnown RBP9.57□□□□□ -0.88
SOX2-OT-208ENST00000477928 A0A096LPF7 62 aa9.56□□□□□ -0.88
SOX2-OT-208ENST00000477928 TRAV34A0A0B4J273 112 aa9.56□□□□□ -0.88
SOX2-OT-208ENST00000477928 A0A1W2PPQ1 181 aa9.56□□□□□ -0.88
SOX2-OT-208ENST00000477928 PRSS29PA6NIE9 313 aa9.56□□□□□ -0.88
SOX2-OT-208ENST00000477928 IGHV3-53P01767 116 aa9.56□□□□□ -0.88
SOX2-OT-208ENST00000477928 AKR1C3P42330 323 aa9.56□□□□□ -0.88
SOX2-OT-208ENST00000477928 FAM162BQ5T6X4 162 aa9.56□□□□□ -0.88
SOX2-OT-208ENST00000477928 SH2D6Q7Z4S9 175 aa9.56□□□□□ -0.88
SOX2-OT-208ENST00000477928 OR4C5Q8NGB2 326 aa9.56□□□□□ -0.88
SOX2-OT-208ENST00000477928 C9orf85Q96MD7 179 aa9.56□□□□□ -0.88
SOX2-OT-208ENST00000477928 TTC32Q5I0X7 151 aa9.55□□□□□ -0.88
SOX2-OT-208ENST00000477928 KRTAP1-5Q9BYS1 174 aa9.55□□□□□ -0.88
SOX2-OT-208ENST00000477928 C11orf21Q9P2W6 132 aa9.55□□□□□ -0.88
SOX2-OT-208ENST00000477928 PKHD1P08F94 4074 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms