RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 GNG4P50150 75 aa6.82□□□□□ -1.32
SMARCB1-206ENST00000477836 PSG3Q16557 428 aa6.82□□□□□ -1.32
SMARCB1-206ENST00000477836 PSMG4Q5JS54 123 aa6.82□□□□□ -1.32
SMARCB1-206ENST00000477836 C10orf91Q5T1B1 145 aa6.82□□□□□ -1.32
SMARCB1-206ENST00000477836 TMEM75Q8N9X5 138 aa6.82□□□□□ -1.32
SMARCB1-206ENST00000477836 NAT8Q9UHE5 227 aa6.82□□□□□ -1.32
SMARCB1-206ENST00000477836 TRAV34A0A0B4J273 112 aa6.81□□□□□ -1.32
SMARCB1-206ENST00000477836 FBLL1A6NHQ2 334 aaKnown RBP6.81□□□□□ -1.32
SMARCB1-206ENST00000477836 APOC3P02656 99 aa6.81□□□□□ -1.32
SMARCB1-206ENST00000477836 TAS2R60P59551 318 aa6.81□□□□□ -1.32
SMARCB1-206ENST00000477836 PNRC1Q12796 327 aaPredicted RBP6.81□□□□□ -1.32
SMARCB1-206ENST00000477836 TMEM183BQ1AE95 376 aa6.81□□□□□ -1.32
SMARCB1-206ENST00000477836 SVBPQ8N300 66 aa6.81□□□□□ -1.32
SMARCB1-206ENST00000477836 C15orf53Q8NAA6 179 aa6.81□□□□□ -1.32
SMARCB1-206ENST00000477836 OR10J6PQ8NGY7 276 aa6.81□□□□□ -1.32
SMARCB1-206ENST00000477836 C20orf173Q96LM9 149 aa6.81□□□□□ -1.32
SMARCB1-206ENST00000477836 TRBV20OR9-2A0A075B6H5 130 aa6.8□□□□□ -1.32
SMARCB1-206ENST00000477836 TRAV8-1A0A0A6YYK1 113 aa6.8□□□□□ -1.32
SMARCB1-206ENST00000477836 TRBV6-1A0A0K0K1D8 114 aa6.8□□□□□ -1.32
SMARCB1-206ENST00000477836 RBAKDNA6NC62 111 aa6.8□□□□□ -1.32
SMARCB1-206ENST00000477836 ZNF705FA8MVS1 300 aaPredicted RBP6.8□□□□□ -1.32
SMARCB1-206ENST00000477836 PRAC2D3DTV9 90 aa6.8□□□□□ -1.32
SMARCB1-206ENST00000477836 M0R036 132 aa6.8□□□□□ -1.32
SMARCB1-206ENST00000477836 PRB4P10163 310 aaPredicted RBP6.8□□□□□ -1.32
SMARCB1-206ENST00000477836 FLI1Q01543 452 aaPredicted RBP6.8□□□□□ -1.32
SMARCB1-206ENST00000477836 ADIRFQ15847 76 aa6.8□□□□□ -1.32
SMARCB1-206ENST00000477836 TMEM241Q24JQ0 296 aa6.8□□□□□ -1.32
SMARCB1-206ENST00000477836 ACTL10Q5JWF8 245 aa6.8□□□□□ -1.32
SMARCB1-206ENST00000477836 FAM222AQ5U5X8 452 aa6.8□□□□□ -1.32
SMARCB1-206ENST00000477836 Q8TAT8 98 aa6.8□□□□□ -1.32
SMARCB1-206ENST00000477836 TVP23CQ96ET8 276 aa6.8□□□□□ -1.32
SMARCB1-206ENST00000477836 SMIM12Q96EX1 92 aa6.8□□□□□ -1.32
SMARCB1-206ENST00000477836 IGF2BP2-AS1Q96M15 143 aa6.8□□□□□ -1.32
SMARCB1-206ENST00000477836 LINC00479Q96M42 142 aa6.8□□□□□ -1.32
SMARCB1-206ENST00000477836 NDFIP1Q9BT67 221 aa6.8□□□□□ -1.32
SMARCB1-206ENST00000477836 PGPEP1Q9NXJ5 209 aa6.8□□□□□ -1.32
SMARCB1-206ENST00000477836 DKK2Q9UBU2 259 aa6.8□□□□□ -1.32
SMARCB1-206ENST00000477836 KLF12Q9Y4X4 402 aa6.8□□□□□ -1.32
SMARCB1-206ENST00000477836 TMEM189A5PLL7 270 aa6.79□□□□□ -1.32
SMARCB1-206ENST00000477836 PGPEP1LA6NFU8 196 aa6.79□□□□□ -1.32
SMARCB1-206ENST00000477836 NPIPB6E9PJ23 425 aa6.79□□□□□ -1.32
SMARCB1-206ENST00000477836 SNAPINO95295 136 aa6.79□□□□□ -1.32
SMARCB1-206ENST00000477836 LTAP01374 205 aa6.79□□□□□ -1.32
SMARCB1-206ENST00000477836 HIST1H1AQ02539 215 aaPredicted RBP6.79□□□□□ -1.32
SMARCB1-206ENST00000477836 TMEM78Q5T7P6 136 aa6.79□□□□□ -1.32
SMARCB1-206ENST00000477836 EBLN2Q6P2I7 272 aa6.79□□□□□ -1.32
SMARCB1-206ENST00000477836 PRNTQ86SH4 94 aa6.79□□□□□ -1.32
SMARCB1-206ENST00000477836 OR8A1Q8NGG7 326 aa6.79□□□□□ -1.32
SMARCB1-206ENST00000477836 SGK494Q96LW2 274 aa6.79□□□□□ -1.32
SMARCB1-206ENST00000477836 XCL2Q9UBD3 114 aa6.79□□□□□ -1.32
SMARCB1-206ENST00000477836 PSG8Q9UQ74 426 aa6.79□□□□□ -1.32
SMARCB1-206ENST00000477836 LY96Q9Y6Y9 160 aa6.79□□□□□ -1.32
SMARCB1-206ENST00000477836 F6UB75 175 aa6.78□□□□□ -1.32
SMARCB1-206ENST00000477836 IGLV2-11P01706 119 aa6.78□□□□□ -1.32
SMARCB1-206ENST00000477836 MGST1P10620 155 aaKnown RBP6.78□□□□□ -1.32
SMARCB1-206ENST00000477836 CCL18P55774 89 aa6.78□□□□□ -1.32
SMARCB1-206ENST00000477836 RPL23P62829 140 aaKnown RBP6.78□□□□□ -1.32
SMARCB1-206ENST00000477836 HAMPP81172 84 aa6.78□□□□□ -1.32
SMARCB1-206ENST00000477836 ERCC8Q13216 396 aa6.78□□□□□ -1.32
SMARCB1-206ENST00000477836 RHEBQ15382 184 aa6.78□□□□□ -1.32
SMARCB1-206ENST00000477836 FOXI2Q6ZQN5 318 aa6.78□□□□□ -1.32
SMARCB1-206ENST00000477836 LINC01551Q86U37 167 aa6.78□□□□□ -1.32
SMARCB1-206ENST00000477836 BAGE2Q86Y30 109 aa6.78□□□□□ -1.32
SMARCB1-206ENST00000477836 NHLRC2Q8NBF2 726 aa6.78□□□□□ -1.32
SMARCB1-206ENST00000477836 CLRN3Q8NCR9 226 aa6.78□□□□□ -1.32
SMARCB1-206ENST00000477836 VGLL1Q99990 258 aa6.78□□□□□ -1.32
SMARCB1-206ENST00000477836 C1QTNF4Q9BXJ3 329 aa6.78□□□□□ -1.32
SMARCB1-206ENST00000477836 KRTAP1-5Q9BYS1 174 aa6.78□□□□□ -1.32
SMARCB1-206ENST00000477836 ZFP30Q9Y2G7 519 aa6.78□□□□□ -1.32
SMARCB1-206ENST00000477836 LINC00588Q9Y4M8 146 aa6.78□□□□□ -1.32
SMARCB1-206ENST00000477836 TEX48A0A1B0GUV7 120 aa6.77□□□□□ -1.33
SMARCB1-206ENST00000477836 DUSP14O95147 198 aaKnown RBP6.77□□□□□ -1.33
SMARCB1-206ENST00000477836 NUDT3O95989 172 aa6.77□□□□□ -1.33
SMARCB1-206ENST00000477836 ZNF705DP0CH99 300 aaPredicted RBP6.77□□□□□ -1.33
SMARCB1-206ENST00000477836 ZNF705BP0CI00 300 aaPredicted RBP6.77□□□□□ -1.33
SMARCB1-206ENST00000477836 CT45A10P0DMU9 189 aa6.77□□□□□ -1.33
SMARCB1-206ENST00000477836 ZNF138P52744 262 aa6.77□□□□□ -1.33
SMARCB1-206ENST00000477836 DEFB1P60022 68 aa6.77□□□□□ -1.33
SMARCB1-206ENST00000477836 KRTAP10-1P60331 282 aa6.77□□□□□ -1.33
SMARCB1-206ENST00000477836 SAPCD1Q5SSQ6 148 aa6.77□□□□□ -1.33
SMARCB1-206ENST00000477836 C9orf47Q6ZRZ4 202 aa6.77□□□□□ -1.33
SMARCB1-206ENST00000477836 TMEM183AQ8IXX5 376 aa6.77□□□□□ -1.33
SMARCB1-206ENST00000477836 SAV1Q9H4B6 383 aaPredicted RBP6.77□□□□□ -1.33
SMARCB1-206ENST00000477836 Q9H8V8 135 aa6.77□□□□□ -1.33
SMARCB1-206ENST00000477836 SDF2L1Q9HCN8 221 aa6.77□□□□□ -1.33
SMARCB1-206ENST00000477836 BIN3Q9NQY0 253 aa6.77□□□□□ -1.33
SMARCB1-206ENST00000477836 IGHV3OR16-12A0A075B7B8 117 aa6.76□□□□□ -1.33
SMARCB1-206ENST00000477836 A0A0J9YX75 114 aa6.76□□□□□ -1.33
SMARCB1-206ENST00000477836 B4DEV8 164 aa6.76□□□□□ -1.33
SMARCB1-206ENST00000477836 IGLV2-8P01709 118 aa6.76□□□□□ -1.33
SMARCB1-206ENST00000477836 HLA-DRB4P13762 266 aa6.76□□□□□ -1.33
SMARCB1-206ENST00000477836 NUTF2P61970 127 aaKnown RBP6.76□□□□□ -1.33
SMARCB1-206ENST00000477836 TTC32Q5I0X7 151 aa6.76□□□□□ -1.33
SMARCB1-206ENST00000477836 PRR27Q6MZM9 219 aa6.76□□□□□ -1.33
SMARCB1-206ENST00000477836 ZNF705AQ6ZN79 300 aaPredicted RBP6.76□□□□□ -1.33
SMARCB1-206ENST00000477836 OCC1Q8TAD7 63 aa6.76□□□□□ -1.33
SMARCB1-206ENST00000477836 ISOC2Q96AB3 205 aa6.76□□□□□ -1.33
SMARCB1-206ENST00000477836 LINC00477Q96M19 166 aa6.76□□□□□ -1.33
SMARCB1-206ENST00000477836 NEU1Q99519 415 aa6.76□□□□□ -1.33
SMARCB1-206ENST00000477836 AGPAT4-IT1Q9H0P7 198 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms