RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 OR4X2Q8NGF9 303 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 C10orf105Q8TEF2 133 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 C10orf82Q8WW14 230 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 PSMF1Q92530 271 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 HIST1H2BHQ93079 126 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 TSLPQ969D9 159 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 HYLS1Q96M11 299 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 DSCR8Q96T75 97 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 S100A13Q99584 98 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 HIST1H2BNQ99877 126 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 HIST1H2BMQ99879 126 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 HIST1H2BLQ99880 126 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 AGPAT4-IT1Q9H0P7 198 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 SMCO4Q9NRQ5 59 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 IL36BQ9NZH7 164 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 EPDR1Q9UM22 224 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 HHLA3Q9XRX5 114 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 NOP16Q9Y3C1 178 aaKnown RBP0.98□□□□□ -2.25
VPS50-213ENST00000477572 DNAJC15Q9Y5T4 150 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 HLA-DRB4X5D2U9 266 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 DLC1Q96QB1 1528 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 MYOFQ9NZM1 2061 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 KDM3BQ7LBC6 1761 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 ARFGEF2Q9Y6D5 1785 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 COL1A1P02452 1464 aaPredicted RBP0.98□□□□□ -2.25
VPS50-213ENST00000477572 CFTRP13569 1480 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 FYCO1Q9BQS8 1478 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 MARF1Q9Y4F3 1742 aaKnown RBP0.98□□□□□ -2.25
VPS50-213ENST00000477572 RTEL1-TNFRSF6BF6WH68 1400 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 CASP8AP2Q9UKL3 1982 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 TOPAZ1Q8N9V7 1692 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 DIDO1Q9BTC0 2240 aaKnown RBP0.97□□□□□ -2.25
VPS50-213ENST00000477572 PTPRSQ13332 1948 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 RAPGEF6Q8TEU7 1601 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 PLXNA2O75051 1894 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 BTAF1O14981 1849 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 MUC21A0A140T8X8 626 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 IGLC7A0M8Q6 106 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 IGKV2-29A2NJV5 120 aaPredicted RBP0.97□□□□□ -2.25
VPS50-213ENST00000477572 RBAKDNA6NC62 111 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 MCRIP1C9JLW8 97 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 H3BT86 120 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 APOC4-APOC2K7ER74 178 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 M0R2P5 195 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 NDUFB3O43676 98 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 LY6HO94772 140 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 NDUFB6O95139 128 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 SFT2D2O95562 160 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 CYB5AP00167 134 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 CFDP00746 253 aaPredicted RBP0.97□□□□□ -2.25
VPS50-213ENST00000477572 TRACP01848 142 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 HBDP02042 147 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 APOC2P02655 101 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 PRM2P04554 102 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 CRYGAP11844 174 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 SLC25A6P12236 298 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 CSN1S1P47710 185 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 HINT1P49773 126 aaPredicted RBP0.97□□□□□ -2.25
VPS50-213ENST00000477572 TAS2R45P59539 299 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 YPEL3P61236 119 aaPredicted RBP0.97□□□□□ -2.25
VPS50-213ENST00000477572 FGF12P61328 243 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 EIF5AP63241 154 aaKnown RBP0.97□□□□□ -2.25
VPS50-213ENST00000477572 CCL20P78556 96 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 MRPL51Q4U2R6 128 aaKnown RBP0.97□□□□□ -2.25
VPS50-213ENST00000477572 MIC13Q5XKP0 118 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 SOSTDC1Q6X4U4 206 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 Q6ZS92 163 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 C7orf65Q6ZTY9 151 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 FP248Q71RG6 208 aaPredicted RBP0.97□□□□□ -2.25
VPS50-213ENST00000477572 PHF5AQ7RTV0 110 aaKnown RBP0.97□□□□□ -2.25
VPS50-213ENST00000477572 SPATA12Q7Z6I5 190 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 Q8N2B8 174 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 C10orf111Q8N326 155 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 OR5D16Q8NGK9 328 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 CLDND2Q8NHS1 167 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 PRELID3AQ96N28 172 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 C20orf78Q9BR46 151 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 TTTY13Q9BZ97 58 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 NAA60Q9H7X0 242 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 BCL2L10Q9HD36 194 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 TXNL4BQ9NX01 149 aaKnown RBP0.97□□□□□ -2.25
VPS50-213ENST00000477572 UQCR10Q9UDW1 63 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 TPRKBQ9Y3C4 175 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 SERP1Q9Y6X1 66 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 UGGT2Q9NYU1 1516 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 SCN3AQ9NY46 2000 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 EML5Q05BV3 1969 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 ITSN1Q15811 1721 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 UBR1Q8IWV7 1749 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 ARHGEF28Q8N1W1 1705 aaKnown RBP0.97□□□□□ -2.25
VPS50-213ENST00000477572 WDR90Q96KV7 1748 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 FANCD2Q9BXW9 1451 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 ITSN2Q9NZM3 1697 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 ABCC5O15440 1437 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 CASKIN1Q8WXD9 1431 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 TRPM1Q7Z4N2 1603 aa0.97□□□□□ -2.25
VPS50-213ENST00000477572 ABCA8O94911 1581 aa0.96□□□□□ -2.26
VPS50-213ENST00000477572 MED1Q15648 1581 aaPredicted RBP0.96□□□□□ -2.26
VPS50-213ENST00000477572 LAMC3Q9Y6N6 1575 aa0.96□□□□□ -2.26
VPS50-213ENST00000477572 INTS1Q8N201 2190 aaKnown RBP0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms