RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 TEX29Q8N6K0 151 aa10.4□□□□□ -0.74
DFFB-209ENST00000477548 UBTD1Q9HAC8 227 aa10.4□□□□□ -0.74
DFFB-209ENST00000477548 MALRD1Q5VYJ5 2156 aa10.4□□□□□ -0.74
DFFB-209ENST00000477548 LRBAP50851 2863 aa10.4□□□□□ -0.74
DFFB-209ENST00000477548 SRSF2Q01130 221 aaKnown RBP10.4□□□□□ -0.75
DFFB-209ENST00000477548 ERCC8Q13216 396 aa10.4□□□□□ -0.75
DFFB-209ENST00000477548 GFRALQ6UXV0 394 aa10.4□□□□□ -0.75
DFFB-209ENST00000477548 LINC01548A6NM66 108 aa10.39□□□□□ -0.75
DFFB-209ENST00000477548 ZNF815PA8K554 130 aa10.39□□□□□ -0.75
DFFB-209ENST00000477548 POLEQ07864 2286 aa10.39□□□□□ -0.75
DFFB-209ENST00000477548 PKDREJQ9NTG1 2253 aa10.39□□□□□ -0.75
DFFB-209ENST00000477548 C3orf36Q3SXR2 165 aa10.39□□□□□ -0.75
DFFB-209ENST00000477548 C22orf34Q6ZV56 151 aa10.39□□□□□ -0.75
DFFB-209ENST00000477548 VKORC1Q9BQB6 163 aa10.39□□□□□ -0.75
DFFB-209ENST00000477548 A8MWV9 139 aa10.38□□□□□ -0.75
DFFB-209ENST00000477548 ZNF688P0C7X2 276 aa10.38□□□□□ -0.75
DFFB-209ENST00000477548 NRACQ8N912 160 aa10.38□□□□□ -0.75
DFFB-209ENST00000477548 SCGB3A1Q96QR1 104 aa10.38□□□□□ -0.75
DFFB-209ENST00000477548 PRADC1Q9BSG0 188 aa10.38□□□□□ -0.75
DFFB-209ENST00000477548 SPTBN4Q9H254 2564 aa10.38□□□□□ -0.75
DFFB-209ENST00000477548 TRAV12-1A0A0B4J245 112 aa10.38□□□□□ -0.75
DFFB-209ENST00000477548 TRAV17A0A0B4J275 112 aa10.38□□□□□ -0.75
DFFB-209ENST00000477548 MBD3L4A6NDZ8 208 aaPredicted RBP10.38□□□□□ -0.75
DFFB-209ENST00000477548 MBD3L3A6NE82 208 aaPredicted RBP10.38□□□□□ -0.75
DFFB-209ENST00000477548 MBD3L5A6NJ08 208 aaPredicted RBP10.38□□□□□ -0.75
DFFB-209ENST00000477548 COX7A1P24310 79 aa10.38□□□□□ -0.75
DFFB-209ENST00000477548 IGFL2Q6UWQ7 119 aa10.38□□□□□ -0.75
DFFB-209ENST00000477548 ASCL5Q7RTU5 278 aa10.38□□□□□ -0.75
DFFB-209ENST00000477548 MBD3L2Q8NHZ7 208 aaPredicted RBP10.38□□□□□ -0.75
DFFB-209ENST00000477548 CFHR4Q92496 578 aa10.38□□□□□ -0.75
DFFB-209ENST00000477548 SMIM9A6NGZ8 99 aa10.37□□□□□ -0.75
DFFB-209ENST00000477548 F8WDY8 70 aa10.37□□□□□ -0.75
DFFB-209ENST00000477548 ATRXP46100 2492 aa10.37□□□□□ -0.75
DFFB-209ENST00000477548 FAM27E3Q08E93 113 aa10.37□□□□□ -0.75
DFFB-209ENST00000477548 KIR2DL4Q99706 377 aa10.37□□□□□ -0.75
DFFB-209ENST00000477548 DCHS2Q6V1P9 2916 aa10.37□□□□□ -0.75
DFFB-209ENST00000477548 BUB1B-PAK6H3BSN5 160 aa10.37□□□□□ -0.75
DFFB-209ENST00000477548 DYNAPQ8N1N2 210 aa10.37□□□□□ -0.75
DFFB-209ENST00000477548 CSMD1Q96PZ7 3565 aa10.37□□□□□ -0.75
DFFB-209ENST00000477548 FAM90A27PA6NNH2 459 aa10.37□□□□□ -0.75
DFFB-209ENST00000477548 UBE2D1P51668 147 aa10.37□□□□□ -0.75
DFFB-209ENST00000477548 UBE2D3P61077 147 aa10.37□□□□□ -0.75
DFFB-209ENST00000477548 UBE2D2P62837 147 aa10.37□□□□□ -0.75
DFFB-209ENST00000477548 MRPL23Q16540 153 aaKnown RBP10.37□□□□□ -0.75
DFFB-209ENST00000477548 NRGNQ92686 78 aa10.37□□□□□ -0.75
DFFB-209ENST00000477548 DUX5Q96PT3 197 aa10.37□□□□□ -0.75
DFFB-209ENST00000477548 TCL1BO95988 128 aa10.36□□□□□ -0.75
DFFB-209ENST00000477548 IGHV3-23P01764 117 aa10.36□□□□□ -0.75
DFFB-209ENST00000477548 IL17RELQ6ZVW7 336 aa10.36□□□□□ -0.75
DFFB-209ENST00000477548 PLEKHB2Q96CS7 222 aa10.36□□□□□ -0.75
DFFB-209ENST00000477548 COL12A1Q99715 3063 aa10.36□□□□□ -0.75
DFFB-209ENST00000477548 TMEM262E9PQX1 116 aa10.36□□□□□ -0.75
DFFB-209ENST00000477548 IGLV1-47P01700 117 aa10.36□□□□□ -0.75
DFFB-209ENST00000477548 IGHG4P01861 327 aa10.36□□□□□ -0.75
DFFB-209ENST00000477548 ASH1LQ9NR48 2969 aaKnown RBP10.35□□□□□ -0.75
DFFB-209ENST00000477548 IGHV3OR16-8A0A075B7F1 116 aa10.35□□□□□ -0.75
DFFB-209ENST00000477548 CCDC179H3BU77 68 aa10.35□□□□□ -0.75
DFFB-209ENST00000477548 SCGB1C2P0DMR2 95 aa10.35□□□□□ -0.75
DFFB-209ENST00000477548 SLC25A16P16260 332 aa10.35□□□□□ -0.75
DFFB-209ENST00000477548 SPANXN1Q5VSR9 72 aa10.35□□□□□ -0.75
DFFB-209ENST00000477548 ANKRD29Q8N6D5 301 aa10.35□□□□□ -0.75
DFFB-209ENST00000477548 OR11H6Q8NGC7 330 aa10.35□□□□□ -0.75
DFFB-209ENST00000477548 SMAD5-AS1Q9Y6J3 95 aa10.35□□□□□ -0.75
DFFB-209ENST00000477548 IGKV3D-20A0A0C4DH25 116 aa10.35□□□□□ -0.75
DFFB-209ENST00000477548 PSMG3-AS1Q96PY0 264 aa10.35□□□□□ -0.75
DFFB-209ENST00000477548 PRAC2D3DTV9 90 aa10.34□□□□□ -0.75
DFFB-209ENST00000477548 NUP37Q8NFH4 326 aa10.34□□□□□ -0.75
DFFB-209ENST00000477548 SMIM2Q9BVW6 85 aa10.34□□□□□ -0.75
DFFB-209ENST00000477548 TRBV20-1A0A075B6N2 111 aa10.34□□□□□ -0.75
DFFB-209ENST00000477548 ORMDL2Q53FV1 153 aa10.34□□□□□ -0.75
DFFB-209ENST00000477548 NDUFA11Q86Y39 141 aa10.34□□□□□ -0.75
DFFB-209ENST00000477548 NEXN-AS1Q8NBZ9 246 aa10.34□□□□□ -0.75
DFFB-209ENST00000477548 C21orf62Q9NYP8 219 aa10.34□□□□□ -0.75
DFFB-209ENST00000477548 PTPRQQ9UMZ3 2332 aa10.33□□□□□ -0.76
DFFB-209ENST00000477548 GAGE12JA6NER3 117 aa10.33□□□□□ -0.76
DFFB-209ENST00000477548 GAGE7O76087 117 aa10.33□□□□□ -0.76
DFFB-209ENST00000477548 GAGE12FP0CL80 117 aa10.33□□□□□ -0.76
DFFB-209ENST00000477548 GAGE12GP0CL81 117 aa10.33□□□□□ -0.76
DFFB-209ENST00000477548 GAGE12IP0CL82 117 aa10.33□□□□□ -0.76
DFFB-209ENST00000477548 GAGE4Q13068 117 aa10.33□□□□□ -0.76
DFFB-209ENST00000477548 RNF182Q8N6D2 247 aa10.33□□□□□ -0.76
DFFB-209ENST00000477548 KLHL30-AS1Q8NEE0 82 aa10.33□□□□□ -0.76
DFFB-209ENST00000477548 C11orf21Q9P2W6 132 aa10.33□□□□□ -0.76
DFFB-209ENST00000477548 CHD8Q9HCK8 2581 aa10.33□□□□□ -0.76
DFFB-209ENST00000477548 IGHV3-35A0A0C4DH35 117 aa10.33□□□□□ -0.76
DFFB-209ENST00000477548 CD7P09564 240 aa10.33□□□□□ -0.76
DFFB-209ENST00000477548 FAM215AQ9Y5M1 114 aa10.33□□□□□ -0.76
DFFB-209ENST00000477548 TIMM23O14925 209 aa10.32□□□□□ -0.76
DFFB-209ENST00000477548 NHLRC4P0CG21 123 aaPredicted RBP10.32□□□□□ -0.76
DFFB-209ENST00000477548 TPRP12270 2363 aaKnown RBP10.32□□□□□ -0.76
DFFB-209ENST00000477548 GAGE2BQ13066 116 aa10.32□□□□□ -0.76
DFFB-209ENST00000477548 ZNF672Q499Z4 452 aaPredicted RBP10.32□□□□□ -0.76
DFFB-209ENST00000477548 GAGE2EQ4V326 116 aa10.32□□□□□ -0.76
DFFB-209ENST00000477548 TOMM6Q96B49 74 aa10.32□□□□□ -0.76
DFFB-209ENST00000477548 FANCD2OSQ96PS1 177 aa10.32□□□□□ -0.76
DFFB-209ENST00000477548 RNF5Q99942 180 aa10.32□□□□□ -0.76
DFFB-209ENST00000477548 GAGE2DQ9UEU5 116 aa10.32□□□□□ -0.76
DFFB-209ENST00000477548 TRAV8-2A0A0B4J237 113 aa10.31□□□□□ -0.76
DFFB-209ENST00000477548 NBR2O15453 112 aa10.31□□□□□ -0.76
DFFB-209ENST00000477548 BAALCQ8WXS3 180 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms