RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 KCNS1Q96KK3 526 aa11.7□□□□□ -0.54
VHL-203ENST00000477538 MUC4Q99102 2169 aa11.69□□□□□ -0.54
VHL-203ENST00000477538 CBY3A6NI87 242 aa11.69□□□□□ -0.54
VHL-203ENST00000477538 B4DEV8 164 aa11.69□□□□□ -0.54
VHL-203ENST00000477538 M0R036 132 aa11.69□□□□□ -0.54
VHL-203ENST00000477538 TDRG1Q3Y452 100 aa11.69□□□□□ -0.54
VHL-203ENST00000477538 LINC01559Q495D7 138 aa11.69□□□□□ -0.54
VHL-203ENST00000477538 RNASE7Q9H1E1 156 aaKnown RBP11.69□□□□□ -0.54
VHL-203ENST00000477538 FBN3Q75N90 2809 aa11.68□□□□□ -0.54
VHL-203ENST00000477538 IGKV3D-20A0A0C4DH25 116 aa11.68□□□□□ -0.54
VHL-203ENST00000477538 P01737 135 aa11.68□□□□□ -0.54
VHL-203ENST00000477538 NHLRC4P0CG21 123 aaPredicted RBP11.68□□□□□ -0.54
VHL-203ENST00000477538 MIFP14174 115 aa11.68□□□□□ -0.54
VHL-203ENST00000477538 AZU1P20160 251 aa11.68□□□□□ -0.54
VHL-203ENST00000477538 PNRC1Q12796 327 aaPredicted RBP11.68□□□□□ -0.54
VHL-203ENST00000477538 IBA57Q5T440 356 aaKnown RBP11.68□□□□□ -0.54
VHL-203ENST00000477538 NUDT10Q8NFP7 164 aa11.68□□□□□ -0.54
VHL-203ENST00000477538 ISOC2Q96AB3 205 aa11.68□□□□□ -0.54
VHL-203ENST00000477538 NUDT11Q96G61 164 aa11.68□□□□□ -0.54
VHL-203ENST00000477538 TP53TG3Q9ULZ0 132 aa11.68□□□□□ -0.54
VHL-203ENST00000477538 TRGV11A0A075B6L2 103 aa11.67□□□□□ -0.54
VHL-203ENST00000477538 TMSB15BA0A087X1C1 80 aa11.67□□□□□ -0.54
VHL-203ENST00000477538 TMEM189A5PLL7 270 aa11.67□□□□□ -0.54
VHL-203ENST00000477538 KRBOX1C9JBD0 128 aa11.67□□□□□ -0.54
VHL-203ENST00000477538 TYMSP04818 313 aa11.67□□□□□ -0.54
VHL-203ENST00000477538 ERVFC1-1P60608 527 aa11.67□□□□□ -0.54
VHL-203ENST00000477538 RPL19P84098 196 aaKnown RBP11.67□□□□□ -0.54
VHL-203ENST00000477538 C10orf91Q5T1B1 145 aa11.67□□□□□ -0.54
VHL-203ENST00000477538 FAM231DQ6ZW35 169 aa11.67□□□□□ -0.54
VHL-203ENST00000477538 Q8NAQ8 132 aa11.67□□□□□ -0.54
VHL-203ENST00000477538 TMEM263Q8WUH6 116 aaKnown RBP11.67□□□□□ -0.54
VHL-203ENST00000477538 C16orf74Q96GX8 76 aa11.67□□□□□ -0.54
VHL-203ENST00000477538 IGHV4-28A0A0C4DH34 117 aa11.66□□□□□ -0.54
VHL-203ENST00000477538 GNRH2O43555 120 aa11.66□□□□□ -0.54
VHL-203ENST00000477538 ZNF493Q6ZR52 646 aa11.66□□□□□ -0.54
VHL-203ENST00000477538 OR2D3Q8NGH3 330 aa11.66□□□□□ -0.54
VHL-203ENST00000477538 RNASE8Q8TDE3 154 aaKnown RBP11.66□□□□□ -0.54
VHL-203ENST00000477538 CARHSP1Q9Y2V2 147 aaKnown RBP11.66□□□□□ -0.54
VHL-203ENST00000477538 COL7A1Q02388 2944 aa11.66□□□□□ -0.54
VHL-203ENST00000477538 GATCO43716 136 aaKnown RBP11.65□□□□□ -0.54
VHL-203ENST00000477538 C15orf54Q8N8G6 183 aa11.65□□□□□ -0.54
VHL-203ENST00000477538 SFRP2Q96HF1 295 aa11.65□□□□□ -0.54
VHL-203ENST00000477538 RPP21Q9H633 154 aaKnown RBP11.65□□□□□ -0.54
VHL-203ENST00000477538 OSTCQ9NRP0 149 aa11.65□□□□□ -0.54
VHL-203ENST00000477538 NACAE9PAV3 2078 aa11.64□□□□□ -0.55
VHL-203ENST00000477538 IGHV3-16A0A0C4DH30 117 aa11.64□□□□□ -0.55
VHL-203ENST00000477538 GRIFINA4D1Z8 144 aa11.64□□□□□ -0.55
VHL-203ENST00000477538 DEFB4AO15263 64 aa11.64□□□□□ -0.55
VHL-203ENST00000477538 ASIPP42127 132 aa11.64□□□□□ -0.55
VHL-203ENST00000477538 RPS20P60866 119 aaKnown RBP11.64□□□□□ -0.55
VHL-203ENST00000477538 ZNF415Q09FC8 603 aa11.64□□□□□ -0.55
VHL-203ENST00000477538 C11orf72Q8NBR9 251 aa11.64□□□□□ -0.55
VHL-203ENST00000477538 OR10G8Q8NGN5 311 aa11.64□□□□□ -0.55
VHL-203ENST00000477538 GSN-AS1Q9NRJ2 163 aa11.64□□□□□ -0.55
VHL-203ENST00000477538 MDFICQ9P1T7 246 aa11.64□□□□□ -0.55
VHL-203ENST00000477538 PRKDCP78527 4128 aaKnown RBP11.64□□□□□ -0.55
VHL-203ENST00000477538 PLAC8L1A1L4L8 177 aa11.63□□□□□ -0.55
VHL-203ENST00000477538 XKRY2A2RUG3 117 aa11.63□□□□□ -0.55
VHL-203ENST00000477538 SNURFLB1AK76 121 aa11.63□□□□□ -0.55
VHL-203ENST00000477538 CXCL1P09341 107 aa11.63□□□□□ -0.55
VHL-203ENST00000477538 S100A4P26447 101 aaKnown RBP11.63□□□□□ -0.55
VHL-203ENST00000477538 ZNF575Q86XF7 245 aa11.63□□□□□ -0.55
VHL-203ENST00000477538 GZMBP10144 247 aa11.62□□□□□ -0.55
VHL-203ENST00000477538 EMP1P54849 157 aa11.62□□□□□ -0.55
VHL-203ENST00000477538 TCL1AP56279 114 aa11.62□□□□□ -0.55
VHL-203ENST00000477538 DNLZQ5SXM8 178 aa11.62□□□□□ -0.55
VHL-203ENST00000477538 C11orf68Q9H3H3 251 aaKnown RBP11.62□□□□□ -0.55
VHL-203ENST00000477538 A0A0J9YWU9 116 aa11.61□□□□□ -0.55
VHL-203ENST00000477538 H3BVH4 76 aa11.61□□□□□ -0.55
VHL-203ENST00000477538 APOC3P02656 99 aa11.61□□□□□ -0.55
VHL-203ENST00000477538 RNASE3P12724 160 aaKnown RBP11.61□□□□□ -0.55
VHL-203ENST00000477538 RNF212Q495C1 297 aa11.61□□□□□ -0.55
VHL-203ENST00000477538 CT83Q5H943 113 aa11.61□□□□□ -0.55
VHL-203ENST00000477538 IL17DQ8TAD2 202 aa11.61□□□□□ -0.55
VHL-203ENST00000477538 TIMM8BQ9Y5J9 83 aaPredicted RBP11.61□□□□□ -0.55
VHL-203ENST00000477538 V9GYV3 84 aa11.61□□□□□ -0.55
VHL-203ENST00000477538 DNAH9Q9NYC9 4486 aa11.6□□□□□ -0.55
VHL-203ENST00000477538 A8MWL6 223 aa11.6□□□□□ -0.55
VHL-203ENST00000477538 MT-ND4LP03901 98 aa11.6□□□□□ -0.55
VHL-203ENST00000477538 C9orf85Q96MD7 179 aa11.6□□□□□ -0.55
VHL-203ENST00000477538 NOP10Q9NPE3 64 aaKnown RBP11.6□□□□□ -0.55
VHL-203ENST00000477538 IL36BQ9NZH7 164 aa11.6□□□□□ -0.55
VHL-203ENST00000477538 U3KQK5 164 aa11.6□□□□□ -0.55
VHL-203ENST00000477538 PPP1R2P9O14990 202 aa11.59□□□□□ -0.55
VHL-203ENST00000477538 ARMS2P0C7Q2 107 aa11.59□□□□□ -0.55
VHL-203ENST00000477538 DAZ2Q13117 558 aaKnown RBP11.59□□□□□ -0.55
VHL-203ENST00000477538 SVBPQ8N300 66 aa11.59□□□□□ -0.55
VHL-203ENST00000477538 CLRN3Q8NCR9 226 aa11.59□□□□□ -0.55
VHL-203ENST00000477538 ANAPC16Q96DE5 110 aa11.59□□□□□ -0.55
VHL-203ENST00000477538 SPXQ9BT56 116 aa11.59□□□□□ -0.55
VHL-203ENST00000477538 IGLC6P0CF74 106 aa11.58□□□□□ -0.56
VHL-203ENST00000477538 MED14OSP0DP75 135 aa11.58□□□□□ -0.56
VHL-203ENST00000477538 FAM222AQ5U5X8 452 aa11.58□□□□□ -0.56
VHL-203ENST00000477538 FER1L6-AS1Q8NA97 138 aa11.58□□□□□ -0.56
VHL-203ENST00000477538 TSKUQ8WUA8 353 aa11.58□□□□□ -0.56
VHL-203ENST00000477538 LYRM9A8MSI8 78 aa11.57□□□□□ -0.56
VHL-203ENST00000477538 RHEBQ15382 184 aa11.57□□□□□ -0.56
VHL-203ENST00000477538 TPPP3Q9BW30 176 aa11.57□□□□□ -0.56
VHL-203ENST00000477538 SCRT2Q9NQ03 307 aa11.57□□□□□ -0.56
VHL-203ENST00000477538 DKK2Q9UBU2 259 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms