RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 LGALS9BQ3B8N2 356 aa14.65□□□□□ -0.06
VARS2-209ENST00000477288 LGALS9CQ6DKI2 356 aa14.65□□□□□ -0.06
VARS2-209ENST00000477288 F8W1H4 67 aa14.65□□□□□ -0.06
VARS2-209ENST00000477288 PHF3Q92576 2039 aaKnown RBP14.65□□□□□ -0.06
VARS2-209ENST00000477288 F8VRH5 84 aa14.65□□□□□ -0.06
VARS2-209ENST00000477288 SPRY2O43597 315 aa14.65□□□□□ -0.06
VARS2-209ENST00000477288 RBM3P98179 157 aaKnown RBP14.65□□□□□ -0.06
VARS2-209ENST00000477288 ZNF726P1Q15940 193 aa14.65□□□□□ -0.06
VARS2-209ENST00000477288 PIFOQ8TCI5 191 aa14.65□□□□□ -0.06
VARS2-209ENST00000477288 A8MWP6 167 aa14.65□□□□□ -0.06
VARS2-209ENST00000477288 IGHV3-30P01768 117 aa14.65□□□□□ -0.06
VARS2-209ENST00000477288 IGHV3-33P01772 117 aa14.65□□□□□ -0.06
VARS2-209ENST00000477288 IGHV3-30-3P0DP02 117 aa14.65□□□□□ -0.06
VARS2-209ENST00000477288 IGHV3-30-5P0DP03 117 aa14.65□□□□□ -0.06
VARS2-209ENST00000477288 C5orf38Q86SI9 138 aa14.65□□□□□ -0.06
VARS2-209ENST00000477288 CREBBPQ92793 2442 aa14.64□□□□□ -0.07
VARS2-209ENST00000477288 H3BUA1 57 aa14.64□□□□□ -0.07
VARS2-209ENST00000477288 COX8AP10176 69 aa14.64□□□□□ -0.07
VARS2-209ENST00000477288 IGFBPL1Q8WX77 278 aa14.64□□□□□ -0.07
VARS2-209ENST00000477288 ZNF503Q96F45 646 aa14.64□□□□□ -0.07
VARS2-209ENST00000477288 WISP1O95388 367 aa14.64□□□□□ -0.07
VARS2-209ENST00000477288 TIRAPP58753 221 aa14.64□□□□□ -0.07
VARS2-209ENST00000477288 SLURP1P55000 103 aa14.64□□□□□ -0.07
VARS2-209ENST00000477288 C17orf77Q96MU5 243 aa14.64□□□□□ -0.07
VARS2-209ENST00000477288 ANKRD29Q8N6D5 301 aa14.64□□□□□ -0.07
VARS2-209ENST00000477288 Q9H8V8 135 aa14.64□□□□□ -0.07
VARS2-209ENST00000477288 PCNX1Q96RV3 2341 aa14.64□□□□□ -0.07
VARS2-209ENST00000477288 IGLV10-54A0A075B6I4 117 aa14.63□□□□□ -0.07
VARS2-209ENST00000477288 ETV2O00321 342 aaPredicted RBP14.63□□□□□ -0.07
VARS2-209ENST00000477288 DKK2Q9UBU2 259 aa14.63□□□□□ -0.07
VARS2-209ENST00000477288 USF3Q68DE3 2245 aa14.63□□□□□ -0.07
VARS2-209ENST00000477288 IGLC1P0CG04 106 aa14.63□□□□□ -0.07
VARS2-209ENST00000477288 CADP27708 2225 aa14.63□□□□□ -0.07
VARS2-209ENST00000477288 FOXE3Q13461 319 aa14.63□□□□□ -0.07
VARS2-209ENST00000477288 Q6ZWC4 215 aa14.63□□□□□ -0.07
VARS2-209ENST00000477288 H3BMG7 143 aa14.63□□□□□ -0.07
VARS2-209ENST00000477288 K7EP34 96 aa14.63□□□□□ -0.07
VARS2-209ENST00000477288 GP9P14770 177 aa14.63□□□□□ -0.07
VARS2-209ENST00000477288 KIAA2026Q5HYC2 2103 aa14.63□□□□□ -0.07
VARS2-209ENST00000477288 CFPP27918 469 aa14.62□□□□□ -0.07
VARS2-209ENST00000477288 ORMDL1Q9P0S3 153 aa14.62□□□□□ -0.07
VARS2-209ENST00000477288 TRAV4A0A0B4J268 109 aa14.62□□□□□ -0.07
VARS2-209ENST00000477288 BVES-AS1Q5T3Y7 98 aa14.62□□□□□ -0.07
VARS2-209ENST00000477288 C20orf144Q9BQM9 153 aa14.62□□□□□ -0.07
VARS2-209ENST00000477288 IGLL1P15814 213 aa14.62□□□□□ -0.07
VARS2-209ENST00000477288 FXYD5Q96DB9 178 aa14.62□□□□□ -0.07
VARS2-209ENST00000477288 CAMK2N2Q96S95 79 aa14.62□□□□□ -0.07
VARS2-209ENST00000477288 DYNAPQ8N1N2 210 aa14.61□□□□□ -0.07
VARS2-209ENST00000477288 C20orf78Q9BR46 151 aa14.61□□□□□ -0.07
VARS2-209ENST00000477288 PYGO2Q9BRQ0 406 aa14.61□□□□□ -0.07
VARS2-209ENST00000477288 PTPRDP23468 1912 aa14.61□□□□□ -0.07
VARS2-209ENST00000477288 A0A1W2PPM0 123 aa14.61□□□□□ -0.07
VARS2-209ENST00000477288 SLC25A29Q8N8R3 303 aa14.61□□□□□ -0.07
VARS2-209ENST00000477288 BAALC-AS2P0C853 105 aa14.6□□□□□ -0.07
VARS2-209ENST00000477288 PIP4P1Q86T03 277 aa14.6□□□□□ -0.07
VARS2-209ENST00000477288 ESM1Q9NQ30 184 aa14.6□□□□□ -0.07
VARS2-209ENST00000477288 IGHV2-70P01814 119 aa14.6□□□□□ -0.07
VARS2-209ENST00000477288 BDP1A6H8Y1 2624 aa14.6□□□□□ -0.07
VARS2-209ENST00000477288 SRSF2Q01130 221 aaKnown RBP14.6□□□□□ -0.07
VARS2-209ENST00000477288 FAM231DQ6ZW35 169 aa14.6□□□□□ -0.07
VARS2-209ENST00000477288 IGHV4-38-2P0DP08 117 aa14.6□□□□□ -0.07
VARS2-209ENST00000477288 IGHV4-30-2A0A087WSY4 118 aa14.59□□□□□ -0.07
VARS2-209ENST00000477288 IGHV4-61A0A0C4DH41 118 aa14.59□□□□□ -0.07
VARS2-209ENST00000477288 K7EM74 188 aa14.59□□□□□ -0.07
VARS2-209ENST00000477288 CCL18P55774 89 aa14.59□□□□□ -0.07
VARS2-209ENST00000477288 AMTNQ6UX39 209 aa14.59□□□□□ -0.07
VARS2-209ENST00000477288 NTN5Q8WTR8 489 aaPredicted RBP14.59□□□□□ -0.07
VARS2-209ENST00000477288 GYPEP15421 78 aa14.59□□□□□ -0.07
VARS2-209ENST00000477288 K7EP13 123 aa14.59□□□□□ -0.07
VARS2-209ENST00000477288 NLRC5Q86WI3 1866 aa14.59□□□□□ -0.07
VARS2-209ENST00000477288 DOCK7Q96N67 2140 aa14.59□□□□□ -0.07
VARS2-209ENST00000477288 TSC2P49815 1807 aa14.59□□□□□ -0.07
VARS2-209ENST00000477288 KAAG1Q9UBP8 84 aa14.58□□□□□ -0.07
VARS2-209ENST00000477288 ZNF491Q8N8L2 437 aa14.58□□□□□ -0.08
VARS2-209ENST00000477288 SPANXA1Q9NS26 97 aa14.58□□□□□ -0.08
VARS2-209ENST00000477288 DOCK10Q96BY6 2186 aa14.58□□□□□ -0.08
VARS2-209ENST00000477288 TICRRQ7Z2Z1 1910 aa14.58□□□□□ -0.08
VARS2-209ENST00000477288 CTSZQ9UBR2 303 aa14.58□□□□□ -0.08
VARS2-209ENST00000477288 ICOSQ9Y6W8 199 aa14.58□□□□□ -0.08
VARS2-209ENST00000477288 TMEM258P61165 79 aa14.57□□□□□ -0.08
VARS2-209ENST00000477288 FUSP35637 526 aaKnown RBP eCLIP14.57□□□□□ -0.08
VARS2-209ENST00000477288 F8W735 103 aaPredicted RBP14.56□□□□□ -0.08
VARS2-209ENST00000477288 NRGNQ92686 78 aa14.56□□□□□ -0.08
VARS2-209ENST00000477288 C12orf74Q32Q52 190 aa14.56□□□□□ -0.08
VARS2-209ENST00000477288 SPART-AS1P0CW21 52 aa14.56□□□□□ -0.08
VARS2-209ENST00000477288 PKIGQ9Y2B9 76 aa14.56□□□□□ -0.08
VARS2-209ENST00000477288 NOTCH4Q99466 2003 aa14.55□□□□□ -0.08
VARS2-209ENST00000477288 ZFHX2Q9C0A1 2572 aaPredicted RBP14.55□□□□□ -0.08
VARS2-209ENST00000477288 COX7B2Q8TF08 81 aa14.55□□□□□ -0.08
VARS2-209ENST00000477288 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.55□□□□□ -0.082e-7■■■□□ 17.1
VARS2-209ENST00000477288 CENPVL3A0A0U1RRI6 287 aa14.55□□□□□ -0.08
VARS2-209ENST00000477288 WFDC9Q8NEX5 89 aa14.55□□□□□ -0.08
VARS2-209ENST00000477288 AGPAT4-IT1Q9H0P7 198 aa14.54□□□□□ -0.08
VARS2-209ENST00000477288 LTAP01374 205 aa14.54□□□□□ -0.08
VARS2-209ENST00000477288 IGHG2P01859 326 aa14.54□□□□□ -0.08
VARS2-209ENST00000477288 C16orf74Q96GX8 76 aa14.54□□□□□ -0.08
VARS2-209ENST00000477288 SLX1AQ9BQ83 275 aa14.54□□□□□ -0.08
VARS2-209ENST00000477288 CFC1BP0CG36 223 aa14.54□□□□□ -0.08
VARS2-209ENST00000477288 CFC1P0CG37 223 aa14.54□□□□□ -0.08
VARS2-209ENST00000477288 UBE2AP49459 152 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms