RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 OR51M1Q9H341 326 aa4.97□□□□□ -1.61
BRCA1-214ENST00000477152 ZNF492Q9P255 531 aa4.97□□□□□ -1.61
BRCA1-214ENST00000477152 KLF12Q9Y4X4 402 aa4.97□□□□□ -1.61
BRCA1-214ENST00000477152 LENEPQ9Y5L5 61 aa4.97□□□□□ -1.61
BRCA1-214ENST00000477152 PKD1P98161 4303 aa4.97□□□□□ -1.61
BRCA1-214ENST00000477152 FAT2Q9NYQ8 4349 aa4.97□□□□□ -1.61
BRCA1-214ENST00000477152 RBAKDNA6NC62 111 aa4.96□□□□□ -1.61
BRCA1-214ENST00000477152 TCRBP04435 133 aa4.96□□□□□ -1.61
BRCA1-214ENST00000477152 INAFM2P0DMQ5 153 aa4.96□□□□□ -1.61
BRCA1-214ENST00000477152 CRYBA4P53673 196 aa4.96□□□□□ -1.61
BRCA1-214ENST00000477152 TAS2R45P59539 299 aa4.96□□□□□ -1.61
BRCA1-214ENST00000477152 ERCC8Q13216 396 aa4.96□□□□□ -1.61
BRCA1-214ENST00000477152 BTN1A1Q13410 526 aa4.96□□□□□ -1.61
BRCA1-214ENST00000477152 LYPD5Q6UWN5 251 aa4.96□□□□□ -1.61
BRCA1-214ENST00000477152 M0R3E3 92 aa4.96□□□□□ -1.62
BRCA1-214ENST00000477152 CCSO14618 274 aa4.96□□□□□ -1.62
BRCA1-214ENST00000477152 PSCAO43653 123 aa4.96□□□□□ -1.62
BRCA1-214ENST00000477152 CIDEAO60543 219 aa4.96□□□□□ -1.62
BRCA1-214ENST00000477152 CYCSP99999 105 aaKnown RBP4.96□□□□□ -1.62
BRCA1-214ENST00000477152 CD300CQ08708 224 aa4.96□□□□□ -1.62
BRCA1-214ENST00000477152 FAM122CQ6P4D5 195 aa4.96□□□□□ -1.62
BRCA1-214ENST00000477152 FAM19A4Q96LR4 140 aa4.96□□□□□ -1.62
BRCA1-214ENST00000477152 PAXXQ9BUH6 204 aa4.96□□□□□ -1.62
BRCA1-214ENST00000477152 NPCDR1Q9BY65 106 aa4.96□□□□□ -1.62
BRCA1-214ENST00000477152 KRTAP1-5Q9BYS1 174 aa4.96□□□□□ -1.62
BRCA1-214ENST00000477152 NDUFA13Q9P0J0 144 aa4.96□□□□□ -1.62
BRCA1-214ENST00000477152 TRAV6A0A075B6T7 132 aa4.95□□□□□ -1.62
BRCA1-214ENST00000477152 FAM240BA0A1B0GVZ2 78 aa4.95□□□□□ -1.62
BRCA1-214ENST00000477152 E5RGE8 158 aa4.95□□□□□ -1.62
BRCA1-214ENST00000477152 IGHV3-53P01767 116 aa4.95□□□□□ -1.62
BRCA1-214ENST00000477152 PAPPA-AS1Q5QFB9 102 aa4.95□□□□□ -1.62
BRCA1-214ENST00000477152 EXOC3-AS1Q8N2X6 119 aa4.95□□□□□ -1.62
BRCA1-214ENST00000477152 OR10G4Q8NGN3 311 aa4.95□□□□□ -1.62
BRCA1-214ENST00000477152 CMTM2Q8TAZ6 248 aa4.95□□□□□ -1.62
BRCA1-214ENST00000477152 CCDC32Q9BV29 185 aa4.95□□□□□ -1.62
BRCA1-214ENST00000477152 NUDT15Q9NV35 164 aa4.95□□□□□ -1.62
BRCA1-214ENST00000477152 MRPL16Q9NX20 251 aaKnown RBP4.95□□□□□ -1.62
BRCA1-214ENST00000477152 DYNC1H1Q14204 4646 aaKnown RBP4.95□□□□□ -1.62
BRCA1-214ENST00000477152 DNAH2Q9P225 4427 aa4.95□□□□□ -1.62
BRCA1-214ENST00000477152 TRAV8-6A0A0B4J262 113 aa4.95□□□□□ -1.62
BRCA1-214ENST00000477152 GAGE12JA6NER3 117 aa4.95□□□□□ -1.62
BRCA1-214ENST00000477152 OR7C2O60412 319 aa4.95□□□□□ -1.62
BRCA1-214ENST00000477152 PRAF2O60831 178 aa4.95□□□□□ -1.62
BRCA1-214ENST00000477152 NDUFB4O95168 129 aa4.95□□□□□ -1.62
BRCA1-214ENST00000477152 PET100P0DJ07 73 aa4.95□□□□□ -1.62
BRCA1-214ENST00000477152 PYYP10082 97 aa4.95□□□□□ -1.62
BRCA1-214ENST00000477152 PRB4P10163 310 aaPredicted RBP4.95□□□□□ -1.62
BRCA1-214ENST00000477152 BTCP35070 178 aa4.95□□□□□ -1.62
BRCA1-214ENST00000477152 ZNF266Q14584 549 aa4.95□□□□□ -1.62
BRCA1-214ENST00000477152 KHDC3LQ587J8 217 aa4.95□□□□□ -1.62
BRCA1-214ENST00000477152 SCGB1C1Q8TD33 95 aa4.95□□□□□ -1.62
BRCA1-214ENST00000477152 TMED6Q8WW62 240 aa4.95□□□□□ -1.62
BRCA1-214ENST00000477152 KCNS1Q96KK3 526 aa4.95□□□□□ -1.62
BRCA1-214ENST00000477152 PKHD1P08F94 4074 aa4.94□□□□□ -1.62
BRCA1-214ENST00000477152 A0A087WTM6 91 aa4.94□□□□□ -1.62
BRCA1-214ENST00000477152 IGKV2-40A0A087WW87 121 aaPredicted RBP4.94□□□□□ -1.62
BRCA1-214ENST00000477152 TRAV4A0A0B4J268 109 aa4.94□□□□□ -1.62
BRCA1-214ENST00000477152 IGSF23A1L1A6 192 aa4.94□□□□□ -1.62
BRCA1-214ENST00000477152 IGKV2D-40P01614 121 aaPredicted RBP4.94□□□□□ -1.62
BRCA1-214ENST00000477152 PFN1P07737 140 aaKnown RBP4.94□□□□□ -1.62
BRCA1-214ENST00000477152 PPT1P50897 306 aa4.94□□□□□ -1.62
BRCA1-214ENST00000477152 Q6ZRN7 208 aaPredicted RBP4.94□□□□□ -1.62
BRCA1-214ENST00000477152 ZFAND2AQ8N6M9 145 aa4.94□□□□□ -1.62
BRCA1-214ENST00000477152 ARL6IP6Q8N6S5 226 aa4.94□□□□□ -1.62
BRCA1-214ENST00000477152 OR4C5Q8NGB2 326 aa4.94□□□□□ -1.62
BRCA1-214ENST00000477152 OR5C1Q8NGR4 320 aa4.94□□□□□ -1.62
BRCA1-214ENST00000477152 RASL10AQ92737 203 aa4.94□□□□□ -1.62
BRCA1-214ENST00000477152 RPL36ALQ969Q0 106 aaKnown RBP4.94□□□□□ -1.62
BRCA1-214ENST00000477152 NDFIP1Q9BT67 221 aa4.94□□□□□ -1.62
BRCA1-214ENST00000477152 SLC25A2Q9BXI2 301 aa4.94□□□□□ -1.62
BRCA1-214ENST00000477152 K7EQD1 137 aa4.93□□□□□ -1.62
BRCA1-214ENST00000477152 M0R2P5 195 aa4.93□□□□□ -1.62
BRCA1-214ENST00000477152 CRYGDP07320 174 aa4.93□□□□□ -1.62
BRCA1-214ENST00000477152 DNAH10OSP0CZ25 163 aa4.93□□□□□ -1.62
BRCA1-214ENST00000477152 TDRG1Q3Y452 100 aa4.93□□□□□ -1.62
BRCA1-214ENST00000477152 SEC22CQ9BRL7 303 aa4.93□□□□□ -1.62
BRCA1-214ENST00000477152 PRADC1Q9BSG0 188 aa4.93□□□□□ -1.62
BRCA1-214ENST00000477152 RBM38Q9H0Z9 239 aaKnown RBP4.93□□□□□ -1.62
BRCA1-214ENST00000477152 C11orf1Q9H5F2 150 aa4.93□□□□□ -1.62
BRCA1-214ENST00000477152 TP53TG3Q9ULZ0 132 aa4.93□□□□□ -1.62
BRCA1-214ENST00000477152 RYR1P21817 5038 aa4.93□□□□□ -1.62
BRCA1-214ENST00000477152 TRAV21A0A0B4J279 112 aa4.93□□□□□ -1.62
BRCA1-214ENST00000477152 K7EQM0 130 aa4.93□□□□□ -1.62
BRCA1-214ENST00000477152 RANP62826 216 aaKnown RBP4.93□□□□□ -1.62
BRCA1-214ENST00000477152 UBE2L3P68036 154 aaKnown RBP4.93□□□□□ -1.62
BRCA1-214ENST00000477152 TMEM183BQ1AE95 376 aa4.93□□□□□ -1.62
BRCA1-214ENST00000477152 Q5VSD8 79 aa4.93□□□□□ -1.62
BRCA1-214ENST00000477152 Q6AWC8 147 aa4.93□□□□□ -1.62
BRCA1-214ENST00000477152 MIR17HGQ75NE6 70 aa4.93□□□□□ -1.62
BRCA1-214ENST00000477152 TMEM183AQ8IXX5 376 aa4.93□□□□□ -1.62
BRCA1-214ENST00000477152 NHLRC2Q8NBF2 726 aa4.93□□□□□ -1.62
BRCA1-214ENST00000477152 ENKURQ8TC29 256 aa4.93□□□□□ -1.62
BRCA1-214ENST00000477152 S100ZQ8WXG8 99 aa4.93□□□□□ -1.62
BRCA1-214ENST00000477152 NMES1Q9C002 83 aa4.93□□□□□ -1.62
BRCA1-214ENST00000477152 WDR61Q9GZS3 305 aaKnown RBP4.93□□□□□ -1.62
BRCA1-214ENST00000477152 SDF2L1Q9HCN8 221 aa4.93□□□□□ -1.62
BRCA1-214ENST00000477152 IGLV5-52A0A0A0MRZ9 124 aa4.92□□□□□ -1.62
BRCA1-214ENST00000477152 SERTM2A0A1B0GWG4 89 aa4.92□□□□□ -1.62
BRCA1-214ENST00000477152 A0A1W2PPV4 95 aa4.92□□□□□ -1.62
BRCA1-214ENST00000477152 PLA2G10O15496 165 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms