RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 NUTF2P61970 127 aaKnown RBP8.66□□□□□ -1.02
NUP188-205ENST00000477069 UQCR10Q9UDW1 63 aa8.66□□□□□ -1.02
NUP188-205ENST00000477069 LAMTOR2Q9Y2Q5 125 aa8.66□□□□□ -1.02
NUP188-205ENST00000477069 RPL11P62913 178 aaKnown RBP8.66□□□□□ -1.02
NUP188-205ENST00000477069 LINC01545Q5VT33 79 aa8.66□□□□□ -1.02
NUP188-205ENST00000477069 LRRK2Q5S007 2527 aa8.66□□□□□ -1.02
NUP188-205ENST00000477069 TCF21O43680 179 aa8.65□□□□□ -1.02
NUP188-205ENST00000477069 ELANEP08246 267 aa8.65□□□□□ -1.02
NUP188-205ENST00000477069 LGALS1P09382 135 aaKnown RBP8.65□□□□□ -1.02
NUP188-205ENST00000477069 Q8N2B8 174 aa8.65□□□□□ -1.02
NUP188-205ENST00000477069 KLHDC1Q8N7A1 406 aa8.65□□□□□ -1.02
NUP188-205ENST00000477069 APCP25054 2843 aa8.65□□□□□ -1.02
NUP188-205ENST00000477069 TRAV21A0A0B4J279 112 aa8.65□□□□□ -1.03
NUP188-205ENST00000477069 SELENOKQ9Y6D0 94 aa8.65□□□□□ -1.03
NUP188-205ENST00000477069 POLQO75417 2590 aa8.65□□□□□ -1.03
NUP188-205ENST00000477069 CACNG7P62955 275 aa8.64□□□□□ -1.03
NUP188-205ENST00000477069 LGALS9O00182 355 aa8.64□□□□□ -1.03
NUP188-205ENST00000477069 SRD5A1P18405 259 aa8.64□□□□□ -1.03
NUP188-205ENST00000477069 EVI2AP22794 236 aa8.64□□□□□ -1.03
NUP188-205ENST00000477069 SAMD13Q5VXD3 122 aa8.64□□□□□ -1.03
NUP188-205ENST00000477069 AKAP9Q99996 3911 aa8.64□□□□□ -1.03
NUP188-205ENST00000477069 TENM4Q6N022 2769 aa8.64□□□□□ -1.03
NUP188-205ENST00000477069 IGKV3-7A0A075B6H7 116 aa8.64□□□□□ -1.03
NUP188-205ENST00000477069 KLLNB2CW77 178 aa8.64□□□□□ -1.03
NUP188-205ENST00000477069 H3BVH4 76 aa8.64□□□□□ -1.03
NUP188-205ENST00000477069 TNFRSF6BO95407 300 aa8.64□□□□□ -1.03
NUP188-205ENST00000477069 KIR3DS1Q14943 382 aa8.64□□□□□ -1.03
NUP188-205ENST00000477069 DEFB125Q8N687 156 aa8.64□□□□□ -1.03
NUP188-205ENST00000477069 UBE2E2Q96LR5 201 aa8.64□□□□□ -1.03
NUP188-205ENST00000477069 SCRT2Q9NQ03 307 aa8.64□□□□□ -1.03
NUP188-205ENST00000477069 IGHV4OR15-8A0A075B7B6 117 aa8.63□□□□□ -1.03
NUP188-205ENST00000477069 A0A087WW49 117 aa8.63□□□□□ -1.03
NUP188-205ENST00000477069 CSPG4Q6UVK1 2322 aa8.63□□□□□ -1.03
NUP188-205ENST00000477069 FAM208BQ5VWN6 2430 aa8.63□□□□□ -1.03
NUP188-205ENST00000477069 IGLV2-18A0A075B6J9 118 aa8.63□□□□□ -1.03
NUP188-205ENST00000477069 J3KRW8 73 aa8.63□□□□□ -1.03
NUP188-205ENST00000477069 HBDP02042 147 aa8.63□□□□□ -1.03
NUP188-205ENST00000477069 MED14OSP0DP75 135 aa8.63□□□□□ -1.03
NUP188-205ENST00000477069 NRACQ8N912 160 aa8.63□□□□□ -1.03
NUP188-205ENST00000477069 MCRIP2Q9BUT9 160 aaKnown RBP8.63□□□□□ -1.03
NUP188-205ENST00000477069 MS4A6AQ9H2W1 248 aa8.63□□□□□ -1.03
NUP188-205ENST00000477069 MAP1LC3AQ9H492 121 aa8.63□□□□□ -1.03
NUP188-205ENST00000477069 GATA1P15976 413 aaPredicted RBP8.62□□□□□ -1.03
NUP188-205ENST00000477069 ST20Q9HBF5 79 aa8.62□□□□□ -1.03
NUP188-205ENST00000477069 TMEM238LA0A1B0GVL6 79 aa8.62□□□□□ -1.03
NUP188-205ENST00000477069 hDV102S1A0JD36 115 aa8.62□□□□□ -1.03
NUP188-205ENST00000477069 ZNF25P17030 456 aaPredicted RBP8.62□□□□□ -1.03
NUP188-205ENST00000477069 ID1P41134 155 aa8.62□□□□□ -1.03
NUP188-205ENST00000477069 ANXA2RQ3ZCQ2 193 aa8.62□□□□□ -1.03
NUP188-205ENST00000477069 TSPOP30536 169 aa8.61□□□□□ -1.03
NUP188-205ENST00000477069 RNASE4P34096 147 aaKnown RBP8.61□□□□□ -1.03
NUP188-205ENST00000477069 Q6ZN92 141 aa8.61□□□□□ -1.03
NUP188-205ENST00000477069 TEX15Q9BXT5 2789 aa8.61□□□□□ -1.03
NUP188-205ENST00000477069 USP9YO00507 2555 aaPredicted RBP8.61□□□□□ -1.03
NUP188-205ENST00000477069 FXYD7P58549 80 aa8.61□□□□□ -1.03
NUP188-205ENST00000477069 SPANXN1Q5VSR9 72 aa8.61□□□□□ -1.03
NUP188-205ENST00000477069 TIMM8BQ9Y5J9 83 aaPredicted RBP8.61□□□□□ -1.03
NUP188-205ENST00000477069 K7EQG2 157 aa8.6□□□□□ -1.03
NUP188-205ENST00000477069 RNASE3P12724 160 aaKnown RBP8.6□□□□□ -1.03
NUP188-205ENST00000477069 HOXD3P31249 432 aaPredicted RBP8.6□□□□□ -1.03
NUP188-205ENST00000477069 SYNJ2BPP57105 145 aa8.6□□□□□ -1.03
NUP188-205ENST00000477069 OR2K2Q8NGT1 345 aa8.6□□□□□ -1.03
NUP188-205ENST00000477069 ODF3Q96PU9 254 aa8.6□□□□□ -1.03
NUP188-205ENST00000477069 NXT2Q9NPJ8 142 aaKnown RBP8.6□□□□□ -1.03
NUP188-205ENST00000477069 MRPS16Q9Y3D3 137 aaKnown RBP8.6□□□□□ -1.03
NUP188-205ENST00000477069 GOLT1BQ9Y3E0 138 aa8.6□□□□□ -1.03
NUP188-205ENST00000477069 NXPH4O95158 308 aa8.6□□□□□ -1.03
NUP188-205ENST00000477069 ASIPP42127 132 aa8.6□□□□□ -1.03
NUP188-205ENST00000477069 HNRNPA3P51991 378 aaKnown RBP8.6□□□□□ -1.03
NUP188-205ENST00000477069 Q8N8P6 123 aa8.6□□□□□ -1.03
NUP188-205ENST00000477069 ADAMTSL5Q6ZMM2 481 aa8.6□□□□□ -1.03
NUP188-205ENST00000477069 SMIM15Q7Z3B0 74 aa8.6□□□□□ -1.03
NUP188-205ENST00000477069 PMCHL2Q9BQD1 86 aa8.6□□□□□ -1.03
NUP188-205ENST00000477069 PTPN13Q12923 2485 aa8.59□□□□□ -1.03
NUP188-205ENST00000477069 TRAV26-2A0A0B4J265 109 aa8.59□□□□□ -1.03
NUP188-205ENST00000477069 H0Y8G0 127 aa8.59□□□□□ -1.03
NUP188-205ENST00000477069 LGALS9BQ3B8N2 356 aa8.59□□□□□ -1.03
NUP188-205ENST00000477069 LGALS9CQ6DKI2 356 aa8.59□□□□□ -1.03
NUP188-205ENST00000477069 WFDC3Q8IUB2 231 aa8.59□□□□□ -1.03
NUP188-205ENST00000477069 EPG5Q9HCE0 2579 aa8.59□□□□□ -1.03
NUP188-205ENST00000477069 GNRH2O43555 120 aa8.59□□□□□ -1.03
NUP188-205ENST00000477069 WFDC11Q8NEX6 87 aa8.59□□□□□ -1.03
NUP188-205ENST00000477069 MRAP2Q96G30 205 aa8.59□□□□□ -1.03
NUP188-205ENST00000477069 A0A0J9YX75 114 aa8.58□□□□□ -1.04
NUP188-205ENST00000477069 FCER1GP30273 86 aa8.58□□□□□ -1.04
NUP188-205ENST00000477069 C18orf65Q6ZTR6 163 aa8.58□□□□□ -1.04
NUP188-205ENST00000477069 TP73-AS1Q9UF72 201 aa8.58□□□□□ -1.04
NUP188-205ENST00000477069 SPRY2O43597 315 aa8.58□□□□□ -1.04
NUP188-205ENST00000477069 TMEM86BQ8N661 226 aa8.58□□□□□ -1.04
NUP188-205ENST00000477069 IFI27L1Q96BM0 104 aa8.58□□□□□ -1.04
NUP188-205ENST00000477069 DUX5Q96PT3 197 aa8.58□□□□□ -1.04
NUP188-205ENST00000477069 PDZD2O15018 2839 aa8.58□□□□□ -1.04
NUP188-205ENST00000477069 ABCA12Q86UK0 2595 aa8.58□□□□□ -1.04
NUP188-205ENST00000477069 NPSP0C0P6 89 aa8.57□□□□□ -1.04
NUP188-205ENST00000477069 ZNF688P0C7X2 276 aa8.57□□□□□ -1.04
NUP188-205ENST00000477069 TCTEX1D4Q5JR98 221 aa8.57□□□□□ -1.04
NUP188-205ENST00000477069 PSMG4Q5JS54 123 aa8.57□□□□□ -1.04
NUP188-205ENST00000477069 POM121L12Q8N7R1 296 aa8.57□□□□□ -1.04
NUP188-205ENST00000477069 LEPP41159 167 aa8.57□□□□□ -1.04
NUP188-205ENST00000477069 MUC4Q99102 2169 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms