RNA–Protein interactions for RNA: ENST00000476824.1

ITGA4-208, Transcript of integrin subunit alpha 4, human

TSL 1 (best)

Gene ITGA4, Length 1,004 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITGA4-208	ENST00000476824	PLA2G10	O15496	165 aa		2.57	□□□□□ -2
ITGA4-208	ENST00000476824	CD3D	P04234	171 aa		2.57	□□□□□ -2
ITGA4-208	ENST00000476824	IL5	P05113	134 aa		2.57	□□□□□ -2
ITGA4-208	ENST00000476824	SRP19	P09132	144 aa	Known RBP	2.57	□□□□□ -2
ITGA4-208	ENST00000476824	COX6A1	P12074	109 aa		2.57	□□□□□ -2
ITGA4-208	ENST00000476824	S100A4	P26447	101 aa	Known RBP	2.57	□□□□□ -2
ITGA4-208	ENST00000476824	CSN1S1	P47710	185 aa		2.57	□□□□□ -2
ITGA4-208	ENST00000476824	ZNF80	P51504	273 aa	Predicted RBP	2.57	□□□□□ -2
ITGA4-208	ENST00000476824	LINC00313	P59037	77 aa		2.57	□□□□□ -2
ITGA4-208	ENST00000476824	CXCL6	P80162	114 aa		2.57	□□□□□ -2
ITGA4-208	ENST00000476824	TMEM155	Q4W5P6	130 aa		2.57	□□□□□ -2
ITGA4-208	ENST00000476824	ZNF678	Q5SXM1	525 aa		2.57	□□□□□ -2
ITGA4-208	ENST00000476824	LGALS9C	Q6DKI2	356 aa		2.57	□□□□□ -2
ITGA4-208	ENST00000476824	EBLN2	Q6P2I7	272 aa		2.57	□□□□□ -2
ITGA4-208	ENST00000476824	PRNT	Q86SH4	94 aa		2.57	□□□□□ -2
ITGA4-208	ENST00000476824	TMEM252	Q8N6L7	170 aa		2.57	□□□□□ -2
ITGA4-208	ENST00000476824	TMEM105	Q8N8V8	129 aa		2.57	□□□□□ -2
ITGA4-208	ENST00000476824	OR10G2	Q8NGC3	310 aa		2.57	□□□□□ -2
ITGA4-208	ENST00000476824	OR5H2	Q8NGV7	314 aa		2.57	□□□□□ -2
ITGA4-208	ENST00000476824	C20orf78	Q9BR46	151 aa		2.57	□□□□□ -2
ITGA4-208	ENST00000476824	SLC35B3	Q9H1N7	401 aa		2.57	□□□□□ -2
ITGA4-208	ENST00000476824	ZNF702P	Q9H963	129 aa		2.57	□□□□□ -2
ITGA4-208	ENST00000476824	DPM3	Q9P2X0	92 aa		2.57	□□□□□ -2
ITGA4-208	ENST00000476824	DNAJC15	Q9Y5T4	150 aa		2.57	□□□□□ -2
ITGA4-208	ENST00000476824	DOCK8	Q8NF50	2099 aa		2.57	□□□□□ -2
ITGA4-208	ENST00000476824	APC2	O95996	2303 aa		2.57	□□□□□ -2
ITGA4-208	ENST00000476824	FBN2	P35556	2912 aa		2.56	□□□□□ -2
ITGA4-208	ENST00000476824	ASXL3	Q9C0F0	2248 aa		2.56	□□□□□ -2
ITGA4-208	ENST00000476824	TRBV7-7	A0A0K0K1E9	115 aa		2.56	□□□□□ -2
ITGA4-208	ENST00000476824	ZNF860	A6NHJ4	632 aa		2.56	□□□□□ -2
ITGA4-208	ENST00000476824		C9JQL5	133 aa		2.56	□□□□□ -2
ITGA4-208	ENST00000476824	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	2.56	□□□□□ -2
ITGA4-208	ENST00000476824		M0R129	80 aa		2.56	□□□□□ -2
ITGA4-208	ENST00000476824	SOD1	P00441	154 aa		2.56	□□□□□ -2
ITGA4-208	ENST00000476824	HLA-DPB1	P04440	258 aa		2.56	□□□□□ -2
ITGA4-208	ENST00000476824	CHTF8	P0CG12	524 aa		2.56	□□□□□ -2
ITGA4-208	ENST00000476824	UBE2B	P63146	152 aa		2.56	□□□□□ -2
ITGA4-208	ENST00000476824	CCL20	P78556	96 aa		2.56	□□□□□ -2
ITGA4-208	ENST00000476824	RBMY1F	Q15415	496 aa	Known RBP	2.56	□□□□□ -2
ITGA4-208	ENST00000476824	MPV17L2	Q567V2	206 aa		2.56	□□□□□ -2
ITGA4-208	ENST00000476824	H2AFV	Q71UI9	128 aa		2.56	□□□□□ -2
ITGA4-208	ENST00000476824	MDP1	Q86V88	176 aa		2.56	□□□□□ -2
ITGA4-208	ENST00000476824	PCP2	Q8IVA1	136 aa		2.56	□□□□□ -2
ITGA4-208	ENST00000476824	MORN4	Q8NDC4	146 aa		2.56	□□□□□ -2
ITGA4-208	ENST00000476824	FAM57A	Q8TBR7	257 aa		2.56	□□□□□ -2
ITGA4-208	ENST00000476824	TIMM17A	Q99595	171 aa		2.56	□□□□□ -2
ITGA4-208	ENST00000476824	CHAC1	Q9BUX1	264 aa		2.56	□□□□□ -2
ITGA4-208	ENST00000476824	ZNF286A	Q9HBT8	521 aa		2.56	□□□□□ -2
ITGA4-208	ENST00000476824		V9GYH0	126 aa		2.56	□□□□□ -2
ITGA4-208	ENST00000476824	MGA	Q8IWI9	3026 aa		2.56	□□□□□ -2
ITGA4-208	ENST00000476824	GREB1	Q4ZG55	1949 aa		2.56	□□□□□ -2
ITGA4-208	ENST00000476824	RAI1	Q7Z5J4	1906 aa	Predicted RBP	2.56	□□□□□ -2
ITGA4-208	ENST00000476824	CCDC88C	Q9P219	2028 aa		2.56	□□□□□ -2
ITGA4-208	ENST00000476824	MYO18A	Q92614	2054 aa	Known RBP	2.56	□□□□□ -2
ITGA4-208	ENST00000476824	SPAG17	Q6Q759	2223 aa		2.56	□□□□□ -2
ITGA4-208	ENST00000476824	GRIFIN	A4D1Z8	144 aa		2.55	□□□□□ -2
ITGA4-208	ENST00000476824	RBAKDN	A6NC62	111 aa		2.55	□□□□□ -2
ITGA4-208	ENST00000476824	COL6A6	A6NMZ7	2263 aa		2.55	□□□□□ -2
ITGA4-208	ENST00000476824	SNRPGP15	A8MWD9	76 aa		2.55	□□□□□ -2
ITGA4-208	ENST00000476824		A8MWL6	223 aa		2.55	□□□□□ -2
ITGA4-208	ENST00000476824	C17orf112	F2Z3M2	114 aa		2.55	□□□□□ -2
ITGA4-208	ENST00000476824	SYS1-DBNDD2	H3BUS1	97 aa		2.55	□□□□□ -2
ITGA4-208	ENST00000476824	TMEM256-PLSCR3	K7ERE1	68 aa		2.55	□□□□□ -2
ITGA4-208	ENST00000476824	SDCBP	O00560	298 aa	Predicted RBP	2.55	□□□□□ -2
ITGA4-208	ENST00000476824	LY6G6D	O95868	133 aa		2.55	□□□□□ -2
ITGA4-208	ENST00000476824	HLA-DQA1	P01909	254 aa		2.55	□□□□□ -2
ITGA4-208	ENST00000476824	HBD	P02042	147 aa		2.55	□□□□□ -2
ITGA4-208	ENST00000476824	CXCL1	P09341	107 aa		2.55	□□□□□ -2
ITGA4-208	ENST00000476824	CBLN1	P23435	193 aa		2.55	□□□□□ -2
ITGA4-208	ENST00000476824	FAU	P35544	74 aa	Known RBP	2.55	□□□□□ -2
ITGA4-208	ENST00000476824	SNRPD3	P62318	126 aa	Known RBP	2.55	□□□□□ -2
ITGA4-208	ENST00000476824	RPL23	P62829	140 aa	Known RBP	2.55	□□□□□ -2
ITGA4-208	ENST00000476824	IGLV3-21	P80748	117 aa	Predicted RBP	2.55	□□□□□ -2
ITGA4-208	ENST00000476824	C2CD3	Q4AC94	2353 aa		2.55	□□□□□ -2
ITGA4-208	ENST00000476824	ORMDL2	Q53FV1	153 aa		2.55	□□□□□ -2
ITGA4-208	ENST00000476824	SCX	Q7RTU7	201 aa		2.55	□□□□□ -2
ITGA4-208	ENST00000476824	TICRR	Q7Z2Z1	1910 aa		2.55	□□□□□ -2
ITGA4-208	ENST00000476824	ZNF101	Q8IZC7	436 aa		2.55	□□□□□ -2
ITGA4-208	ENST00000476824		Q8N7P7	452 aa		2.55	□□□□□ -2
ITGA4-208	ENST00000476824	SIGLECL1	Q8N7X8	197 aa		2.55	□□□□□ -2
ITGA4-208	ENST00000476824	STAG3L4	Q8TBR4	150 aa		2.55	□□□□□ -2
ITGA4-208	ENST00000476824	MYOZ3	Q8TDC0	251 aa		2.55	□□□□□ -2
ITGA4-208	ENST00000476824	LSM10	Q969L4	123 aa	Known RBP	2.55	□□□□□ -2
ITGA4-208	ENST00000476824	VSIG2	Q96IQ7	327 aa		2.55	□□□□□ -2
ITGA4-208	ENST00000476824	SCN2A	Q99250	2005 aa		2.55	□□□□□ -2
ITGA4-208	ENST00000476824	MGST2	Q99735	147 aa		2.55	□□□□□ -2
ITGA4-208	ENST00000476824	TMEM243	Q9BU79	118 aa		2.55	□□□□□ -2
ITGA4-208	ENST00000476824	POLR2J2	Q9GZM3	115 aa	Known RBP	2.55	□□□□□ -2
ITGA4-208	ENST00000476824	PARP12	Q9H0J9	701 aa	Known RBP	2.55	□□□□□ -2
ITGA4-208	ENST00000476824	DPH3P1	Q9H4G8	78 aa		2.55	□□□□□ -2
ITGA4-208	ENST00000476824	ITPR2	Q14571	2701 aa		2.55	□□□□□ -2
ITGA4-208	ENST00000476824	LRRK2	Q5S007	2527 aa		2.54	□□□□□ -2
ITGA4-208	ENST00000476824	ANK1	P16157	1881 aa		2.54	□□□□□ -2
ITGA4-208	ENST00000476824	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	2.54	□□□□□ -2
ITGA4-208	ENST00000476824	IGHV3-35	A0A0C4DH35	117 aa		2.54	□□□□□ -2
ITGA4-208	ENST00000476824		A0A0D9SEW6	157 aa		2.54	□□□□□ -2
ITGA4-208	ENST00000476824		A0A0D9SFI3	127 aa		2.54	□□□□□ -2
ITGA4-208	ENST00000476824	KLF18	A0A0U1RQI7	1052 aa		2.54	□□□□□ -2
ITGA4-208	ENST00000476824	MUC21	A0A140T8X8	626 aa		2.54	□□□□□ -2
ITGA4-208	ENST00000476824		H3BUT2	72 aa		2.54	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms