RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 KLK15Q9H2R5 256 aa12.23□□□□□ -0.45
VARS2-207ENST00000476162 FABP5P3A8MUU1 101 aa12.23□□□□□ -0.45
VARS2-207ENST00000476162 MRAP2Q96G30 205 aa12.23□□□□□ -0.45
VARS2-207ENST00000476162 IGHV3-11P01762 117 aa12.22□□□□□ -0.45
VARS2-207ENST00000476162 SAMD5Q5TGI4 173 aa12.22□□□□□ -0.45
VARS2-207ENST00000476162 AGPAT4-IT1Q9H0P7 198 aa12.22□□□□□ -0.45
VARS2-207ENST00000476162 SIVA1O15304 175 aa12.22□□□□□ -0.45
VARS2-207ENST00000476162 DSCR9P59020 149 aa12.22□□□□□ -0.45
VARS2-207ENST00000476162 AMN1Q8IY45 258 aa12.22□□□□□ -0.45
VARS2-207ENST00000476162 BBC3Q96PG8 261 aaPredicted RBP12.22□□□□□ -0.45
VARS2-207ENST00000476162 ZNF462Q96JM2 2506 aa12.21□□□□□ -0.45
VARS2-207ENST00000476162 CSPG4Q6UVK1 2322 aa12.21□□□□□ -0.45
VARS2-207ENST00000476162 IGLC6P0CF74 106 aa12.21□□□□□ -0.45
VARS2-207ENST00000476162 PF4V1P10720 104 aa12.21□□□□□ -0.45
VARS2-207ENST00000476162 TMEM95Q3KNT9 176 aa12.21□□□□□ -0.45
VARS2-207ENST00000476162 FAM104BQ5XKR9 115 aa12.21□□□□□ -0.45
VARS2-207ENST00000476162 LCNL1Q6ZST4 164 aa12.21□□□□□ -0.45
VARS2-207ENST00000476162 OR9G4Q8NGQ1 327 aa12.21□□□□□ -0.45
VARS2-207ENST00000476162 GLMPQ8WWB7 406 aa12.21□□□□□ -0.45
VARS2-207ENST00000476162 GEMIN7Q9H840 131 aaKnown RBP12.21□□□□□ -0.45
VARS2-207ENST00000476162 A1L4Q6 167 aa12.21□□□□□ -0.46
VARS2-207ENST00000476162 J3QR89 54 aa12.21□□□□□ -0.46
VARS2-207ENST00000476162 SMAD7O15105 426 aaKnown RBP12.21□□□□□ -0.46
VARS2-207ENST00000476162 NCR2O95944 276 aa12.21□□□□□ -0.46
VARS2-207ENST00000476162 TWIST1Q15672 202 aa12.21□□□□□ -0.46
VARS2-207ENST00000476162 OR4X2Q8NGF9 303 aa12.21□□□□□ -0.46
VARS2-207ENST00000476162 USMG5Q96IX5 58 aa12.21□□□□□ -0.46
VARS2-207ENST00000476162 SPANXB1Q9NS25 103 aaPredicted RBP12.21□□□□□ -0.46
VARS2-207ENST00000476162 FAM208BQ5VWN6 2430 aa12.2□□□□□ -0.46
VARS2-207ENST00000476162 D6R8Y8 96 aa12.2□□□□□ -0.46
VARS2-207ENST00000476162 H3BUA1 57 aa12.2□□□□□ -0.46
VARS2-207ENST00000476162 BRI3O95415 125 aa12.2□□□□□ -0.46
VARS2-207ENST00000476162 SRSF2Q01130 221 aaKnown RBP12.2□□□□□ -0.46
VARS2-207ENST00000476162 MRPL53Q96EL3 112 aaKnown RBP12.2□□□□□ -0.46
VARS2-207ENST00000476162 C16orf92Q96LL3 132 aa12.2□□□□□ -0.46
VARS2-207ENST00000476162 PSMG3-AS1Q96PY0 264 aa12.2□□□□□ -0.46
VARS2-207ENST00000476162 ZNF747Q9BV97 191 aa12.2□□□□□ -0.46
VARS2-207ENST00000476162 NDUFA4O00483 81 aa12.19□□□□□ -0.46
VARS2-207ENST00000476162 TMEM78Q5T7P6 136 aa12.19□□□□□ -0.46
VARS2-207ENST00000476162 SLC25A16P16260 332 aa12.19□□□□□ -0.46
VARS2-207ENST00000476162 GATA3P23771 443 aa12.19□□□□□ -0.46
VARS2-207ENST00000476162 PRSS3P2Q8NHM4 247 aa12.19□□□□□ -0.46
VARS2-207ENST00000476162 AP5S1Q9NUS5 200 aa12.19□□□□□ -0.46
VARS2-207ENST00000476162 SPAG8Q99932 426 aaPredicted RBP12.18□□□□□ -0.46
VARS2-207ENST00000476162 U3KQK5 164 aa12.18□□□□□ -0.46
VARS2-207ENST00000476162 FBN2P35556 2912 aa12.18□□□□□ -0.46
VARS2-207ENST00000476162 USP9YO00507 2555 aaPredicted RBP12.18□□□□□ -0.46
VARS2-207ENST00000476162 SMIM13P0DJ93 91 aa12.18□□□□□ -0.46
VARS2-207ENST00000476162 LINC01559Q495D7 138 aa12.18□□□□□ -0.46
VARS2-207ENST00000476162 MRPL51Q4U2R6 128 aaKnown RBP12.18□□□□□ -0.46
VARS2-207ENST00000476162 MTURNQ8N3F0 131 aa12.18□□□□□ -0.46
VARS2-207ENST00000476162 LINC01356Q8N9X3 169 aa12.18□□□□□ -0.46
VARS2-207ENST00000476162 MAPK1IP1LQ8NDC0 245 aa12.18□□□□□ -0.46
VARS2-207ENST00000476162 PRELID3AQ96N28 172 aa12.18□□□□□ -0.46
VARS2-207ENST00000476162 MSRB1Q9NZV6 116 aa12.18□□□□□ -0.46
VARS2-207ENST00000476162 TIMM8BQ9Y5J9 83 aaPredicted RBP12.18□□□□□ -0.46
VARS2-207ENST00000476162 LOC389332A0A1B0GUA5 103 aa12.17□□□□□ -0.46
VARS2-207ENST00000476162 TSPAN13O95857 204 aa12.17□□□□□ -0.46
VARS2-207ENST00000476162 IGLV1-40P01703 118 aa12.17□□□□□ -0.46
VARS2-207ENST00000476162 IFI27P40305 119 aaPredicted RBP12.17□□□□□ -0.46
VARS2-207ENST00000476162 C9orf47Q6ZRZ4 202 aa12.17□□□□□ -0.46
VARS2-207ENST00000476162 ORMDL3Q8N138 153 aa12.17□□□□□ -0.46
VARS2-207ENST00000476162 C20orf173Q96LM9 149 aa12.17□□□□□ -0.46
VARS2-207ENST00000476162 C11orf21Q9P2W6 132 aa12.17□□□□□ -0.46
VARS2-207ENST00000476162 POLQO75417 2590 aa12.17□□□□□ -0.46
VARS2-207ENST00000476162 IGKV3D-20A0A0C4DH25 116 aa12.17□□□□□ -0.46
VARS2-207ENST00000476162 F8W1H4 67 aa12.17□□□□□ -0.46
VARS2-207ENST00000476162 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.17□□□□□ -0.46
VARS2-207ENST00000476162 COX6B1P14854 86 aa12.17□□□□□ -0.46
VARS2-207ENST00000476162 SRSF1Q07955 248 aaKnown RBP eCLIP12.17□□□□□ -0.46
VARS2-207ENST00000476162 WFDC2Q14508 124 aa12.17□□□□□ -0.46
VARS2-207ENST00000476162 GPHB5Q86YW7 130 aa12.17□□□□□ -0.46
VARS2-207ENST00000476162 LRRK2Q5S007 2527 aa12.16□□□□□ -0.46
VARS2-207ENST00000476162 A0A096LNT2 108 aa12.16□□□□□ -0.46
VARS2-207ENST00000476162 IGHV4-59P01825 116 aa12.16□□□□□ -0.46
VARS2-207ENST00000476162 DEFB112Q30KQ8 113 aa12.16□□□□□ -0.46
VARS2-207ENST00000476162 FAM106AQ4KMX7 169 aa12.16□□□□□ -0.46
VARS2-207ENST00000476162 C9orf139Q6ZV77 190 aa12.16□□□□□ -0.46
VARS2-207ENST00000476162 C18orf15Q96N68 181 aa12.16□□□□□ -0.46
VARS2-207ENST00000476162 CNFNQ9BYD5 112 aa12.16□□□□□ -0.46
VARS2-207ENST00000476162 SMKR1H3BMG3 65 aa12.15□□□□□ -0.46
VARS2-207ENST00000476162 CFHR3Q02985 330 aa12.15□□□□□ -0.46
VARS2-207ENST00000476162 SIGLEC8Q9NYZ4 499 aa12.15□□□□□ -0.46
VARS2-207ENST00000476162 Q6ZQT7 251 aa12.15□□□□□ -0.46
VARS2-207ENST00000476162 ZNF843Q8N446 348 aa12.15□□□□□ -0.46
VARS2-207ENST00000476162 MRPL16Q9NX20 251 aaKnown RBP12.15□□□□□ -0.46
VARS2-207ENST00000476162 ANKRD17O75179 2603 aaKnown RBP12.15□□□□□ -0.47
VARS2-207ENST00000476162 TGFAP01135 160 aa12.14□□□□□ -0.47
VARS2-207ENST00000476162 CKS2P33552 79 aa12.14□□□□□ -0.47
VARS2-207ENST00000476162 LOXL1Q08397 574 aaPredicted RBP12.14□□□□□ -0.47
VARS2-207ENST00000476162 CENPEQ02224 2701 aa12.14□□□□□ -0.47
VARS2-207ENST00000476162 RPL11P62913 178 aaKnown RBP12.14□□□□□ -0.47
VARS2-207ENST00000476162 SOCS3O14543 225 aa12.13□□□□□ -0.47
VARS2-207ENST00000476162 TM4SF20Q53R12 229 aa12.13□□□□□ -0.47
VARS2-207ENST00000476162 PGPEP1Q9NXJ5 209 aa12.13□□□□□ -0.47
VARS2-207ENST00000476162 OR11H12B2RN74 326 aa12.13□□□□□ -0.47
VARS2-207ENST00000476162 NPYP01303 97 aa12.13□□□□□ -0.47
VARS2-207ENST00000476162 LGALS9BQ3B8N2 356 aa12.13□□□□□ -0.47
VARS2-207ENST00000476162 LGALS9CQ6DKI2 356 aa12.13□□□□□ -0.47
VARS2-207ENST00000476162 SH2D6Q7Z4S9 175 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 192.1 ms