RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 NMES1Q9C002 83 aa7.27□□□□□ -1.25
CDRT1-205ENST00000475944 SDF2L1Q9HCN8 221 aa7.27□□□□□ -1.25
CDRT1-205ENST00000475944 OR5AC2Q9NZP5 309 aa7.27□□□□□ -1.25
CDRT1-205ENST00000475944 FAT1Q14517 4588 aa7.26□□□□□ -1.25
CDRT1-205ENST00000475944 GNRH2O43555 120 aa7.26□□□□□ -1.25
CDRT1-205ENST00000475944 SIX6O95475 246 aa7.26□□□□□ -1.25
CDRT1-205ENST00000475944 PFN1P07737 140 aaKnown RBP7.26□□□□□ -1.25
CDRT1-205ENST00000475944 CYCSP99999 105 aaKnown RBP7.26□□□□□ -1.25
CDRT1-205ENST00000475944 ARL6IP6Q8N6S5 226 aa7.26□□□□□ -1.25
CDRT1-205ENST00000475944 Q8N814 137 aa7.26□□□□□ -1.25
CDRT1-205ENST00000475944 KCNS1Q96KK3 526 aa7.26□□□□□ -1.25
CDRT1-205ENST00000475944 PRADC1Q9BSG0 188 aa7.26□□□□□ -1.25
CDRT1-205ENST00000475944 Q9HAA7 133 aa7.26□□□□□ -1.25
CDRT1-205ENST00000475944 OTORQ9NRC9 128 aa7.26□□□□□ -1.25
CDRT1-205ENST00000475944 RPH3ALQ9UNE2 315 aa7.26□□□□□ -1.25
CDRT1-205ENST00000475944 PGPA6NDG6 321 aa7.25□□□□□ -1.25
CDRT1-205ENST00000475944 FBLL1A6NHQ2 334 aaKnown RBP7.25□□□□□ -1.25
CDRT1-205ENST00000475944 H0YIZ8 118 aa7.25□□□□□ -1.25
CDRT1-205ENST00000475944 CIDEAO60543 219 aa7.25□□□□□ -1.25
CDRT1-205ENST00000475944 TYMSP04818 313 aa7.25□□□□□ -1.25
CDRT1-205ENST00000475944 RHOHQ15669 191 aa7.25□□□□□ -1.25
CDRT1-205ENST00000475944 OR10J3Q5JRS4 329 aa7.25□□□□□ -1.25
CDRT1-205ENST00000475944 SCGB1C1Q8TD33 95 aa7.25□□□□□ -1.25
CDRT1-205ENST00000475944 TREM1Q9NP99 234 aa7.25□□□□□ -1.25
CDRT1-205ENST00000475944 TRBV6-4A0A1B0GX49 114 aa7.24□□□□□ -1.25
CDRT1-205ENST00000475944 F6UZH7 168 aa7.24□□□□□ -1.25
CDRT1-205ENST00000475944 J3QL48 77 aa7.24□□□□□ -1.25
CDRT1-205ENST00000475944 C1QBP02746 253 aa7.24□□□□□ -1.25
CDRT1-205ENST00000475944 LAGE3Q14657 143 aa7.24□□□□□ -1.25
CDRT1-205ENST00000475944 LELP1Q5T871 98 aa7.24□□□□□ -1.25
CDRT1-205ENST00000475944 GOLT1AQ6ZVE7 132 aa7.24□□□□□ -1.25
CDRT1-205ENST00000475944 ASB13Q8WXK3 278 aa7.24□□□□□ -1.25
CDRT1-205ENST00000475944 NDFIP1Q9BT67 221 aa7.24□□□□□ -1.25
CDRT1-205ENST00000475944 NDUFA13Q9P0J0 144 aa7.24□□□□□ -1.25
CDRT1-205ENST00000475944 MBD2Q9UBB5 411 aa7.24□□□□□ -1.25
CDRT1-205ENST00000475944 VPS13BQ7Z7G8 4022 aa7.24□□□□□ -1.25
CDRT1-205ENST00000475944 IGHV3-30P01768 117 aa7.23□□□□□ -1.25
CDRT1-205ENST00000475944 IGHV3-33P01772 117 aa7.23□□□□□ -1.25
CDRT1-205ENST00000475944 PET100P0DJ07 73 aa7.23□□□□□ -1.25
CDRT1-205ENST00000475944 IGHV3-30-3P0DP02 117 aa7.23□□□□□ -1.25
CDRT1-205ENST00000475944 IGHV3-30-5P0DP03 117 aa7.23□□□□□ -1.25
CDRT1-205ENST00000475944 ASAH1Q13510 395 aa7.23□□□□□ -1.25
CDRT1-205ENST00000475944 ZNF876PQ49A33 203 aa7.23□□□□□ -1.25
CDRT1-205ENST00000475944 PQLC2Q6ZP29 291 aa7.23□□□□□ -1.25
CDRT1-205ENST00000475944 SLC25A29Q8N8R3 303 aa7.23□□□□□ -1.25
CDRT1-205ENST00000475944 ENKURQ8TC29 256 aa7.23□□□□□ -1.25
CDRT1-205ENST00000475944 TM2D2Q9BX73 214 aa7.23□□□□□ -1.25
CDRT1-205ENST00000475944 HSPB11Q9Y547 144 aa7.23□□□□□ -1.25
CDRT1-205ENST00000475944 TRAV8-1A0A0A6YYK1 113 aa7.22□□□□□ -1.25
CDRT1-205ENST00000475944 SERTM2A0A1B0GWG4 89 aa7.22□□□□□ -1.25
CDRT1-205ENST00000475944 A0A1W2PPV4 95 aa7.22□□□□□ -1.25
CDRT1-205ENST00000475944 RS1O15537 224 aa7.22□□□□□ -1.25
CDRT1-205ENST00000475944 PLA2G1BP04054 148 aaKnown RBP7.22□□□□□ -1.25
CDRT1-205ENST00000475944 ACOT6Q3I5F7 207 aaPredicted RBP7.22□□□□□ -1.25
CDRT1-205ENST00000475944 CFAP126Q5VTH2 177 aa7.22□□□□□ -1.25
CDRT1-205ENST00000475944 PPP1R1CQ8WVI7 109 aa7.22□□□□□ -1.25
CDRT1-205ENST00000475944 TVP23CQ96ET8 276 aa7.22□□□□□ -1.25
CDRT1-205ENST00000475944 GTSF1LQ9H1H1 148 aa7.22□□□□□ -1.25
CDRT1-205ENST00000475944 SH3BGRL3Q9H299 93 aa7.22□□□□□ -1.25
CDRT1-205ENST00000475944 FAM30AQ9NZY2 134 aa7.22□□□□□ -1.25
CDRT1-205ENST00000475944 MYCBP2O75592 4640 aa7.22□□□□□ -1.25
CDRT1-205ENST00000475944 EIF3GO75821 320 aaKnown RBP eCLIP7.21□□□□□ -1.26
CDRT1-205ENST00000475944 MGST1P10620 155 aaKnown RBP7.21□□□□□ -1.26
CDRT1-205ENST00000475944 RPL12P30050 165 aaKnown RBP7.21□□□□□ -1.26
CDRT1-205ENST00000475944 LINC00299Q6ZSB3 139 aa7.21□□□□□ -1.26
CDRT1-205ENST00000475944 ATP6V0E2Q8NHE4 81 aa7.21□□□□□ -1.26
CDRT1-205ENST00000475944 SMIM3Q9BZL3 60 aa7.21□□□□□ -1.26
CDRT1-205ENST00000475944 FLG2Q5D862 2391 aaPredicted RBP7.21□□□□□ -1.26
CDRT1-205ENST00000475944 SRRM2Q9UQ35 2752 aaKnown RBP7.21□□□□□ -1.26
CDRT1-205ENST00000475944 IGHV3-73A0A0B4J1V6 119 aa7.2□□□□□ -1.26
CDRT1-205ENST00000475944 K7EQM0 130 aa7.2□□□□□ -1.26
CDRT1-205ENST00000475944 TAAR5O14804 337 aa7.2□□□□□ -1.26
CDRT1-205ENST00000475944 MPC2O95563 127 aa7.2□□□□□ -1.26
CDRT1-205ENST00000475944 H2BFSP57053 126 aa7.2□□□□□ -1.26
CDRT1-205ENST00000475944 GNG5P63218 68 aa7.2□□□□□ -1.26
CDRT1-205ENST00000475944 DPPA3Q6W0C5 159 aa7.2□□□□□ -1.26
CDRT1-205ENST00000475944 Q6ZSA8 131 aa7.2□□□□□ -1.26
CDRT1-205ENST00000475944 S100ZQ8WXG8 99 aa7.2□□□□□ -1.26
CDRT1-205ENST00000475944 C9orf85Q96MD7 179 aa7.2□□□□□ -1.26
CDRT1-205ENST00000475944 TRAV8-3A0A0A6YYJ7 113 aa7.19□□□□□ -1.26
CDRT1-205ENST00000475944 INMT-MINDY4F8WBC2 141 aa7.19□□□□□ -1.26
CDRT1-205ENST00000475944 ZFP69Q49AA0 526 aa7.19□□□□□ -1.26
CDRT1-205ENST00000475944 TOR2AQ5JU69 321 aa7.19□□□□□ -1.26
CDRT1-205ENST00000475944 ZNF506Q5JVG8 444 aa7.19□□□□□ -1.26
CDRT1-205ENST00000475944 C5orf17Q8NAS9 161 aa7.19□□□□□ -1.26
CDRT1-205ENST00000475944 PTH2Q96A98 100 aa7.19□□□□□ -1.26
CDRT1-205ENST00000475944 SGK494Q96LW2 274 aa7.19□□□□□ -1.26
CDRT1-205ENST00000475944 PGPEP1LA6NFU8 196 aa7.18□□□□□ -1.26
CDRT1-205ENST00000475944 KRTAP29-1A8MX34 341 aaPredicted RBP7.18□□□□□ -1.26
CDRT1-205ENST00000475944 HMGB3O15347 200 aaKnown RBP7.18□□□□□ -1.26
CDRT1-205ENST00000475944 UPK1BO75841 260 aa7.18□□□□□ -1.26
CDRT1-205ENST00000475944 GCGP01275 180 aa7.18□□□□□ -1.26
CDRT1-205ENST00000475944 ARL14EPLP0DKL9 152 aa7.18□□□□□ -1.26
CDRT1-205ENST00000475944 ZNF80P51504 273 aaPredicted RBP7.18□□□□□ -1.26
CDRT1-205ENST00000475944 RAB2AP61019 212 aa7.18□□□□□ -1.26
CDRT1-205ENST00000475944 WFDC2Q14508 124 aa7.18□□□□□ -1.26
CDRT1-205ENST00000475944 LINC00528Q8N1L1 170 aa7.18□□□□□ -1.26
CDRT1-205ENST00000475944 OR10G9Q8NGN4 311 aa7.18□□□□□ -1.26
CDRT1-205ENST00000475944 OR10G7Q8NGN6 311 aa7.18□□□□□ -1.26
CDRT1-205ENST00000475944 DEFB104AQ8WTQ1 72 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms