RNA–Protein interactions for RNA: ENST00000475580.5

VPS8-222, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 318 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-222	ENST00000475580	IGHV3-53	P01767	116 aa		11.49	□□□□□ -0.57
VPS8-222	ENST00000475580	PRNT	Q86SH4	94 aa		11.49	□□□□□ -0.57
VPS8-222	ENST00000475580	ZNRF2	Q8NHG8	242 aa		11.49	□□□□□ -0.57
VPS8-222	ENST00000475580	SPX	Q9BT56	116 aa		11.49	□□□□□ -0.57
VPS8-222	ENST00000475580	ZNF471	Q9BX82	626 aa	Predicted RBP	11.49	□□□□□ -0.57
VPS8-222	ENST00000475580	TRAV34	A0A0B4J273	112 aa		11.48	□□□□□ -0.57
VPS8-222	ENST00000475580	KANTR	A0A1W2PQU2	76 aa		11.48	□□□□□ -0.57
VPS8-222	ENST00000475580	RTL8C	O15255	209 aa		11.48	□□□□□ -0.57
VPS8-222	ENST00000475580	GCG	P01275	180 aa		11.48	□□□□□ -0.57
VPS8-222	ENST00000475580		Q6ZNX1	250 aa		11.48	□□□□□ -0.57
VPS8-222	ENST00000475580	TMUB2	Q71RG4	321 aa		11.48	□□□□□ -0.57
VPS8-222	ENST00000475580	RASL10A	Q92737	203 aa		11.48	□□□□□ -0.57
VPS8-222	ENST00000475580	FBLL1	A6NHQ2	334 aa	Known RBP	11.47	□□□□□ -0.57
VPS8-222	ENST00000475580	PEX7	O00628	323 aa		11.47	□□□□□ -0.57
VPS8-222	ENST00000475580	IFNA7	P01567	189 aa		11.47	□□□□□ -0.57
VPS8-222	ENST00000475580	PFN1	P07737	140 aa	Known RBP	11.47	□□□□□ -0.57
VPS8-222	ENST00000475580	CCL18	P55774	89 aa		11.47	□□□□□ -0.57
VPS8-222	ENST00000475580	FHL2	Q14192	279 aa		11.47	□□□□□ -0.57
VPS8-222	ENST00000475580	MBD3L1	Q8WWY6	194 aa		11.47	□□□□□ -0.57
VPS8-222	ENST00000475580	NKX6-2	Q9C056	277 aa	Predicted RBP	11.47	□□□□□ -0.57
VPS8-222	ENST00000475580	SDF2L1	Q9HCN8	221 aa		11.47	□□□□□ -0.57
VPS8-222	ENST00000475580		A0A096LPF7	62 aa		11.46	□□□□□ -0.57
VPS8-222	ENST00000475580	ESRG	Q1W209	222 aa		11.46	□□□□□ -0.57
VPS8-222	ENST00000475580	SMUG1	Q53HV7	270 aa		11.46	□□□□□ -0.57
VPS8-222	ENST00000475580	SAPCD1	Q5SSQ6	148 aa		11.46	□□□□□ -0.57
VPS8-222	ENST00000475580		Q86TA4	180 aa		11.46	□□□□□ -0.57
VPS8-222	ENST00000475580	TCTE3	Q8IZS6	198 aa		11.46	□□□□□ -0.57
VPS8-222	ENST00000475580	ZNF479	Q96JC4	524 aa		11.46	□□□□□ -0.57
VPS8-222	ENST00000475580	KCNS1	Q96KK3	526 aa		11.46	□□□□□ -0.57
VPS8-222	ENST00000475580	ARL2-SNX15	V9GYD0	113 aa		11.46	□□□□□ -0.57
VPS8-222	ENST00000475580	UMAD1	C9J7I0	102 aa		11.45	□□□□□ -0.58
VPS8-222	ENST00000475580	SFTA3	P0C7M3	94 aa		11.45	□□□□□ -0.58
VPS8-222	ENST00000475580	STOML3	Q8TAV4	291 aa		11.45	□□□□□ -0.58
VPS8-222	ENST00000475580	FAM213B	Q8TBF2	198 aa		11.45	□□□□□ -0.58
VPS8-222	ENST00000475580	HIST1H2BA	Q96A08	127 aa		11.45	□□□□□ -0.58
VPS8-222	ENST00000475580		M0R2P5	195 aa		11.44	□□□□□ -0.58
VPS8-222	ENST00000475580	PFDN1	O60925	122 aa		11.44	□□□□□ -0.58
VPS8-222	ENST00000475580	CRYBA4	P53673	196 aa		11.44	□□□□□ -0.58
VPS8-222	ENST00000475580	LGALSL	Q3ZCW2	172 aa	Predicted RBP	11.44	□□□□□ -0.58
VPS8-222	ENST00000475580	LINC00336	Q6ZUF6	198 aa		11.44	□□□□□ -0.58
VPS8-222	ENST00000475580	SFT2D1	Q8WV19	159 aa		11.44	□□□□□ -0.58
VPS8-222	ENST00000475580	PRO0255	Q9UI72	69 aa		11.44	□□□□□ -0.58
VPS8-222	ENST00000475580	NBDY	A0A0U1RRE5	68 aa		11.43	□□□□□ -0.58
VPS8-222	ENST00000475580		A0A1B0GVY2	172 aa		11.43	□□□□□ -0.58
VPS8-222	ENST00000475580	PAX4	O43316	350 aa		11.43	□□□□□ -0.58
VPS8-222	ENST00000475580	TPT1	P13693	172 aa	Known RBP	11.43	□□□□□ -0.58
VPS8-222	ENST00000475580	PPT1	P50897	306 aa		11.43	□□□□□ -0.58
VPS8-222	ENST00000475580	EIF5A	P63241	154 aa	Known RBP	11.43	□□□□□ -0.58
VPS8-222	ENST00000475580	ZFP69	Q49AA0	526 aa		11.43	□□□□□ -0.58
VPS8-222	ENST00000475580	DPPA3	Q6W0C5	159 aa		11.43	□□□□□ -0.58
VPS8-222	ENST00000475580	C9orf85	Q96MD7	179 aa		11.43	□□□□□ -0.58
VPS8-222	ENST00000475580	UPK3B	Q9BT76	320 aa		11.43	□□□□□ -0.58
VPS8-222	ENST00000475580	HHLA3	Q9XRX5	114 aa		11.43	□□□□□ -0.58
VPS8-222	ENST00000475580	TRAV4	A0A0B4J268	109 aa		11.42	□□□□□ -0.58
VPS8-222	ENST00000475580	IGKV3D-20	A0A0C4DH25	116 aa		11.42	□□□□□ -0.58
VPS8-222	ENST00000475580		A0A1B0GV50	99 aa		11.42	□□□□□ -0.58
VPS8-222	ENST00000475580	PAGE4	O60829	102 aa		11.42	□□□□□ -0.58
VPS8-222	ENST00000475580	SLA	Q13239	276 aa		11.42	□□□□□ -0.58
VPS8-222	ENST00000475580	CST9LP1	Q5W188	147 aa		11.42	□□□□□ -0.58
VPS8-222	ENST00000475580	COX8C	Q7Z4L0	72 aa		11.42	□□□□□ -0.58
VPS8-222	ENST00000475580	MRPS16	Q9Y3D3	137 aa	Known RBP	11.42	□□□□□ -0.58
VPS8-222	ENST00000475580	RNASE3	P12724	160 aa	Known RBP	11.41	□□□□□ -0.58
VPS8-222	ENST00000475580	CRIP1	P50238	77 aa		11.41	□□□□□ -0.58
VPS8-222	ENST00000475580	ZC2HC1A	Q96GY0	325 aa		11.41	□□□□□ -0.58
VPS8-222	ENST00000475580	TCEAL7	Q9BRU2	100 aa		11.41	□□□□□ -0.58
VPS8-222	ENST00000475580		Q9H8V8	135 aa		11.41	□□□□□ -0.58
VPS8-222	ENST00000475580	ICOS	Q9Y6W8	199 aa		11.41	□□□□□ -0.58
VPS8-222	ENST00000475580	TRGV4	A0A0C4DH28	118 aa		11.4	□□□□□ -0.58
VPS8-222	ENST00000475580	TRBV6-1	A0A0K0K1D8	114 aa		11.4	□□□□□ -0.58
VPS8-222	ENST00000475580	PRSS29P	A6NIE9	313 aa		11.4	□□□□□ -0.58
VPS8-222	ENST00000475580	C1QB	P02746	253 aa		11.4	□□□□□ -0.58
VPS8-222	ENST00000475580	H2AFB1	P0C5Y9	115 aa		11.4	□□□□□ -0.58
VPS8-222	ENST00000475580	FMC1	Q96HJ9	113 aa		11.4	□□□□□ -0.58
VPS8-222	ENST00000475580	KRTAP1-5	Q9BYS1	174 aa		11.4	□□□□□ -0.58
VPS8-222	ENST00000475580	ZFP30	Q9Y2G7	519 aa		11.4	□□□□□ -0.58
VPS8-222	ENST00000475580	PKD1	P98161	4303 aa		11.39	□□□□□ -0.59
VPS8-222	ENST00000475580	FABP5P3	A8MUU1	101 aa		11.39	□□□□□ -0.59
VPS8-222	ENST00000475580	LTA	P01374	205 aa		11.39	□□□□□ -0.59
VPS8-222	ENST00000475580	C1orf134	Q5TEV5	83 aa		11.39	□□□□□ -0.59
VPS8-222	ENST00000475580	OR4C5	Q8NGB2	326 aa		11.39	□□□□□ -0.59
VPS8-222	ENST00000475580	PGPEP1L	A6NFU8	196 aa		11.38	□□□□□ -0.59
VPS8-222	ENST00000475580		C9JCJ5	164 aa		11.38	□□□□□ -0.59
VPS8-222	ENST00000475580	AKR1C3	P42330	323 aa		11.38	□□□□□ -0.59
VPS8-222	ENST00000475580	UBE2G1	P62253	170 aa		11.38	□□□□□ -0.59
VPS8-222	ENST00000475580	CCL20	P78556	96 aa		11.38	□□□□□ -0.59
VPS8-222	ENST00000475580	ZNF876P	Q49A33	203 aa		11.38	□□□□□ -0.59
VPS8-222	ENST00000475580	ZNF575	Q86XF7	245 aa		11.38	□□□□□ -0.59
VPS8-222	ENST00000475580	PTH2	Q96A98	100 aa		11.38	□□□□□ -0.59
VPS8-222	ENST00000475580	DYNC1H1	Q14204	4646 aa	Known RBP	11.37	□□□□□ -0.59
VPS8-222	ENST00000475580	hCG_2014768	A0A024R1R8	64 aa		11.37	□□□□□ -0.59
VPS8-222	ENST00000475580	SCO2	A0A1W2PP80	73 aa		11.37	□□□□□ -0.59
VPS8-222	ENST00000475580		K7EQD1	137 aa		11.37	□□□□□ -0.59
VPS8-222	ENST00000475580	RS1	O15537	224 aa		11.37	□□□□□ -0.59
VPS8-222	ENST00000475580	SH2D1A	O60880	128 aa		11.37	□□□□□ -0.59
VPS8-222	ENST00000475580	GATA1	P15976	413 aa	Predicted RBP	11.37	□□□□□ -0.59
VPS8-222	ENST00000475580	MRPL23	Q16540	153 aa	Known RBP	11.37	□□□□□ -0.59
VPS8-222	ENST00000475580	ZNF506	Q5JVG8	444 aa		11.37	□□□□□ -0.59
VPS8-222	ENST00000475580	CFAP126	Q5VTH2	177 aa		11.37	□□□□□ -0.59
VPS8-222	ENST00000475580	DNAH11	Q96DT5	4516 aa		11.37	□□□□□ -0.59
VPS8-222	ENST00000475580	TRAV1-1	A0A0B4J248	108 aa		11.36	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 35 ms