RNA–Protein interactions for RNA: ENST00000475255.5

SEMA4D-217, Transcript of semaphorin 4D, humanhuman

TSL 1 (best)

Gene SEMA4D, Length 3,053 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-217ENST00000475255 IGHV7-81A0A0B4J1V7 117 aa10.52□□□□□ -0.72
SEMA4D-217ENST00000475255 CKS1BP61024 79 aa10.52□□□□□ -0.72
SEMA4D-217ENST00000475255 LINC01559Q495D7 138 aa10.52□□□□□ -0.72
SEMA4D-217ENST00000475255 PRR9Q5T870 116 aa10.52□□□□□ -0.72
SEMA4D-217ENST00000475255 ZNF502Q8TBZ5 544 aa10.52□□□□□ -0.72
SEMA4D-217ENST00000475255 MRPL16Q9NX20 251 aaKnown RBP10.52□□□□□ -0.72
SEMA4D-217ENST00000475255 PGPEP1Q9NXJ5 209 aa10.52□□□□□ -0.72
SEMA4D-217ENST00000475255 NDUFS8O00217 210 aa10.52□□□□□ -0.73
SEMA4D-217ENST00000475255 CEACAM3P40198 252 aa10.52□□□□□ -0.73
SEMA4D-217ENST00000475255 PSMB2P49721 201 aa10.52□□□□□ -0.73
SEMA4D-217ENST00000475255 SRSF9Q13242 221 aaKnown RBP eCLIP10.52□□□□□ -0.73
SEMA4D-217ENST00000475255 COX8CQ7Z4L0 72 aa10.52□□□□□ -0.73
SEMA4D-217ENST00000475255 CNFNQ9BYD5 112 aa10.52□□□□□ -0.73
SEMA4D-217ENST00000475255 MUC6Q6W4X9 2439 aa10.52□□□□□ -0.73
SEMA4D-217ENST00000475255 SORL1Q92673 2214 aa10.52□□□□□ -0.73
SEMA4D-217ENST00000475255 IGHV7-4-1A0A0J9YVY3 117 aa10.52□□□□□ -0.73
SEMA4D-217ENST00000475255 BUB3O43684 328 aa10.52□□□□□ -0.73
SEMA4D-217ENST00000475255 A0A087WX48 190 aa10.51□□□□□ -0.73
SEMA4D-217ENST00000475255 OR11H12B2RN74 326 aa10.51□□□□□ -0.73
SEMA4D-217ENST00000475255 IGF2-ASQ6U949 168 aa10.51□□□□□ -0.73
SEMA4D-217ENST00000475255 VMO1Q7Z5L0 202 aa10.51□□□□□ -0.73
SEMA4D-217ENST00000475255 OR11H1Q8NG94 326 aa10.51□□□□□ -0.73
SEMA4D-217ENST00000475255 OR11H2Q8NH07 326 aa10.51□□□□□ -0.73
SEMA4D-217ENST00000475255 GLMPQ8WWB7 406 aa10.51□□□□□ -0.73
SEMA4D-217ENST00000475255 MSRB2Q9Y3D2 182 aa10.51□□□□□ -0.73
SEMA4D-217ENST00000475255 SPG11Q96JI7 2443 aa10.51□□□□□ -0.73
SEMA4D-217ENST00000475255 F8W1H4 67 aa10.51□□□□□ -0.73
SEMA4D-217ENST00000475255 HLA-DRB4P13762 266 aa10.51□□□□□ -0.73
SEMA4D-217ENST00000475255 KLHL30-AS1Q8NEE0 82 aa10.51□□□□□ -0.73
SEMA4D-217ENST00000475255 ATP6V0BQ99437 205 aa10.51□□□□□ -0.73
SEMA4D-217ENST00000475255 HLA-DRB4X5D2U9 266 aa10.51□□□□□ -0.73
SEMA4D-217ENST00000475255 A0A1B0GV72 72 aa10.5□□□□□ -0.73
SEMA4D-217ENST00000475255 MGPP08493 103 aa10.5□□□□□ -0.73
SEMA4D-217ENST00000475255 CDSNQ15517 529 aa10.5□□□□□ -0.73
SEMA4D-217ENST00000475255 TMEM78Q5T7P6 136 aa10.5□□□□□ -0.73
SEMA4D-217ENST00000475255 OR11H6Q8NGC7 330 aa10.5□□□□□ -0.73
SEMA4D-217ENST00000475255 SCGB3A1Q96QR1 104 aa10.5□□□□□ -0.73
SEMA4D-217ENST00000475255 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.5□□□□□ -0.73
SEMA4D-217ENST00000475255 TRAV8-2A0A0B4J237 113 aa10.5□□□□□ -0.73
SEMA4D-217ENST00000475255 RRN3P1Q2M238 152 aa10.5□□□□□ -0.73
SEMA4D-217ENST00000475255 C14orf178Q8N769 122 aaPredicted RBP10.5□□□□□ -0.73
SEMA4D-217ENST00000475255 SYT8Q8NBV8 401 aa10.5□□□□□ -0.73
SEMA4D-217ENST00000475255 PIFOQ8TCI5 191 aa10.5□□□□□ -0.73
SEMA4D-217ENST00000475255 LINC01549A6NIU2 74 aa10.49□□□□□ -0.73
SEMA4D-217ENST00000475255 ATP6V0E1O15342 81 aa10.49□□□□□ -0.73
SEMA4D-217ENST00000475255 ZFAND3Q9H8U3 227 aa10.49□□□□□ -0.73
SEMA4D-217ENST00000475255 CLPSL1A2RUU4 121 aa10.49□□□□□ -0.73
SEMA4D-217ENST00000475255 ZFP2Q6ZN57 461 aa10.49□□□□□ -0.73
SEMA4D-217ENST00000475255 LY6G5BQ8NDX9 201 aa10.49□□□□□ -0.73
SEMA4D-217ENST00000475255 PLEKHB2Q96CS7 222 aa10.49□□□□□ -0.73
SEMA4D-217ENST00000475255 LINC01546A6NGU7 62 aa10.49□□□□□ -0.73
SEMA4D-217ENST00000475255 HOXA3O43365 443 aaPredicted RBP10.49□□□□□ -0.73
SEMA4D-217ENST00000475255 CREBBPQ92793 2442 aa10.49□□□□□ -0.73
SEMA4D-217ENST00000475255 TRBV7-3A0A075B6L6 115 aa10.48□□□□□ -0.73
SEMA4D-217ENST00000475255 PRSS29PA6NIE9 313 aa10.48□□□□□ -0.73
SEMA4D-217ENST00000475255 C8orf86Q6ZUL3 223 aa10.48□□□□□ -0.73
SEMA4D-217ENST00000475255 SMPXQ9UHP9 88 aa10.48□□□□□ -0.73
SEMA4D-217ENST00000475255 RAXQ9Y2V3 346 aa10.48□□□□□ -0.73
SEMA4D-217ENST00000475255 TRAV26-1A0A087WT03 109 aa10.48□□□□□ -0.73
SEMA4D-217ENST00000475255 S100A4P26447 101 aaKnown RBP10.48□□□□□ -0.73
SEMA4D-217ENST00000475255 ZFP36P26651 326 aaKnown RBP10.48□□□□□ -0.73
SEMA4D-217ENST00000475255 SRSF1Q07955 248 aaKnown RBP eCLIP10.48□□□□□ -0.73
SEMA4D-217ENST00000475255 MORN3Q6PF18 240 aaPredicted RBP10.48□□□□□ -0.73
SEMA4D-217ENST00000475255 CCDC140Q96MF4 163 aa10.48□□□□□ -0.73
SEMA4D-217ENST00000475255 ARL3P36405 182 aa10.47□□□□□ -0.73
SEMA4D-217ENST00000475255 ZNF815PA8K554 130 aa10.47□□□□□ -0.73
SEMA4D-217ENST00000475255 ODF3BA8MYP8 253 aa10.47□□□□□ -0.73
SEMA4D-217ENST00000475255 H7C2G1 150 aa10.47□□□□□ -0.73
SEMA4D-217ENST00000475255 LGALS1P09382 135 aaKnown RBP10.47□□□□□ -0.73
SEMA4D-217ENST00000475255 PRTN3P24158 256 aa10.47□□□□□ -0.73
SEMA4D-217ENST00000475255 RPL11P62913 178 aaKnown RBP10.47□□□□□ -0.73
SEMA4D-217ENST00000475255 Q8N9W7 124 aa10.47□□□□□ -0.73
SEMA4D-217ENST00000475255 PRADC1Q9BSG0 188 aa10.47□□□□□ -0.73
SEMA4D-217ENST00000475255 SMIM2Q9BVW6 85 aa10.47□□□□□ -0.73
SEMA4D-217ENST00000475255 PRO0461Q9UI25 63 aa10.47□□□□□ -0.73
SEMA4D-217ENST00000475255 MYMXA0A1B0GTQ4 84 aa10.47□□□□□ -0.73
SEMA4D-217ENST00000475255 F6UB75 175 aa10.47□□□□□ -0.73
SEMA4D-217ENST00000475255 F8VRH5 84 aa10.47□□□□□ -0.73
SEMA4D-217ENST00000475255 SLC25A16P16260 332 aa10.47□□□□□ -0.73
SEMA4D-217ENST00000475255 ZNF48Q96MX3 618 aaPredicted RBP10.47□□□□□ -0.73
SEMA4D-217ENST00000475255 IGHV3OR16-10A0A075B7F0 116 aa10.46□□□□□ -0.73
SEMA4D-217ENST00000475255 C20orf173Q96LM9 149 aa10.46□□□□□ -0.73
SEMA4D-217ENST00000475255 H7C1H1 209 aa10.46□□□□□ -0.74
SEMA4D-217ENST00000475255 C16orf92Q96LL3 132 aa10.46□□□□□ -0.74
SEMA4D-217ENST00000475255 VPS13CQ709C8 3753 aa10.45□□□□□ -0.74
SEMA4D-217ENST00000475255 TMEM219Q86XT9 240 aa10.45□□□□□ -0.74
SEMA4D-217ENST00000475255 RASL10AQ92737 203 aa10.45□□□□□ -0.74
SEMA4D-217ENST00000475255 SMCPP49901 116 aaPredicted RBP10.45□□□□□ -0.74
SEMA4D-217ENST00000475255 DOPEY2Q9Y3R5 2298 aa10.45□□□□□ -0.74
SEMA4D-217ENST00000475255 SPINK8P0C7L1 97 aa10.44□□□□□ -0.74
SEMA4D-217ENST00000475255 PLNP26678 52 aa10.44□□□□□ -0.74
SEMA4D-217ENST00000475255 GNRH2O43555 120 aa10.44□□□□□ -0.74
SEMA4D-217ENST00000475255 MT-ATP8P03928 68 aa10.44□□□□□ -0.74
SEMA4D-217ENST00000475255 SCGB1C2P0DMR2 95 aa10.44□□□□□ -0.74
SEMA4D-217ENST00000475255 SUMO2P61956 95 aaKnown RBP10.44□□□□□ -0.74
SEMA4D-217ENST00000475255 C2orf66Q6UXQ4 117 aa10.44□□□□□ -0.74
SEMA4D-217ENST00000475255 Q8N6K4 173 aa10.44□□□□□ -0.74
SEMA4D-217ENST00000475255 TIMD4Q96H15 378 aa10.44□□□□□ -0.74
SEMA4D-217ENST00000475255 GEMIN7Q9H840 131 aaKnown RBP10.44□□□□□ -0.74
SEMA4D-217ENST00000475255 NFE4Q86UQ8 179 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms