RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 C11orf52Q96A22 123 aa8.47□□□□□ -1.05
CLIP2-204ENST00000474962 TVP23CQ96ET8 276 aa8.47□□□□□ -1.05
CLIP2-204ENST00000474962 C8orf49Q96NF6 230 aa8.47□□□□□ -1.05
CLIP2-204ENST00000474962 NAGKQ9UJ70 344 aa8.47□□□□□ -1.05
CLIP2-204ENST00000474962 IGHV1OR15-1A0A075B7D0 117 aa8.46□□□□□ -1.06
CLIP2-204ENST00000474962 TRAV10A0A0B4J240 114 aa8.46□□□□□ -1.06
CLIP2-204ENST00000474962 TRBV6-1A0A0K0K1D8 114 aa8.46□□□□□ -1.06
CLIP2-204ENST00000474962 ZNF324O75467 553 aaPredicted RBP8.46□□□□□ -1.06
CLIP2-204ENST00000474962 RPL35P42766 123 aaKnown RBP8.46□□□□□ -1.06
CLIP2-204ENST00000474962 PEA15Q15121 130 aa8.46□□□□□ -1.06
CLIP2-204ENST00000474962 PRR9Q5T870 116 aa8.46□□□□□ -1.06
CLIP2-204ENST00000474962 Q6AWC8 147 aa8.46□□□□□ -1.06
CLIP2-204ENST00000474962 ZNF493Q6ZR52 646 aa8.46□□□□□ -1.06
CLIP2-204ENST00000474962 C16orf74Q96GX8 76 aa8.46□□□□□ -1.06
CLIP2-204ENST00000474962 IGHV4-4A0A075B6R2 117 aa8.45□□□□□ -1.06
CLIP2-204ENST00000474962 DEFB131BA0A096LNP1 70 aa8.45□□□□□ -1.06
CLIP2-204ENST00000474962 FABP5P3A8MUU1 101 aa8.45□□□□□ -1.06
CLIP2-204ENST00000474962 SNURFLB1AK76 121 aa8.45□□□□□ -1.06
CLIP2-204ENST00000474962 TMEM250H0YL14 139 aa8.45□□□□□ -1.06
CLIP2-204ENST00000474962 LTAP01374 205 aa8.45□□□□□ -1.06
CLIP2-204ENST00000474962 PFN1P07737 140 aaKnown RBP8.45□□□□□ -1.06
CLIP2-204ENST00000474962 GNG4P50150 75 aa8.45□□□□□ -1.06
CLIP2-204ENST00000474962 ZNF674Q2M3X9 581 aa8.45□□□□□ -1.06
CLIP2-204ENST00000474962 MUC21Q5SSG8 566 aa8.45□□□□□ -1.06
CLIP2-204ENST00000474962 TMEM183AQ8IXX5 376 aa8.45□□□□□ -1.06
CLIP2-204ENST00000474962 TMEM263Q8WUH6 116 aaKnown RBP8.45□□□□□ -1.06
CLIP2-204ENST00000474962 KCNS1Q96KK3 526 aa8.45□□□□□ -1.06
CLIP2-204ENST00000474962 DNAH2Q9P225 4427 aa8.44□□□□□ -1.06
CLIP2-204ENST00000474962 TRGV11A0A075B6L2 103 aa8.44□□□□□ -1.06
CLIP2-204ENST00000474962 TEX48A0A1B0GUV7 120 aa8.44□□□□□ -1.06
CLIP2-204ENST00000474962 PRM2P04554 102 aa8.44□□□□□ -1.06
CLIP2-204ENST00000474962 SPART-AS1P0CW21 52 aa8.44□□□□□ -1.06
CLIP2-204ENST00000474962 CLLU1Q5K131 121 aa8.44□□□□□ -1.06
CLIP2-204ENST00000474962 FAM162BQ5T6X4 162 aa8.44□□□□□ -1.06
CLIP2-204ENST00000474962 NHLRC2Q8NBF2 726 aa8.44□□□□□ -1.06
CLIP2-204ENST00000474962 DERL1Q9BUN8 251 aa8.44□□□□□ -1.06
CLIP2-204ENST00000474962 SDF2L1Q9HCN8 221 aa8.44□□□□□ -1.06
CLIP2-204ENST00000474962 BIN3Q9NQY0 253 aa8.44□□□□□ -1.06
CLIP2-204ENST00000474962 RAB19A4D1S5 217 aa8.43□□□□□ -1.06
CLIP2-204ENST00000474962 EREGO14944 169 aa8.43□□□□□ -1.06
CLIP2-204ENST00000474962 NDUFS6O75380 124 aaKnown RBP8.43□□□□□ -1.06
CLIP2-204ENST00000474962 ORM1P02763 201 aa8.43□□□□□ -1.06
CLIP2-204ENST00000474962 MGST1P10620 155 aaKnown RBP8.43□□□□□ -1.06
CLIP2-204ENST00000474962 AZU1P20160 251 aa8.43□□□□□ -1.06
CLIP2-204ENST00000474962 IFITM2Q01629 132 aa8.43□□□□□ -1.06
CLIP2-204ENST00000474962 ANXA2RQ3ZCQ2 193 aa8.43□□□□□ -1.06
CLIP2-204ENST00000474962 CENPWQ5EE01 88 aa8.43□□□□□ -1.06
CLIP2-204ENST00000474962 DAZAP1Q96EP5 407 aaKnown RBP8.43□□□□□ -1.06
CLIP2-204ENST00000474962 ZC2HC1AQ96GY0 325 aa8.43□□□□□ -1.06
CLIP2-204ENST00000474962 LINC00467Q9BRT7 94 aa8.43□□□□□ -1.06
CLIP2-204ENST00000474962 SMDT1Q9H4I9 107 aa8.43□□□□□ -1.06
CLIP2-204ENST00000474962 TIMM8BQ9Y5J9 83 aaPredicted RBP8.43□□□□□ -1.06
CLIP2-204ENST00000474962 ZNF80P51504 273 aaPredicted RBP8.42□□□□□ -1.06
CLIP2-204ENST00000474962 ZNF415Q09FC8 603 aa8.42□□□□□ -1.06
CLIP2-204ENST00000474962 PRR27Q6MZM9 219 aa8.42□□□□□ -1.06
CLIP2-204ENST00000474962 Q6ZQT7 251 aa8.42□□□□□ -1.06
CLIP2-204ENST00000474962 SMIM12Q96EX1 92 aa8.42□□□□□ -1.06
CLIP2-204ENST00000474962 PARLQ9H300 379 aa8.42□□□□□ -1.06
CLIP2-204ENST00000474962 DNAH17Q9UFH2 4485 aa8.42□□□□□ -1.06
CLIP2-204ENST00000474962 HERC2O95714 4834 aa8.42□□□□□ -1.06
CLIP2-204ENST00000474962 FAT2Q9NYQ8 4349 aa8.41□□□□□ -1.06
CLIP2-204ENST00000474962 LYRM9A8MSI8 78 aa8.41□□□□□ -1.06
CLIP2-204ENST00000474962 ZNF727A8MUV8 499 aa8.41□□□□□ -1.06
CLIP2-204ENST00000474962 SH2D1AO60880 128 aa8.41□□□□□ -1.06
CLIP2-204ENST00000474962 SRP19P09132 144 aaKnown RBP8.41□□□□□ -1.06
CLIP2-204ENST00000474962 S100A4P26447 101 aaKnown RBP8.41□□□□□ -1.06
CLIP2-204ENST00000474962 OR5I1Q13606 314 aa8.41□□□□□ -1.06
CLIP2-204ENST00000474962 FAM222AQ5U5X8 452 aa8.41□□□□□ -1.06
CLIP2-204ENST00000474962 COX8CQ7Z4L0 72 aa8.41□□□□□ -1.06
CLIP2-204ENST00000474962 RNASE8Q8TDE3 154 aaKnown RBP8.41□□□□□ -1.06
CLIP2-204ENST00000474962 SMIM7Q9BQ49 75 aa8.41□□□□□ -1.06
CLIP2-204ENST00000474962 NOP10Q9NPE3 64 aaKnown RBP8.41□□□□□ -1.06
CLIP2-204ENST00000474962 GSN-AS1Q9NRJ2 163 aa8.41□□□□□ -1.06
CLIP2-204ENST00000474962 B4DEV8 164 aa8.4□□□□□ -1.06
CLIP2-204ENST00000474962 C9JCJ5 164 aa8.4□□□□□ -1.06
CLIP2-204ENST00000474962 GNRH2O43555 120 aa8.4□□□□□ -1.06
CLIP2-204ENST00000474962 DAD1P61803 113 aa8.4□□□□□ -1.06
CLIP2-204ENST00000474962 TDRG1Q3Y452 100 aa8.4□□□□□ -1.06
CLIP2-204ENST00000474962 IBA57Q5T440 356 aaKnown RBP8.4□□□□□ -1.06
CLIP2-204ENST00000474962 NDUFAF3Q9BU61 184 aa8.4□□□□□ -1.06
CLIP2-204ENST00000474962 MLST8Q9BVC4 326 aa8.4□□□□□ -1.06
CLIP2-204ENST00000474962 DKK2Q9UBU2 259 aa8.4□□□□□ -1.06
CLIP2-204ENST00000474962 TP53TG3Q9ULZ0 132 aa8.4□□□□□ -1.06
CLIP2-204ENST00000474962 PKHD1P08F94 4074 aa8.39□□□□□ -1.07
CLIP2-204ENST00000474962 M0R036 132 aa8.39□□□□□ -1.07
CLIP2-204ENST00000474962 TYMSP04818 313 aa8.39□□□□□ -1.07
CLIP2-204ENST00000474962 DEFB130BP0DP73 79 aa8.39□□□□□ -1.07
CLIP2-204ENST00000474962 DEFB130AP0DP74 79 aa8.39□□□□□ -1.07
CLIP2-204ENST00000474962 CRIP1P50238 77 aa8.39□□□□□ -1.07
CLIP2-204ENST00000474962 FAM74A3Q4VXF1 159 aa8.39□□□□□ -1.07
CLIP2-204ENST00000474962 POM121L12Q8N7R1 296 aa8.39□□□□□ -1.07
CLIP2-204ENST00000474962 SPXQ9BT56 116 aa8.39□□□□□ -1.07
CLIP2-204ENST00000474962 TMSB15BA0A087X1C1 80 aa8.38□□□□□ -1.07
CLIP2-204ENST00000474962 PGPEP1LA6NFU8 196 aa8.38□□□□□ -1.07
CLIP2-204ENST00000474962 M0R2N4 97 aa8.38□□□□□ -1.07
CLIP2-204ENST00000474962 HTN3P15516 51 aa8.38□□□□□ -1.07
CLIP2-204ENST00000474962 ASIPP42127 132 aa8.38□□□□□ -1.07
CLIP2-204ENST00000474962 TCL1AP56279 114 aa8.38□□□□□ -1.07
CLIP2-204ENST00000474962 SRSF3P84103 164 aaKnown RBP8.38□□□□□ -1.07
CLIP2-204ENST00000474962 DAZ2Q13117 558 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms