RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 NUP35Q8NFH5 326 aa4.89□□□□□ -1.63
ATG4A-207ENST00000474825 GTSF1Q8WW33 167 aa4.89□□□□□ -1.63
ATG4A-207ENST00000474825 DAZAP1Q96EP5 407 aaKnown RBP4.89□□□□□ -1.63
ATG4A-207ENST00000474825 FAM210BQ96KR6 192 aa4.89□□□□□ -1.63
ATG4A-207ENST00000474825 NEU1Q99519 415 aa4.89□□□□□ -1.63
ATG4A-207ENST00000474825 MCRIP2Q9BUT9 160 aaKnown RBP4.89□□□□□ -1.63
ATG4A-207ENST00000474825 KRTAP9-3Q9BYQ3 159 aa4.89□□□□□ -1.63
ATG4A-207ENST00000474825 SRD5A3Q9H8P0 318 aa4.89□□□□□ -1.63
ATG4A-207ENST00000474825 C11orf21Q9P2W6 132 aa4.89□□□□□ -1.63
ATG4A-207ENST00000474825 URGCP-MRPS24S4R325 110 aa4.89□□□□□ -1.63
ATG4A-207ENST00000474825 TRAV21A0A0B4J279 112 aa4.88□□□□□ -1.63
ATG4A-207ENST00000474825 IGKV3D-20A0A0C4DH25 116 aa4.88□□□□□ -1.63
ATG4A-207ENST00000474825 A0A1B0GXF2 115 aa4.88□□□□□ -1.63
ATG4A-207ENST00000474825 SAP30O75446 220 aa4.88□□□□□ -1.63
ATG4A-207ENST00000474825 CA1P00915 261 aaPredicted RBP4.88□□□□□ -1.63
ATG4A-207ENST00000474825 IGLC6P0CF74 106 aa4.88□□□□□ -1.63
ATG4A-207ENST00000474825 PRB4P10163 310 aaPredicted RBP4.88□□□□□ -1.63
ATG4A-207ENST00000474825 LEPP41159 167 aa4.88□□□□□ -1.63
ATG4A-207ENST00000474825 FAM3BP58499 235 aaPredicted RBP4.88□□□□□ -1.63
ATG4A-207ENST00000474825 TDRG1Q3Y452 100 aa4.88□□□□□ -1.63
ATG4A-207ENST00000474825 WDR73Q6P4I2 378 aa4.88□□□□□ -1.63
ATG4A-207ENST00000474825 ATP5L2Q7Z4Y8 100 aa4.88□□□□□ -1.63
ATG4A-207ENST00000474825 OR2D3Q8NGH3 330 aa4.88□□□□□ -1.63
ATG4A-207ENST00000474825 CNFNQ9BYD5 112 aa4.88□□□□□ -1.63
ATG4A-207ENST00000474825 NAT8BQ9UHF3 227 aa4.88□□□□□ -1.63
ATG4A-207ENST00000474825 TMA7Q9Y2S6 64 aaKnown RBP4.88□□□□□ -1.63
ATG4A-207ENST00000474825 A0A1W2PPQ1 181 aa4.87□□□□□ -1.63
ATG4A-207ENST00000474825 XKRY2A2RUG3 117 aa4.87□□□□□ -1.63
ATG4A-207ENST00000474825 TMEM189A5PLL7 270 aa4.87□□□□□ -1.63
ATG4A-207ENST00000474825 RBMY1BA6NDE4 496 aaKnown RBP4.87□□□□□ -1.63
ATG4A-207ENST00000474825 RBMY1EA6NEQ0 496 aaKnown RBP4.87□□□□□ -1.63
ATG4A-207ENST00000474825 HIGD1CA8MV81 97 aa4.87□□□□□ -1.63
ATG4A-207ENST00000474825 CRXO43186 299 aaPredicted RBP4.87□□□□□ -1.63
ATG4A-207ENST00000474825 RBMY1DP0C7P1 496 aaKnown RBP4.87□□□□□ -1.63
ATG4A-207ENST00000474825 MED14OSP0DP75 135 aa4.87□□□□□ -1.63
ATG4A-207ENST00000474825 TSPOP30536 169 aa4.87□□□□□ -1.63
ATG4A-207ENST00000474825 CTRLP40313 264 aa4.87□□□□□ -1.63
ATG4A-207ENST00000474825 CDKN1BP46527 198 aa4.87□□□□□ -1.63
ATG4A-207ENST00000474825 COX19Q49B96 90 aa4.87□□□□□ -1.63
ATG4A-207ENST00000474825 TRPT1Q86TN4 253 aaKnown RBP4.87□□□□□ -1.63
ATG4A-207ENST00000474825 C20orf144Q9BQM9 153 aa4.87□□□□□ -1.63
ATG4A-207ENST00000474825 LINC00467Q9BRT7 94 aa4.87□□□□□ -1.63
ATG4A-207ENST00000474825 GNB1LQ9BYB4 327 aa4.87□□□□□ -1.63
ATG4A-207ENST00000474825 TP53TG3Q9ULZ0 132 aa4.87□□□□□ -1.63
ATG4A-207ENST00000474825 FBN3Q75N90 2809 aa4.87□□□□□ -1.63
ATG4A-207ENST00000474825 IGHV4-4A0A075B6R2 117 aa4.86□□□□□ -1.63
ATG4A-207ENST00000474825 A0A1B0GW15 77 aa4.86□□□□□ -1.63
ATG4A-207ENST00000474825 C7orf71A4D174 169 aa4.86□□□□□ -1.63
ATG4A-207ENST00000474825 KNCNA6PVL3 124 aa4.86□□□□□ -1.63
ATG4A-207ENST00000474825 OR11H12B2RN74 326 aa4.86□□□□□ -1.63
ATG4A-207ENST00000474825 F2Z2F3 143 aa4.86□□□□□ -1.63
ATG4A-207ENST00000474825 SNAI2O43623 268 aa4.86□□□□□ -1.63
ATG4A-207ENST00000474825 AMBPP02760 352 aa4.86□□□□□ -1.63
ATG4A-207ENST00000474825 GPX1P07203 203 aa4.86□□□□□ -1.63
ATG4A-207ENST00000474825 RPL19P84098 196 aaKnown RBP4.86□□□□□ -1.63
ATG4A-207ENST00000474825 KIR3DS1Q14943 382 aa4.86□□□□□ -1.63
ATG4A-207ENST00000474825 ACTL10Q5JWF8 245 aa4.86□□□□□ -1.63
ATG4A-207ENST00000474825 GFI1BQ5VTD9 330 aa4.86□□□□□ -1.63
ATG4A-207ENST00000474825 SCRT2Q9NQ03 307 aa4.86□□□□□ -1.63
ATG4A-207ENST00000474825 LOC105371267A0A1B0GV96 52 aa4.85□□□□□ -1.63
ATG4A-207ENST00000474825 ORM1P02763 201 aa4.85□□□□□ -1.63
ATG4A-207ENST00000474825 MT-ND6P03923 174 aa4.85□□□□□ -1.63
ATG4A-207ENST00000474825 CD7P09564 240 aa4.85□□□□□ -1.63
ATG4A-207ENST00000474825 OR5AL1P0C617 328 aa4.85□□□□□ -1.63
ATG4A-207ENST00000474825 FRMD6-AS1P0C7T7 363 aa4.85□□□□□ -1.63
ATG4A-207ENST00000474825 GZMBP10144 247 aa4.85□□□□□ -1.63
ATG4A-207ENST00000474825 Q6ZQT7 251 aa4.85□□□□□ -1.63
ATG4A-207ENST00000474825 ZNF493Q6ZR52 646 aa4.85□□□□□ -1.63
ATG4A-207ENST00000474825 TMEM136Q6ZRR5 245 aa4.85□□□□□ -1.63
ATG4A-207ENST00000474825 Q8N1Y9 231 aa4.85□□□□□ -1.63
ATG4A-207ENST00000474825 KCNS1Q96KK3 526 aa4.85□□□□□ -1.63
ATG4A-207ENST00000474825 SORL1Q92673 2214 aa4.85□□□□□ -1.63
ATG4A-207ENST00000474825 A0A1B0GUT8 65 aa4.84□□□□□ -1.63
ATG4A-207ENST00000474825 M0R2Z0 102 aa4.84□□□□□ -1.63
ATG4A-207ENST00000474825 NXPH4O95158 308 aa4.84□□□□□ -1.63
ATG4A-207ENST00000474825 TRGC2P03986 189 aa4.84□□□□□ -1.63
ATG4A-207ENST00000474825 GIG44P09565 113 aaPredicted RBP4.84□□□□□ -1.63
ATG4A-207ENST00000474825 RBMY1A1P0DJD3 496 aaKnown RBP4.84□□□□□ -1.63
ATG4A-207ENST00000474825 RBMY1CP0DJD4 496 aa4.84□□□□□ -1.63
ATG4A-207ENST00000474825 RNASE4P34096 147 aaKnown RBP4.84□□□□□ -1.63
ATG4A-207ENST00000474825 RPS10P46783 165 aaKnown RBP4.84□□□□□ -1.63
ATG4A-207ENST00000474825 TCL1AP56279 114 aa4.84□□□□□ -1.63
ATG4A-207ENST00000474825 EGFEM1PQ0D2K5 195 aa4.84□□□□□ -1.63
ATG4A-207ENST00000474825 RBMY1FQ15415 496 aaKnown RBP4.84□□□□□ -1.63
ATG4A-207ENST00000474825 ANXA2RQ3ZCQ2 193 aa4.84□□□□□ -1.63
ATG4A-207ENST00000474825 LYZL1Q6UWQ5 148 aa4.84□□□□□ -1.63
ATG4A-207ENST00000474825 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.84□□□□□ -1.63
ATG4A-207ENST00000474825 FER1L6-AS1Q8NA97 138 aa4.84□□□□□ -1.63
ATG4A-207ENST00000474825 PTH2Q96A98 100 aa4.84□□□□□ -1.63
ATG4A-207ENST00000474825 PGLYRP4Q96LB8 373 aa4.84□□□□□ -1.63
ATG4A-207ENST00000474825 IGHV1OR15-1A0A075B7D0 117 aa4.83□□□□□ -1.64
ATG4A-207ENST00000474825 TRAV12-3A0A0B4J271 114 aa4.83□□□□□ -1.64
ATG4A-207ENST00000474825 C1orf196B1AJZ1 125 aa4.83□□□□□ -1.64
ATG4A-207ENST00000474825 HLA-DQA1P01909 254 aa4.83□□□□□ -1.64
ATG4A-207ENST00000474825 S100A8P05109 93 aa4.83□□□□□ -1.64
ATG4A-207ENST00000474825 ARMS2P0C7Q2 107 aa4.83□□□□□ -1.64
ATG4A-207ENST00000474825 RNASE3P12724 160 aaKnown RBP4.83□□□□□ -1.64
ATG4A-207ENST00000474825 IGLL1P15814 213 aa4.83□□□□□ -1.64
ATG4A-207ENST00000474825 HBBP68871 147 aa4.83□□□□□ -1.64
ATG4A-207ENST00000474825 RIGQ13278 110 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms