RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 NAT8BQ9UHF3 227 aa7.62□□□□□ -1.19
COL12A1-206ENST00000474564 NAGKQ9UJ70 344 aa7.62□□□□□ -1.19
COL12A1-206ENST00000474564 TRAV12-2A0A075B6T6 113 aa7.61□□□□□ -1.19
COL12A1-206ENST00000474564 TMSB15BA0A087X1C1 80 aa7.61□□□□□ -1.19
COL12A1-206ENST00000474564 COLCA2A8K830 154 aa7.61□□□□□ -1.19
COL12A1-206ENST00000474564 SPINK4O60575 86 aa7.61□□□□□ -1.19
COL12A1-206ENST00000474564 CXCL1P09341 107 aa7.61□□□□□ -1.19
COL12A1-206ENST00000474564 S100A4P26447 101 aaKnown RBP7.61□□□□□ -1.19
COL12A1-206ENST00000474564 COX19Q49B96 90 aa7.61□□□□□ -1.19
COL12A1-206ENST00000474564 CT83Q5H943 113 aa7.61□□□□□ -1.19
COL12A1-206ENST00000474564 GFI1BQ5VTD9 330 aa7.61□□□□□ -1.19
COL12A1-206ENST00000474564 TSKUQ8WUA8 353 aa7.61□□□□□ -1.19
COL12A1-206ENST00000474564 FRZBQ92765 325 aa7.61□□□□□ -1.19
COL12A1-206ENST00000474564 TRGV11A0A075B6L2 103 aa7.6□□□□□ -1.19
COL12A1-206ENST00000474564 TRBV24-1A0A075B6N3 115 aa7.6□□□□□ -1.19
COL12A1-206ENST00000474564 IGHV3OR16-12A0A075B7B8 117 aa7.6□□□□□ -1.19
COL12A1-206ENST00000474564 IGHV1OR15-1A0A075B7D0 117 aa7.6□□□□□ -1.19
COL12A1-206ENST00000474564 CBY3A6NI87 242 aa7.6□□□□□ -1.19
COL12A1-206ENST00000474564 S100A6P06703 90 aa7.6□□□□□ -1.19
COL12A1-206ENST00000474564 HTN1P15515 57 aa7.6□□□□□ -1.19
COL12A1-206ENST00000474564 MRPL54Q6P161 138 aaKnown RBP7.6□□□□□ -1.19
COL12A1-206ENST00000474564 WDR73Q6P4I2 378 aa7.6□□□□□ -1.19
COL12A1-206ENST00000474564 RCHY1Q96PM5 261 aa7.6□□□□□ -1.19
COL12A1-206ENST00000474564 COL6A5A8TX70 2615 aa7.59□□□□□ -1.19
COL12A1-206ENST00000474564 C19orf71A6NCJ1 209 aa7.59□□□□□ -1.19
COL12A1-206ENST00000474564 SMIM9A6NGZ8 99 aa7.59□□□□□ -1.19
COL12A1-206ENST00000474564 S100A8P05109 93 aa7.59□□□□□ -1.19
COL12A1-206ENST00000474564 ASIPP42127 132 aa7.59□□□□□ -1.19
COL12A1-206ENST00000474564 Q6ZWC4 215 aa7.59□□□□□ -1.19
COL12A1-206ENST00000474564 PGLYRP4Q96LB8 373 aa7.59□□□□□ -1.19
COL12A1-206ENST00000474564 NEU1Q99519 415 aa7.59□□□□□ -1.19
COL12A1-206ENST00000474564 GFRA4Q9GZZ7 299 aa7.59□□□□□ -1.19
COL12A1-206ENST00000474564 TRAPPC1Q9Y5R8 145 aa7.59□□□□□ -1.19
COL12A1-206ENST00000474564 SMIM27A0A1W2PRY6 76 aa7.58□□□□□ -1.2
COL12A1-206ENST00000474564 FAM231BA6NCW3 169 aa7.58□□□□□ -1.2
COL12A1-206ENST00000474564 RBMY1BA6NDE4 496 aaKnown RBP7.58□□□□□ -1.2
COL12A1-206ENST00000474564 RBMY1EA6NEQ0 496 aaKnown RBP7.58□□□□□ -1.2
COL12A1-206ENST00000474564 HIGD1CA8MV81 97 aa7.58□□□□□ -1.2
COL12A1-206ENST00000474564 F2Z2F3 143 aa7.58□□□□□ -1.2
COL12A1-206ENST00000474564 ZNF324O75467 553 aaPredicted RBP7.58□□□□□ -1.2
COL12A1-206ENST00000474564 RBMY1DP0C7P1 496 aaKnown RBP7.58□□□□□ -1.2
COL12A1-206ENST00000474564 CRIP1P50238 77 aa7.58□□□□□ -1.2
COL12A1-206ENST00000474564 ZNF80P51504 273 aaPredicted RBP7.58□□□□□ -1.2
COL12A1-206ENST00000474564 RIGQ13278 110 aa7.58□□□□□ -1.2
COL12A1-206ENST00000474564 RRN3P1Q2M238 152 aa7.58□□□□□ -1.2
COL12A1-206ENST00000474564 LINC01559Q495D7 138 aa7.58□□□□□ -1.2
COL12A1-206ENST00000474564 MUC21Q5SSG8 566 aa7.58□□□□□ -1.2
COL12A1-206ENST00000474564 LINC00322Q6ZN03 302 aaPredicted RBP7.58□□□□□ -1.2
COL12A1-206ENST00000474564 ZNF493Q6ZR52 646 aa7.58□□□□□ -1.2
COL12A1-206ENST00000474564 ZFP82Q8N141 532 aa7.58□□□□□ -1.2
COL12A1-206ENST00000474564 LINC00467Q9BRT7 94 aa7.58□□□□□ -1.2
COL12A1-206ENST00000474564 SNURFLB1AK76 121 aa7.57□□□□□ -1.2
COL12A1-206ENST00000474564 CRXO43186 299 aaPredicted RBP7.57□□□□□ -1.2
COL12A1-206ENST00000474564 SPRY2O43597 315 aa7.57□□□□□ -1.2
COL12A1-206ENST00000474564 MT-ND6P03923 174 aa7.57□□□□□ -1.2
COL12A1-206ENST00000474564 FRMD6-AS1P0C7T7 363 aa7.57□□□□□ -1.2
COL12A1-206ENST00000474564 GZMBP10144 247 aa7.57□□□□□ -1.2
COL12A1-206ENST00000474564 ZNF415Q09FC8 603 aa7.57□□□□□ -1.2
COL12A1-206ENST00000474564 ANXA2RQ3ZCQ2 193 aa7.57□□□□□ -1.2
COL12A1-206ENST00000474564 MRAPQ8TCY5 172 aa7.57□□□□□ -1.2
COL12A1-206ENST00000474564 TIMM8BQ9Y5J9 83 aaPredicted RBP7.57□□□□□ -1.2
COL12A1-206ENST00000474564 GRIFINA4D1Z8 144 aa7.56□□□□□ -1.2
COL12A1-206ENST00000474564 HLA-DQA1P01909 254 aa7.56□□□□□ -1.2
COL12A1-206ENST00000474564 CAMPP49913 170 aa7.56□□□□□ -1.2
COL12A1-206ENST00000474564 HBBP68871 147 aa7.56□□□□□ -1.2
COL12A1-206ENST00000474564 FABP9Q0Z7S8 132 aa7.56□□□□□ -1.2
COL12A1-206ENST00000474564 TDRG1Q3Y452 100 aa7.56□□□□□ -1.2
COL12A1-206ENST00000474564 PRR9Q5T870 116 aa7.56□□□□□ -1.2
COL12A1-206ENST00000474564 SMIM15Q7Z3B0 74 aa7.56□□□□□ -1.2
COL12A1-206ENST00000474564 ATP5L2Q7Z4Y8 100 aa7.56□□□□□ -1.2
COL12A1-206ENST00000474564 FER1L6-AS1Q8NA97 138 aa7.56□□□□□ -1.2
COL12A1-206ENST00000474564 SYT8Q8NBV8 401 aa7.56□□□□□ -1.2
COL12A1-206ENST00000474564 NUP35Q8NFH5 326 aa7.56□□□□□ -1.2
COL12A1-206ENST00000474564 C16orf74Q96GX8 76 aa7.56□□□□□ -1.2
COL12A1-206ENST00000474564 YPEL4Q96NS1 127 aa7.56□□□□□ -1.2
COL12A1-206ENST00000474564 SPXQ9BT56 116 aa7.56□□□□□ -1.2
COL12A1-206ENST00000474564 ZMAT4Q9H898 229 aa7.56□□□□□ -1.2
COL12A1-206ENST00000474564 TP53TG1Q9Y2A0 90 aa7.56□□□□□ -1.2
COL12A1-206ENST00000474564 PHLDA3Q9Y5J5 127 aa7.56□□□□□ -1.2
COL12A1-206ENST00000474564 TRGC2P03986 189 aa7.55□□□□□ -1.2
COL12A1-206ENST00000474564 TYMSP04818 313 aa7.55□□□□□ -1.2
COL12A1-206ENST00000474564 SSTP61278 116 aa7.55□□□□□ -1.2
COL12A1-206ENST00000474564 CACNG7P62955 275 aa7.55□□□□□ -1.2
COL12A1-206ENST00000474564 KIR3DS1Q14943 382 aa7.55□□□□□ -1.2
COL12A1-206ENST00000474564 DEFB135Q30KP9 77 aa7.55□□□□□ -1.2
COL12A1-206ENST00000474564 RASL11AQ6T310 242 aa7.55□□□□□ -1.2
COL12A1-206ENST00000474564 OR11H2Q8NH07 326 aa7.55□□□□□ -1.2
COL12A1-206ENST00000474564 MRPL18Q9H0U6 180 aaKnown RBP7.55□□□□□ -1.2
COL12A1-206ENST00000474564 TENM1Q9UKZ4 2725 aa7.55□□□□□ -1.2
COL12A1-206ENST00000474564 SORL1Q92673 2214 aa7.55□□□□□ -1.2
COL12A1-206ENST00000474564 IGKV3D-20A0A0C4DH25 116 aa7.54□□□□□ -1.2
COL12A1-206ENST00000474564 A0A1B0GUT8 65 aa7.54□□□□□ -1.2
COL12A1-206ENST00000474564 A0A1B0GW15 77 aa7.54□□□□□ -1.2
COL12A1-206ENST00000474564 K7EIL1 84 aa7.54□□□□□ -1.2
COL12A1-206ENST00000474564 PRB2P02812 416 aaPredicted RBP7.54□□□□□ -1.2
COL12A1-206ENST00000474564 MED14OSP0DP75 135 aa7.54□□□□□ -1.2
COL12A1-206ENST00000474564 MIFP14174 115 aa7.54□□□□□ -1.2
COL12A1-206ENST00000474564 DNLZQ5SXM8 178 aa7.54□□□□□ -1.2
COL12A1-206ENST00000474564 SPANXN1Q5VSR9 72 aa7.54□□□□□ -1.2
COL12A1-206ENST00000474564 ZNF705AQ6ZN79 300 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms