RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 CTSGP08311 255 aa14.27□□□□□ -0.12
ECHDC1-214ENST00000474289 ZFAND6Q6FIF0 208 aa14.27□□□□□ -0.12
ECHDC1-214ENST00000474289 NDUFA11Q86Y39 141 aa14.27□□□□□ -0.12
ECHDC1-214ENST00000474289 SBSPONQ8IVN8 264 aa14.27□□□□□ -0.12
ECHDC1-214ENST00000474289 DEFB123Q8N688 67 aa14.27□□□□□ -0.12
ECHDC1-214ENST00000474289 BAALCQ8WXS3 180 aa14.27□□□□□ -0.12
ECHDC1-214ENST00000474289 ONECUT1Q9UBC0 465 aa14.27□□□□□ -0.12
ECHDC1-214ENST00000474289 A8MWV9 139 aa14.27□□□□□ -0.13
ECHDC1-214ENST00000474289 GAGE5Q13069 117 aa14.27□□□□□ -0.13
ECHDC1-214ENST00000474289 GAGE6Q13070 117 aa14.27□□□□□ -0.13
ECHDC1-214ENST00000474289 ORMDL2Q53FV1 153 aa14.27□□□□□ -0.13
ECHDC1-214ENST00000474289 Q6ZQT7 251 aa14.27□□□□□ -0.13
ECHDC1-214ENST00000474289 ANKRD29Q8N6D5 301 aa14.27□□□□□ -0.13
ECHDC1-214ENST00000474289 KLHL30-AS1Q8NEE0 82 aa14.27□□□□□ -0.13
ECHDC1-214ENST00000474289 AGPAT4-IT1Q9H0P7 198 aa14.26□□□□□ -0.13
ECHDC1-214ENST00000474289 RBAKDNA6NC62 111 aa14.26□□□□□ -0.13
ECHDC1-214ENST00000474289 H3BVH4 76 aa14.26□□□□□ -0.13
ECHDC1-214ENST00000474289 TGFAP01135 160 aa14.26□□□□□ -0.13
ECHDC1-214ENST00000474289 ATMQ13315 3056 aa14.26□□□□□ -0.13
ECHDC1-214ENST00000474289 NDPQ00604 133 aa14.25□□□□□ -0.13
ECHDC1-214ENST00000474289 TEX29Q8N6K0 151 aa14.25□□□□□ -0.13
ECHDC1-214ENST00000474289 DYNLRB1Q9NP97 96 aa14.25□□□□□ -0.13
ECHDC1-214ENST00000474289 TRBV20-1A0A075B6N2 111 aa14.25□□□□□ -0.13
ECHDC1-214ENST00000474289 IGHV4-4A0A075B6R2 117 aa14.25□□□□□ -0.13
ECHDC1-214ENST00000474289 FAM90A27PA6NNH2 459 aa14.25□□□□□ -0.13
ECHDC1-214ENST00000474289 SUMO2P61956 95 aaKnown RBP14.24□□□□□ -0.13
ECHDC1-214ENST00000474289 NPBQ8NG41 125 aa14.24□□□□□ -0.13
ECHDC1-214ENST00000474289 CITED1Q99966 193 aa14.24□□□□□ -0.13
ECHDC1-214ENST00000474289 SLC50A1Q9BRV3 221 aa14.24□□□□□ -0.13
ECHDC1-214ENST00000474289 CNOT1A5YKK6 2376 aaKnown RBP14.24□□□□□ -0.13
ECHDC1-214ENST00000474289 EP300Q09472 2414 aaPredicted RBP14.24□□□□□ -0.13
ECHDC1-214ENST00000474289 A0A0G2JNJ9 132 aa14.24□□□□□ -0.13
ECHDC1-214ENST00000474289 B5MCH6 92 aa14.24□□□□□ -0.13
ECHDC1-214ENST00000474289 Q9UFV3 132 aa14.24□□□□□ -0.13
ECHDC1-214ENST00000474289 NHLRC4P0CG21 123 aaPredicted RBP14.23□□□□□ -0.13
ECHDC1-214ENST00000474289 C2orf66Q6UXQ4 117 aa14.23□□□□□ -0.13
ECHDC1-214ENST00000474289 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.23□□□□□ -0.13
ECHDC1-214ENST00000474289 MSRB2Q9Y3D2 182 aa14.23□□□□□ -0.13
ECHDC1-214ENST00000474289 BSNQ9UPA5 3926 aa14.23□□□□□ -0.13
ECHDC1-214ENST00000474289 A0A0J9YY99 117 aa14.22□□□□□ -0.13
ECHDC1-214ENST00000474289 TMEM262E9PQX1 116 aa14.22□□□□□ -0.13
ECHDC1-214ENST00000474289 HES1Q14469 280 aa14.22□□□□□ -0.13
ECHDC1-214ENST00000474289 FAM57AQ8TBR7 257 aa14.22□□□□□ -0.13
ECHDC1-214ENST00000474289 CFC1BP0CG36 223 aa14.22□□□□□ -0.13
ECHDC1-214ENST00000474289 CFC1P0CG37 223 aa14.22□□□□□ -0.13
ECHDC1-214ENST00000474289 IGFL3Q6UXB1 125 aa14.22□□□□□ -0.13
ECHDC1-214ENST00000474289 PIP4P1Q86T03 277 aa14.22□□□□□ -0.13
ECHDC1-214ENST00000474289 RPL39LQ96EH5 51 aaKnown RBP14.22□□□□□ -0.13
ECHDC1-214ENST00000474289 ARHGAP32A7KAX9 2087 aa14.21□□□□□ -0.13
ECHDC1-214ENST00000474289 LYNX1G3V0Z9 82 aa14.21□□□□□ -0.13
ECHDC1-214ENST00000474289 LYNX1P0DP58 116 aa14.21□□□□□ -0.13
ECHDC1-214ENST00000474289 IGHV3-66A0A0C4DH42 116 aa14.21□□□□□ -0.14
ECHDC1-214ENST00000474289 BUB3O43684 328 aa14.21□□□□□ -0.14
ECHDC1-214ENST00000474289 SRD5A1P18405 259 aa14.21□□□□□ -0.14
ECHDC1-214ENST00000474289 C10orf126Q8N4M7 172 aa14.21□□□□□ -0.14
ECHDC1-214ENST00000474289 Q6ZS46 218 aa14.2□□□□□ -0.14
ECHDC1-214ENST00000474289 SCGB2A1O75556 95 aa14.2□□□□□ -0.14
ECHDC1-214ENST00000474289 AJUBAQ96IF1 538 aa14.2□□□□□ -0.14
ECHDC1-214ENST00000474289 IGHV3-30P01768 117 aa14.19□□□□□ -0.14
ECHDC1-214ENST00000474289 IGHV3-30-5P0DP03 117 aa14.19□□□□□ -0.14
ECHDC1-214ENST00000474289 DPM3Q9P2X0 92 aa14.19□□□□□ -0.14
ECHDC1-214ENST00000474289 SVEP1Q4LDE5 3571 aa14.19□□□□□ -0.14
ECHDC1-214ENST00000474289 C11orf86A6NJI1 115 aa14.19□□□□□ -0.14
ECHDC1-214ENST00000474289 RNF223E7ERA6 249 aa14.19□□□□□ -0.14
ECHDC1-214ENST00000474289 SPRY2O43597 315 aa14.19□□□□□ -0.14
ECHDC1-214ENST00000474289 CRYGDP07320 174 aa14.19□□□□□ -0.14
ECHDC1-214ENST00000474289 SCGB1C2P0DMR2 95 aa14.19□□□□□ -0.14
ECHDC1-214ENST00000474289 IGHV3OR16-13A0A075B7E8 117 aa14.17□□□□□ -0.14
ECHDC1-214ENST00000474289 IGHV3-74A0A0B4J1X5 117 aa14.17□□□□□ -0.14
ECHDC1-214ENST00000474289 TRAV8-2A0A0B4J237 113 aa14.17□□□□□ -0.14
ECHDC1-214ENST00000474289 RHODO00212 210 aa14.17□□□□□ -0.14
ECHDC1-214ENST00000474289 SLC25A20O43772 301 aa14.17□□□□□ -0.14
ECHDC1-214ENST00000474289 EMP1P54849 157 aa14.17□□□□□ -0.14
ECHDC1-214ENST00000474289 ZFAND3Q9H8U3 227 aa14.17□□□□□ -0.14
ECHDC1-214ENST00000474289 IGLV4-69A0A075B6H9 119 aa14.17□□□□□ -0.14
ECHDC1-214ENST00000474289 E7EQL1 145 aa14.17□□□□□ -0.14
ECHDC1-214ENST00000474289 M0R381 172 aa14.17□□□□□ -0.14
ECHDC1-214ENST00000474289 PRTN3P24158 256 aa14.17□□□□□ -0.14
ECHDC1-214ENST00000474289 CACNA1HO95180 2353 aa14.17□□□□□ -0.14
ECHDC1-214ENST00000474289 CRIP2P52943 208 aaPredicted RBP14.16□□□□□ -0.14
ECHDC1-214ENST00000474289 PRR9Q5T870 116 aa14.16□□□□□ -0.14
ECHDC1-214ENST00000474289 PRO1854Q9UHT4 67 aa14.16□□□□□ -0.14
ECHDC1-214ENST00000474289 AKAP13Q12802 2813 aa14.16□□□□□ -0.14
ECHDC1-214ENST00000474289 DUSP14O95147 198 aaKnown RBP14.16□□□□□ -0.14
ECHDC1-214ENST00000474289 ANXA2RQ3ZCQ2 193 aa14.16□□□□□ -0.14
ECHDC1-214ENST00000474289 DCHS2Q6V1P9 2916 aa14.16□□□□□ -0.14
ECHDC1-214ENST00000474289 CACNA1BQ00975 2339 aa14.15□□□□□ -0.14
ECHDC1-214ENST00000474289 C9JAW5 83 aa14.15□□□□□ -0.14
ECHDC1-214ENST00000474289 NDUFV3P56181 108 aaKnown RBP14.15□□□□□ -0.14
ECHDC1-214ENST00000474289 TSPEAR-AS2P59090 65 aa14.15□□□□□ -0.14
ECHDC1-214ENST00000474289 C14orf178Q8N769 122 aaPredicted RBP14.15□□□□□ -0.14
ECHDC1-214ENST00000474289 TRAV4A0A0B4J268 109 aa14.15□□□□□ -0.14
ECHDC1-214ENST00000474289 GAGE2BQ13066 116 aa14.15□□□□□ -0.14
ECHDC1-214ENST00000474289 GAGE2EQ4V326 116 aa14.15□□□□□ -0.14
ECHDC1-214ENST00000474289 SLC25A29Q8N8R3 303 aa14.15□□□□□ -0.14
ECHDC1-214ENST00000474289 GAGE2DQ9UEU5 116 aa14.15□□□□□ -0.14
ECHDC1-214ENST00000474289 LRBAP50851 2863 aa14.14□□□□□ -0.15
ECHDC1-214ENST00000474289 TSHBP01222 138 aa14.14□□□□□ -0.15
ECHDC1-214ENST00000474289 HERVK_113P61574 105 aa14.14□□□□□ -0.15
ECHDC1-214ENST00000474289 C9orf47Q6ZRZ4 202 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms