RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 LTAP01374 205 aa13.22□□□□□ -0.29
CCDC171-206ENST00000474193 PRM2P04554 102 aa13.22□□□□□ -0.29
CCDC171-206ENST00000474193 AZU1P20160 251 aa13.22□□□□□ -0.29
CCDC171-206ENST00000474193 RPL35P42766 123 aaKnown RBP13.22□□□□□ -0.29
CCDC171-206ENST00000474193 PRR9Q5T870 116 aa13.22□□□□□ -0.29
CCDC171-206ENST00000474193 Q6AWC8 147 aa13.22□□□□□ -0.29
CCDC171-206ENST00000474193 BAGE2Q86Y30 109 aa13.22□□□□□ -0.29
CCDC171-206ENST00000474193 TMEM250H0YL14 139 aa13.21□□□□□ -0.29
CCDC171-206ENST00000474193 ATP5G1P05496 136 aa13.21□□□□□ -0.29
CCDC171-206ENST00000474193 PEA15Q15121 130 aa13.21□□□□□ -0.29
CCDC171-206ENST00000474193 FAM159AQ6UWV7 190 aa13.21□□□□□ -0.29
CCDC171-206ENST00000474193 TMEM263Q8WUH6 116 aaKnown RBP13.21□□□□□ -0.29
CCDC171-206ENST00000474193 IGHV1OR15-1A0A075B7D0 117 aa13.2□□□□□ -0.3
CCDC171-206ENST00000474193 CBY3A6NI87 242 aa13.2□□□□□ -0.3
CCDC171-206ENST00000474193 SNURFLB1AK76 121 aa13.2□□□□□ -0.3
CCDC171-206ENST00000474193 CEBPGP53567 150 aa13.2□□□□□ -0.3
CCDC171-206ENST00000474193 IFITM2Q01629 132 aa13.2□□□□□ -0.3
CCDC171-206ENST00000474193 TMEM183AQ8IXX5 376 aa13.2□□□□□ -0.3
CCDC171-206ENST00000474193 C15orf53Q8NAA6 179 aa13.2□□□□□ -0.3
CCDC171-206ENST00000474193 NAGKQ9UJ70 344 aa13.2□□□□□ -0.3
CCDC171-206ENST00000474193 F5H768 121 aa13.19□□□□□ -0.3
CCDC171-206ENST00000474193 NDUFS6O75380 124 aaKnown RBP13.19□□□□□ -0.3
CCDC171-206ENST00000474193 PFN1P07737 140 aaKnown RBP13.19□□□□□ -0.3
CCDC171-206ENST00000474193 GNG4P50150 75 aa13.19□□□□□ -0.3
CCDC171-206ENST00000474193 CLLU1Q5K131 121 aa13.19□□□□□ -0.3
CCDC171-206ENST00000474193 EIF4E3Q8N5X7 224 aaKnown RBP13.19□□□□□ -0.3
CCDC171-206ENST00000474193 LINC00467Q9BRT7 94 aa13.19□□□□□ -0.3
CCDC171-206ENST00000474193 DERL1Q9BUN8 251 aa13.19□□□□□ -0.3
CCDC171-206ENST00000474193 FABP5P3A8MUU1 101 aa13.18□□□□□ -0.3
CCDC171-206ENST00000474193 ZNF674Q2M3X9 581 aa13.18□□□□□ -0.3
CCDC171-206ENST00000474193 MUC21Q5SSG8 566 aa13.18□□□□□ -0.3
CCDC171-206ENST00000474193 TMEM88Q6PEY1 159 aa13.18□□□□□ -0.3
CCDC171-206ENST00000474193 KCNS1Q96KK3 526 aa13.18□□□□□ -0.3
CCDC171-206ENST00000474193 SMDT1Q9H4I9 107 aa13.18□□□□□ -0.3
CCDC171-206ENST00000474193 NOP10Q9NPE3 64 aaKnown RBP13.18□□□□□ -0.3
CCDC171-206ENST00000474193 RNF212Q495C1 297 aa13.17□□□□□ -0.3
CCDC171-206ENST00000474193 CENPWQ5EE01 88 aa13.17□□□□□ -0.3
CCDC171-206ENST00000474193 FAM162BQ5T6X4 162 aa13.17□□□□□ -0.3
CCDC171-206ENST00000474193 NHLRC2Q8NBF2 726 aa13.17□□□□□ -0.3
CCDC171-206ENST00000474193 RAB19A4D1S5 217 aa13.16□□□□□ -0.3
CCDC171-206ENST00000474193 ZNF80P51504 273 aaPredicted RBP13.16□□□□□ -0.3
CCDC171-206ENST00000474193 ANXA2RQ3ZCQ2 193 aa13.16□□□□□ -0.3
CCDC171-206ENST00000474193 COX8CQ7Z4L0 72 aa13.16□□□□□ -0.3
CCDC171-206ENST00000474193 RNASE8Q8TDE3 154 aaKnown RBP13.16□□□□□ -0.3
CCDC171-206ENST00000474193 SMIM12Q96EX1 92 aa13.16□□□□□ -0.3
CCDC171-206ENST00000474193 ZC2HC1AQ96GY0 325 aa13.16□□□□□ -0.3
CCDC171-206ENST00000474193 SDF2L1Q9HCN8 221 aa13.16□□□□□ -0.3
CCDC171-206ENST00000474193 TRGV11A0A075B6L2 103 aa13.15□□□□□ -0.3
CCDC171-206ENST00000474193 PLAC8L1A1L4L8 177 aa13.15□□□□□ -0.3
CCDC171-206ENST00000474193 MGST1P10620 155 aaKnown RBP13.15□□□□□ -0.3
CCDC171-206ENST00000474193 Q6ZQT7 251 aa13.15□□□□□ -0.3
CCDC171-206ENST00000474193 PARLQ9H300 379 aa13.15□□□□□ -0.3
CCDC171-206ENST00000474193 BIN3Q9NQY0 253 aa13.15□□□□□ -0.3
CCDC171-206ENST00000474193 ORM1P02763 201 aa13.14□□□□□ -0.31
CCDC171-206ENST00000474193 SRP19P09132 144 aaKnown RBP13.14□□□□□ -0.31
CCDC171-206ENST00000474193 PRR27Q6MZM9 219 aa13.14□□□□□ -0.31
CCDC171-206ENST00000474193 DAZAP1Q96EP5 407 aaKnown RBP13.14□□□□□ -0.31
CCDC171-206ENST00000474193 SH2D1AO60880 128 aa13.13□□□□□ -0.31
CCDC171-206ENST00000474193 TDRG1Q3Y452 100 aa13.13□□□□□ -0.31
CCDC171-206ENST00000474193 MLST8Q9BVC4 326 aa13.13□□□□□ -0.31
CCDC171-206ENST00000474193 C9JCJ5 164 aa13.12□□□□□ -0.31
CCDC171-206ENST00000474193 NUDT3O95989 172 aa13.12□□□□□ -0.31
CCDC171-206ENST00000474193 FAM3BP58499 235 aaPredicted RBP13.12□□□□□ -0.31
CCDC171-206ENST00000474193 ZNF415Q09FC8 603 aa13.12□□□□□ -0.31
CCDC171-206ENST00000474193 OR5I1Q13606 314 aa13.12□□□□□ -0.31
CCDC171-206ENST00000474193 IBA57Q5T440 356 aaKnown RBP13.12□□□□□ -0.31
CCDC171-206ENST00000474193 LINC00336Q6ZUF6 198 aa13.12□□□□□ -0.31
CCDC171-206ENST00000474193 SMIM7Q9BQ49 75 aa13.12□□□□□ -0.31
CCDC171-206ENST00000474193 TP53TG3Q9ULZ0 132 aa13.12□□□□□ -0.31
CCDC171-206ENST00000474193 GAGE12BA1L429 117 aa13.11□□□□□ -0.31
CCDC171-206ENST00000474193 ZNF727A8MUV8 499 aa13.11□□□□□ -0.31
CCDC171-206ENST00000474193 M0R2N4 97 aa13.11□□□□□ -0.31
CCDC171-206ENST00000474193 GAGE7O76087 117 aa13.11□□□□□ -0.31
CCDC171-206ENST00000474193 GAGE12FP0CL80 117 aa13.11□□□□□ -0.31
CCDC171-206ENST00000474193 GAGE12GP0CL81 117 aa13.11□□□□□ -0.31
CCDC171-206ENST00000474193 GAGE12IP0CL82 117 aa13.11□□□□□ -0.31
CCDC171-206ENST00000474193 FAM74A3Q4VXF1 159 aa13.11□□□□□ -0.31
CCDC171-206ENST00000474193 GSN-AS1Q9NRJ2 163 aa13.11□□□□□ -0.31
CCDC171-206ENST00000474193 KMT2AQ03164 3969 aa13.1□□□□□ -0.31
CCDC171-206ENST00000474193 VPS13DQ5THJ4 4388 aa13.1□□□□□ -0.31
CCDC171-206ENST00000474193 B4DEV8 164 aa13.1□□□□□ -0.31
CCDC171-206ENST00000474193 GNRH2O43555 120 aa13.1□□□□□ -0.31
CCDC171-206ENST00000474193 CRIP1P50238 77 aa13.1□□□□□ -0.31
CCDC171-206ENST00000474193 CCL18P55774 89 aa13.1□□□□□ -0.31
CCDC171-206ENST00000474193 SRSF3P84103 164 aaKnown RBP13.1□□□□□ -0.31
CCDC171-206ENST00000474193 DAZ2Q13117 558 aaKnown RBP13.1□□□□□ -0.31
CCDC171-206ENST00000474193 LGALS9BQ3B8N2 356 aa13.1□□□□□ -0.31
CCDC171-206ENST00000474193 EPPK1P58107 5090 aaKnown RBP13.09□□□□□ -0.31
CCDC171-206ENST00000474193 M0R036 132 aa13.09□□□□□ -0.31
CCDC171-206ENST00000474193 TYMSP04818 313 aa13.09□□□□□ -0.31
CCDC171-206ENST00000474193 S100A4P26447 101 aaKnown RBP13.09□□□□□ -0.31
CCDC171-206ENST00000474193 SOHLH1Q5JUK2 328 aa13.09□□□□□ -0.31
CCDC171-206ENST00000474193 TRBV20OR9-2A0A075B6H5 130 aa13.08□□□□□ -0.32
CCDC171-206ENST00000474193 TRGV2A0A075B6R0 118 aa13.08□□□□□ -0.32
CCDC171-206ENST00000474193 PGPEP1LA6NFU8 196 aa13.08□□□□□ -0.32
CCDC171-206ENST00000474193 IGLV2-8P01709 118 aa13.08□□□□□ -0.32
CCDC171-206ENST00000474193 ASIPP42127 132 aa13.08□□□□□ -0.32
CCDC171-206ENST00000474193 TCL1AP56279 114 aa13.08□□□□□ -0.32
CCDC171-206ENST00000474193 OCC1Q8TAD7 63 aa13.08□□□□□ -0.32
CCDC171-206ENST00000474193 SPXQ9BT56 116 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms