RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 DNAH6Q9C0G6 4158 aa14.23□□□□□ -0.13
SNX13-206ENST00000474067 TRAV8-1A0A0A6YYK1 113 aa14.22□□□□□ -0.13
SNX13-206ENST00000474067 EIF5AP63241 154 aaKnown RBP14.22□□□□□ -0.13
SNX13-206ENST00000474067 TCEAL7Q9BRU2 100 aa14.22□□□□□ -0.13
SNX13-206ENST00000474067 A0A096LPF7 62 aa14.21□□□□□ -0.13
SNX13-206ENST00000474067 TRAV4A0A0B4J268 109 aa14.21□□□□□ -0.13
SNX13-206ENST00000474067 IGHV3-53P01767 116 aa14.21□□□□□ -0.13
SNX13-206ENST00000474067 PFN1P07737 140 aaKnown RBP14.21□□□□□ -0.13
SNX13-206ENST00000474067 CRYBA4P53673 196 aa14.21□□□□□ -0.13
SNX13-206ENST00000474067 SH2D6Q7Z4S9 175 aa14.21□□□□□ -0.13
SNX13-206ENST00000474067 HIST1H2BAQ96A08 127 aa14.21□□□□□ -0.13
SNX13-206ENST00000474067 VSIG2Q96IQ7 327 aa14.21□□□□□ -0.13
SNX13-206ENST00000474067 GGTLC3B5MD39 225 aa14.2□□□□□ -0.14
SNX13-206ENST00000474067 C9JCJ5 164 aa14.2□□□□□ -0.14
SNX13-206ENST00000474067 GCGP01275 180 aa14.2□□□□□ -0.14
SNX13-206ENST00000474067 ESRGQ1W209 222 aa14.2□□□□□ -0.14
SNX13-206ENST00000474067 Q6ZQT7 251 aa14.2□□□□□ -0.14
SNX13-206ENST00000474067 OR4C5Q8NGB2 326 aa14.2□□□□□ -0.14
SNX13-206ENST00000474067 TXNDC17Q9BRA2 123 aa14.2□□□□□ -0.14
SNX13-206ENST00000474067 BOLA1Q9Y3E2 137 aa14.2□□□□□ -0.14
SNX13-206ENST00000474067 IGHV3-16A0A0C4DH30 117 aa14.19□□□□□ -0.14
SNX13-206ENST00000474067 A0A0D9SG52 128 aa14.19□□□□□ -0.14
SNX13-206ENST00000474067 NEGR1Q7Z3B1 354 aa14.19□□□□□ -0.14
SNX13-206ENST00000474067 PRNTQ86SH4 94 aa14.19□□□□□ -0.14
SNX13-206ENST00000474067 MUC4Q99102 2169 aa14.18□□□□□ -0.14
SNX13-206ENST00000474067 KANTRA0A1W2PQU2 76 aa14.18□□□□□ -0.14
SNX13-206ENST00000474067 HMSDA8MTL9 139 aa14.18□□□□□ -0.14
SNX13-206ENST00000474067 UMAD1C9J7I0 102 aa14.18□□□□□ -0.14
SNX13-206ENST00000474067 TYMSP04818 313 aa14.18□□□□□ -0.14
SNX13-206ENST00000474067 SRIP30626 198 aa14.18□□□□□ -0.14
SNX13-206ENST00000474067 FHL2Q14192 279 aa14.18□□□□□ -0.14
SNX13-206ENST00000474067 C8orf49Q96NF6 230 aa14.18□□□□□ -0.14
SNX13-206ENST00000474067 ARL2-SNX15V9GYD0 113 aa14.18□□□□□ -0.14
SNX13-206ENST00000474067 A0A1B0GVY2 172 aa14.17□□□□□ -0.14
SNX13-206ENST00000474067 MAP1LC3B2A6NCE7 125 aa14.17□□□□□ -0.14
SNX13-206ENST00000474067 K7EP13 123 aa14.17□□□□□ -0.14
SNX13-206ENST00000474067 KCNRGQ8N5I3 272 aa14.17□□□□□ -0.14
SNX13-206ENST00000474067 TVP23CQ96ET8 276 aa14.17□□□□□ -0.14
SNX13-206ENST00000474067 SGK494Q96LW2 274 aa14.17□□□□□ -0.14
SNX13-206ENST00000474067 MAP1LC3BQ9GZQ8 125 aa14.17□□□□□ -0.14
SNX13-206ENST00000474067 TRAV9-2A0A087WT02 112 aa14.16□□□□□ -0.14
SNX13-206ENST00000474067 PEX7O00628 323 aa14.16□□□□□ -0.14
SNX13-206ENST00000474067 GNRH2O43555 120 aa14.16□□□□□ -0.14
SNX13-206ENST00000474067 SEC11BP0C7V7 166 aa14.16□□□□□ -0.14
SNX13-206ENST00000474067 FABP5P3A8MUU1 101 aa14.15□□□□□ -0.14
SNX13-206ENST00000474067 G3V3Q6 166 aa14.15□□□□□ -0.14
SNX13-206ENST00000474067 SIVA1O15304 175 aa14.15□□□□□ -0.14
SNX13-206ENST00000474067 FHITP49789 147 aa14.15□□□□□ -0.14
SNX13-206ENST00000474067 UBE2G1P62253 170 aa14.15□□□□□ -0.14
SNX13-206ENST00000474067 ZNF726P1Q15940 193 aa14.15□□□□□ -0.14
SNX13-206ENST00000474067 DPPA3Q6W0C5 159 aa14.15□□□□□ -0.14
SNX13-206ENST00000474067 FMC1Q96HJ9 113 aa14.15□□□□□ -0.14
SNX13-206ENST00000474067 ZFP30Q9Y2G7 519 aa14.15□□□□□ -0.14
SNX13-206ENST00000474067 FAM74A7A6NL05 159 aa14.14□□□□□ -0.15
SNX13-206ENST00000474067 IGLV2-11P01706 119 aa14.14□□□□□ -0.15
SNX13-206ENST00000474067 S100A4P26447 101 aaKnown RBP14.14□□□□□ -0.15
SNX13-206ENST00000474067 UBE2G2P60604 165 aa14.14□□□□□ -0.15
SNX13-206ENST00000474067 ZNF876PQ49A33 203 aa14.14□□□□□ -0.15
SNX13-206ENST00000474067 PTH2Q96A98 100 aa14.14□□□□□ -0.15
SNX13-206ENST00000474067 ZNF479Q96JC4 524 aa14.14□□□□□ -0.15
SNX13-206ENST00000474067 FGF8P55075 233 aaPredicted RBP14.13□□□□□ -0.15
SNX13-206ENST00000474067 ZNF471Q9BX82 626 aaPredicted RBP14.13□□□□□ -0.15
SNX13-206ENST00000474067 CYTL1Q9NRR1 136 aa14.13□□□□□ -0.15
SNX13-206ENST00000474067 FRAS1Q86XX4 4008 aa14.13□□□□□ -0.15
SNX13-206ENST00000474067 PFDN1O60925 122 aa14.12□□□□□ -0.15
SNX13-206ENST00000474067 SFTA3P0C7M3 94 aa14.12□□□□□ -0.15
SNX13-206ENST00000474067 MED14OSP0DP75 135 aa14.12□□□□□ -0.15
SNX13-206ENST00000474067 GYPEP15421 78 aa14.12□□□□□ -0.15
SNX13-206ENST00000474067 PIK3CD-AS1Q5SR53 167 aa14.12□□□□□ -0.15
SNX13-206ENST00000474067 EIF5AL1Q6IS14 154 aaKnown RBP14.12□□□□□ -0.15
SNX13-206ENST00000474067 PRADC1Q9BSG0 188 aa14.12□□□□□ -0.15
SNX13-206ENST00000474067 K7EQD1 137 aa14.11□□□□□ -0.15
SNX13-206ENST00000474067 BCL2L11O43521 198 aa14.11□□□□□ -0.15
SNX13-206ENST00000474067 NXPH4O95158 308 aa14.11□□□□□ -0.15
SNX13-206ENST00000474067 S100A9P06702 114 aaKnown RBP14.11□□□□□ -0.15
SNX13-206ENST00000474067 CST9LP1Q5W188 147 aa14.11□□□□□ -0.15
SNX13-206ENST00000474067 LYPD5Q6UWN5 251 aa14.11□□□□□ -0.15
SNX13-206ENST00000474067 TPT1P13693 172 aaKnown RBP14.1□□□□□ -0.15
SNX13-206ENST00000474067 ASIPP42127 132 aa14.1□□□□□ -0.15
SNX13-206ENST00000474067 ZNF80P51504 273 aaPredicted RBP14.1□□□□□ -0.15
SNX13-206ENST00000474067 RHOHQ15669 191 aa14.1□□□□□ -0.15
SNX13-206ENST00000474067 LGALSLQ3ZCW2 172 aaPredicted RBP14.1□□□□□ -0.15
SNX13-206ENST00000474067 Q86TA4 180 aa14.1□□□□□ -0.15
SNX13-206ENST00000474067 NFE4Q86UQ8 179 aa14.1□□□□□ -0.15
SNX13-206ENST00000474067 DNAH10Q8IVF4 4471 aa14.09□□□□□ -0.15
SNX13-206ENST00000474067 SMLR1H3BR10 107 aa14.09□□□□□ -0.15
SNX13-206ENST00000474067 TEX46H3BTG2 121 aa14.09□□□□□ -0.15
SNX13-206ENST00000474067 MGST1P10620 155 aaKnown RBP14.09□□□□□ -0.15
SNX13-206ENST00000474067 C9orf85Q96MD7 179 aa14.09□□□□□ -0.15
SNX13-206ENST00000474067 LY96Q9Y6Y9 160 aa14.09□□□□□ -0.15
SNX13-206ENST00000474067 TRBV6-1A0A0K0K1D8 114 aa14.08□□□□□ -0.16
SNX13-206ENST00000474067 TRBV6-4A0A1B0GX49 114 aa14.08□□□□□ -0.16
SNX13-206ENST00000474067 A8MWV9 139 aa14.08□□□□□ -0.16
SNX13-206ENST00000474067 AKR1C3P42330 323 aa14.08□□□□□ -0.16
SNX13-206ENST00000474067 NHLRC2Q8NBF2 726 aa14.08□□□□□ -0.16
SNX13-206ENST00000474067 SYT8Q8NBV8 401 aa14.08□□□□□ -0.16
SNX13-206ENST00000474067 FAM213BQ8TBF2 198 aa14.08□□□□□ -0.16
SNX13-206ENST00000474067 SFT2D1Q8WV19 159 aa14.08□□□□□ -0.16
SNX13-206ENST00000474067 TRAV34A0A0B4J273 112 aa14.07□□□□□ -0.16
SNX13-206ENST00000474067 RS1O15537 224 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms