RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 NIT2Q9NQR4 276 aa4.65□□□□□ -1.66
CLK1-210ENST00000473565 RNF114Q9Y508 228 aa4.65□□□□□ -1.66
CLK1-210ENST00000473565 LOC102724200A0A096LPH7 203 aaPredicted RBP4.65□□□□□ -1.67
CLK1-210ENST00000473565 SMKR1H3BMG3 65 aa4.65□□□□□ -1.67
CLK1-210ENST00000473565 H3BVH4 76 aa4.65□□□□□ -1.67
CLK1-210ENST00000473565 LINC01559Q495D7 138 aa4.65□□□□□ -1.67
CLK1-210ENST00000473565 OR10AG1Q8NH19 301 aa4.65□□□□□ -1.67
CLK1-210ENST00000473565 CCL24O00175 119 aa4.65□□□□□ -1.67
CLK1-210ENST00000473565 GAS8-AS1O95177 125 aa4.65□□□□□ -1.67
CLK1-210ENST00000473565 DEFB131AP59861 70 aa4.65□□□□□ -1.67
CLK1-210ENST00000473565 KRTAP10-3P60369 221 aa4.65□□□□□ -1.67
CLK1-210ENST00000473565 Q0VG73 95 aa4.65□□□□□ -1.67
CLK1-210ENST00000473565 PMCHL1Q16048 86 aa4.65□□□□□ -1.67
CLK1-210ENST00000473565 DYNLRB2Q8TF09 96 aa4.65□□□□□ -1.67
CLK1-210ENST00000473565 BORCS7Q96B45 105 aa4.65□□□□□ -1.67
CLK1-210ENST00000473565 TRAV12-3A0A0B4J271 114 aa4.64□□□□□ -1.67
CLK1-210ENST00000473565 GNRH2O43555 120 aa4.64□□□□□ -1.67
CLK1-210ENST00000473565 NCR2O95944 276 aa4.64□□□□□ -1.67
CLK1-210ENST00000473565 SMIM6P0DI80 62 aa4.64□□□□□ -1.67
CLK1-210ENST00000473565 CTRLP40313 264 aa4.64□□□□□ -1.67
CLK1-210ENST00000473565 SNRPD3P62318 126 aaKnown RBP4.64□□□□□ -1.67
CLK1-210ENST00000473565 SPINK13Q1W4C9 94 aa4.64□□□□□ -1.67
CLK1-210ENST00000473565 ANXA2RQ3ZCQ2 193 aa4.64□□□□□ -1.67
CLK1-210ENST00000473565 CD300EQ496F6 205 aaPredicted RBP4.64□□□□□ -1.67
CLK1-210ENST00000473565 RNASEKQ6P5S7 137 aaKnown RBP4.64□□□□□ -1.67
CLK1-210ENST00000473565 FAM19A4Q96LR4 140 aa4.64□□□□□ -1.67
CLK1-210ENST00000473565 TMEM160Q9NX00 188 aa4.64□□□□□ -1.67
CLK1-210ENST00000473565 A0A0J9YX75 114 aa4.64□□□□□ -1.67
CLK1-210ENST00000473565 SCGB2A2Q13296 93 aa4.64□□□□□ -1.67
CLK1-210ENST00000473565 APRG1Q8IVJ8 170 aa4.64□□□□□ -1.67
CLK1-210ENST00000473565 TMEM18Q96B42 140 aa4.64□□□□□ -1.67
CLK1-210ENST00000473565 URB1-AS1Q96HZ7 61 aa4.64□□□□□ -1.67
CLK1-210ENST00000473565 MUC4Q99102 2169 aa4.64□□□□□ -1.67
CLK1-210ENST00000473565 SAMD10Q9BYL1 202 aa4.64□□□□□ -1.67
CLK1-210ENST00000473565 C16orf95Q9H693 158 aa4.64□□□□□ -1.67
CLK1-210ENST00000473565 PEMTQ9UBM1 199 aa4.64□□□□□ -1.67
CLK1-210ENST00000473565 PROK1P58294 105 aa4.63□□□□□ -1.67
CLK1-210ENST00000473565 RPS20P60866 119 aaKnown RBP4.63□□□□□ -1.67
CLK1-210ENST00000473565 Q6AWC8 147 aa4.63□□□□□ -1.67
CLK1-210ENST00000473565 PPP1R14DQ9NXH3 145 aa4.63□□□□□ -1.67
CLK1-210ENST00000473565 TSSC4Q9Y5U2 329 aaPredicted RBP4.63□□□□□ -1.67
CLK1-210ENST00000473565 ADARB2-AS1A8MUL3 147 aa4.63□□□□□ -1.67
CLK1-210ENST00000473565 D6R8Y8 96 aa4.63□□□□□ -1.67
CLK1-210ENST00000473565 PRM2P04554 102 aa4.63□□□□□ -1.67
CLK1-210ENST00000473565 GATA1P15976 413 aaPredicted RBP4.63□□□□□ -1.67
CLK1-210ENST00000473565 AMTP48728 403 aa4.63□□□□□ -1.67
CLK1-210ENST00000473565 FHL3Q13643 280 aa4.63□□□□□ -1.67
CLK1-210ENST00000473565 DEFB114Q30KQ6 69 aa4.63□□□□□ -1.67
CLK1-210ENST00000473565 OR10J3Q5JRS4 329 aa4.63□□□□□ -1.67
CLK1-210ENST00000473565 EBLN2Q6P2I7 272 aa4.63□□□□□ -1.67
CLK1-210ENST00000473565 Q6ZWC4 215 aa4.63□□□□□ -1.67
CLK1-210ENST00000473565 KCNS1Q96KK3 526 aa4.63□□□□□ -1.67
CLK1-210ENST00000473565 NBEAL2Q6ZNJ1 2754 aa4.63□□□□□ -1.67
CLK1-210ENST00000473565 TRAV21A0A0B4J279 112 aa4.63□□□□□ -1.67
CLK1-210ENST00000473565 LOC389332A0A1B0GUA5 103 aa4.63□□□□□ -1.67
CLK1-210ENST00000473565 M0R381 172 aa4.63□□□□□ -1.67
CLK1-210ENST00000473565 EVI2AP22794 236 aa4.63□□□□□ -1.67
CLK1-210ENST00000473565 PAFAH1B2P68402 229 aa4.63□□□□□ -1.67
CLK1-210ENST00000473565 MRPL51Q4U2R6 128 aaKnown RBP4.63□□□□□ -1.67
CLK1-210ENST00000473565 NIT1Q86X76 327 aa4.63□□□□□ -1.67
CLK1-210ENST00000473565 LENEPQ9Y5L5 61 aa4.63□□□□□ -1.67
CLK1-210ENST00000473565 STAB1Q9NY15 2570 aa4.62□□□□□ -1.67
CLK1-210ENST00000473565 RBMY1BA6NDE4 496 aaKnown RBP4.62□□□□□ -1.67
CLK1-210ENST00000473565 RBMY1EA6NEQ0 496 aaKnown RBP4.62□□□□□ -1.67
CLK1-210ENST00000473565 CYSRT1A8MQ03 144 aa4.62□□□□□ -1.67
CLK1-210ENST00000473565 KLLNB2CW77 178 aa4.62□□□□□ -1.67
CLK1-210ENST00000473565 RBMY1DP0C7P1 496 aaKnown RBP4.62□□□□□ -1.67
CLK1-210ENST00000473565 FAM104BQ5XKR9 115 aa4.62□□□□□ -1.67
CLK1-210ENST00000473565 MAST4O15021 2626 aa4.62□□□□□ -1.67
CLK1-210ENST00000473565 TCF21O43680 179 aa4.62□□□□□ -1.67
CLK1-210ENST00000473565 S100A4P26447 101 aaKnown RBP4.62□□□□□ -1.67
CLK1-210ENST00000473565 TRAV26-2A0A0B4J265 109 aa4.61□□□□□ -1.67
CLK1-210ENST00000473565 ZNF324O75467 553 aaPredicted RBP4.61□□□□□ -1.67
CLK1-210ENST00000473565 HSBP1O75506 76 aa4.61□□□□□ -1.67
CLK1-210ENST00000473565 RBMY1A1P0DJD3 496 aaKnown RBP4.61□□□□□ -1.67
CLK1-210ENST00000473565 RBMY1CP0DJD4 496 aa4.61□□□□□ -1.67
CLK1-210ENST00000473565 ESDP10768 282 aa4.61□□□□□ -1.67
CLK1-210ENST00000473565 HTN1P15515 57 aa4.61□□□□□ -1.67
CLK1-210ENST00000473565 RBMY1FQ15415 496 aaKnown RBP4.61□□□□□ -1.67
CLK1-210ENST00000473565 SPANXN1Q5VSR9 72 aa4.61□□□□□ -1.67
CLK1-210ENST00000473565 ZNF493Q6ZR52 646 aa4.61□□□□□ -1.67
CLK1-210ENST00000473565 SPATA3Q8NHX4 192 aa4.61□□□□□ -1.67
CLK1-210ENST00000473565 RNF185Q96GF1 192 aa4.61□□□□□ -1.67
CLK1-210ENST00000473565 MAP6D1Q9H9H5 199 aa4.61□□□□□ -1.67
CLK1-210ENST00000473565 C7orf71A4D174 169 aa4.61□□□□□ -1.67
CLK1-210ENST00000473565 SAP30O75446 220 aa4.61□□□□□ -1.67
CLK1-210ENST00000473565 NDUFA7O95182 113 aa4.61□□□□□ -1.67
CLK1-210ENST00000473565 SCGB1D1O95968 90 aa4.61□□□□□ -1.67
CLK1-210ENST00000473565 NPYP01303 97 aa4.61□□□□□ -1.67
CLK1-210ENST00000473565 RNASE3P12724 160 aaKnown RBP4.61□□□□□ -1.67
CLK1-210ENST00000473565 KRTDAPP60985 99 aa4.61□□□□□ -1.67
CLK1-210ENST00000473565 JOSD1Q15040 202 aaPredicted RBP4.61□□□□□ -1.67
CLK1-210ENST00000473565 AMTNQ6UX39 209 aa4.61□□□□□ -1.67
CLK1-210ENST00000473565 LINC00173Q6ZV60 143 aa4.61□□□□□ -1.67
CLK1-210ENST00000473565 GATD1Q8NB37 220 aa4.61□□□□□ -1.67
CLK1-210ENST00000473565 WFDC10AQ9H1F0 79 aa4.61□□□□□ -1.67
CLK1-210ENST00000473565 ZNF256Q9Y2P7 627 aaPredicted RBP4.61□□□□□ -1.67
CLK1-210ENST00000473565 FBN1P35555 2871 aaKnown RBP4.61□□□□□ -1.67
CLK1-210ENST00000473565 A0A1B0GW15 77 aa4.61□□□□□ -1.67
CLK1-210ENST00000473565 CD7P09564 240 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms