RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 COX6B1P14854 86 aa11.37□□□□□ -0.59
UBXN11-213ENST00000472155 HINT1P49773 126 aaPredicted RBP11.37□□□□□ -0.59
UBXN11-213ENST00000472155 ZFAND2AQ8N6M9 145 aa11.37□□□□□ -0.59
UBXN11-213ENST00000472155 H3BVH4 76 aa11.37□□□□□ -0.59
UBXN11-213ENST00000472155 HIST1H1AQ02539 215 aaPredicted RBP11.37□□□□□ -0.59
UBXN11-213ENST00000472155 C9orf139Q6ZV77 190 aa11.37□□□□□ -0.59
UBXN11-213ENST00000472155 SRSF2Q01130 221 aaKnown RBP11.36□□□□□ -0.59
UBXN11-213ENST00000472155 MRPL53Q96EL3 112 aaKnown RBP11.36□□□□□ -0.59
UBXN11-213ENST00000472155 LAMTOR2Q9Y2Q5 125 aa11.36□□□□□ -0.59
UBXN11-213ENST00000472155 GOLT1BQ9Y3E0 138 aa11.36□□□□□ -0.59
UBXN11-213ENST00000472155 M0QZK8 103 aa11.36□□□□□ -0.59
UBXN11-213ENST00000472155 RPLP1P05386 114 aaKnown RBP11.36□□□□□ -0.59
UBXN11-213ENST00000472155 KLHDC1Q8N7A1 406 aa11.36□□□□□ -0.59
UBXN11-213ENST00000472155 HSPB8Q9UJY1 196 aa11.36□□□□□ -0.59
UBXN11-213ENST00000472155 ITPR2Q14571 2701 aa11.35□□□□□ -0.59
UBXN11-213ENST00000472155 DLEU1O43261 78 aa11.35□□□□□ -0.59
UBXN11-213ENST00000472155 PSMB8P28062 276 aa11.35□□□□□ -0.59
UBXN11-213ENST00000472155 ATP6V0BQ99437 205 aa11.35□□□□□ -0.59
UBXN11-213ENST00000472155 UFC1Q9Y3C8 167 aa11.35□□□□□ -0.59
UBXN11-213ENST00000472155 SNAI2O43623 268 aa11.35□□□□□ -0.59
UBXN11-213ENST00000472155 SLC25A16P16260 332 aa11.35□□□□□ -0.59
UBXN11-213ENST00000472155 LINC01545Q5VT33 79 aa11.35□□□□□ -0.59
UBXN11-213ENST00000472155 C18orf15Q96N68 181 aa11.35□□□□□ -0.59
UBXN11-213ENST00000472155 BEX4Q9NWD9 120 aaPredicted RBP11.35□□□□□ -0.59
UBXN11-213ENST00000472155 H3BUA1 57 aa11.34□□□□□ -0.59
UBXN11-213ENST00000472155 TNFRSF6BO95407 300 aa11.34□□□□□ -0.59
UBXN11-213ENST00000472155 PET117Q6UWS5 81 aa11.34□□□□□ -0.59
UBXN11-213ENST00000472155 PEF1Q9UBV8 284 aaKnown RBP11.34□□□□□ -0.59
UBXN11-213ENST00000472155 MUC4Q99102 2169 aa11.34□□□□□ -0.59
UBXN11-213ENST00000472155 DMRTA1Q5VZB9 504 aa11.34□□□□□ -0.59
UBXN11-213ENST00000472155 DAZ1Q9NQZ3 744 aaKnown RBP11.34□□□□□ -0.59
UBXN11-213ENST00000472155 RNASE4P34096 147 aaKnown RBP11.33□□□□□ -0.6
UBXN11-213ENST00000472155 HIST2H2BCQ6DN03 193 aa11.33□□□□□ -0.6
UBXN11-213ENST00000472155 GNRH2O43555 120 aa11.33□□□□□ -0.6
UBXN11-213ENST00000472155 TCF21O43680 179 aa11.33□□□□□ -0.6
UBXN11-213ENST00000472155 BRI3O95415 125 aa11.33□□□□□ -0.6
UBXN11-213ENST00000472155 IGHV4-31P0DP07 118 aa11.33□□□□□ -0.6
UBXN11-213ENST00000472155 DSCR9P59020 149 aa11.33□□□□□ -0.6
UBXN11-213ENST00000472155 SMPXQ9UHP9 88 aa11.33□□□□□ -0.6
UBXN11-213ENST00000472155 A0A0G2JLM5 398 aa11.32□□□□□ -0.6
UBXN11-213ENST00000472155 CACNG7P62955 275 aa11.32□□□□□ -0.6
UBXN11-213ENST00000472155 OR10J6PQ8NGY7 276 aa11.32□□□□□ -0.6
UBXN11-213ENST00000472155 PPP1R14DQ9NXH3 145 aa11.32□□□□□ -0.6
UBXN11-213ENST00000472155 MTORP42345 2549 aa11.32□□□□□ -0.6
UBXN11-213ENST00000472155 GATA3P23771 443 aa11.32□□□□□ -0.6
UBXN11-213ENST00000472155 ANXA2RQ3ZCQ2 193 aa11.32□□□□□ -0.6
UBXN11-213ENST00000472155 C20orf202A1L168 122 aa11.31□□□□□ -0.6
UBXN11-213ENST00000472155 M0R381 172 aa11.31□□□□□ -0.6
UBXN11-213ENST00000472155 SPANXN1Q5VSR9 72 aa11.31□□□□□ -0.6
UBXN11-213ENST00000472155 C18orf65Q6ZTR6 163 aa11.31□□□□□ -0.6
UBXN11-213ENST00000472155 HELZ2Q9BYK8 2649 aaKnown RBP11.31□□□□□ -0.6
UBXN11-213ENST00000472155 HBDP02042 147 aa11.31□□□□□ -0.6
UBXN11-213ENST00000472155 PCP4P48539 62 aa11.31□□□□□ -0.6
UBXN11-213ENST00000472155 SCRT2Q9NQ03 307 aa11.31□□□□□ -0.6
UBXN11-213ENST00000472155 HOXA3O43365 443 aaPredicted RBP11.3□□□□□ -0.6
UBXN11-213ENST00000472155 ANKRD39Q53RE8 183 aa11.3□□□□□ -0.6
UBXN11-213ENST00000472155 DCANP1Q8TF63 244 aa11.3□□□□□ -0.6
UBXN11-213ENST00000472155 LINC00477Q96M19 166 aa11.3□□□□□ -0.6
UBXN11-213ENST00000472155 WNK1Q9H4A3 2382 aa11.3□□□□□ -0.6
UBXN11-213ENST00000472155 IGKV3-20P01619 116 aa11.3□□□□□ -0.6
UBXN11-213ENST00000472155 LEPP41159 167 aa11.3□□□□□ -0.6
UBXN11-213ENST00000472155 ST20Q9HBF5 79 aa11.3□□□□□ -0.6
UBXN11-213ENST00000472155 DKK2Q9UBU2 259 aa11.3□□□□□ -0.6
UBXN11-213ENST00000472155 Q5PR19 223 aa11.29□□□□□ -0.6
UBXN11-213ENST00000472155 NRACQ8N912 160 aa11.29□□□□□ -0.6
UBXN11-213ENST00000472155 FAM19A4Q96LR4 140 aa11.29□□□□□ -0.6
UBXN11-213ENST00000472155 MAP1LC3AQ9H492 121 aa11.29□□□□□ -0.6
UBXN11-213ENST00000472155 OVOL1O14753 267 aa11.29□□□□□ -0.6
UBXN11-213ENST00000472155 ZNF688P0C7X2 276 aa11.29□□□□□ -0.6
UBXN11-213ENST00000472155 SYNJ2BPP57105 145 aa11.29□□□□□ -0.6
UBXN11-213ENST00000472155 MPV17L2Q567V2 206 aa11.29□□□□□ -0.6
UBXN11-213ENST00000472155 DEFB104AQ8WTQ1 72 aa11.29□□□□□ -0.6
UBXN11-213ENST00000472155 MRPS16Q9Y3D3 137 aaKnown RBP11.29□□□□□ -0.6
UBXN11-213ENST00000472155 IGLV2-18A0A075B6J9 118 aa11.28□□□□□ -0.6
UBXN11-213ENST00000472155 DEFB136Q30KP8 78 aa11.28□□□□□ -0.6
UBXN11-213ENST00000472155 ERASQ7Z444 233 aa11.28□□□□□ -0.6
UBXN11-213ENST00000472155 MRPL52Q86TS9 123 aaKnown RBP11.28□□□□□ -0.6
UBXN11-213ENST00000472155 OR2K2Q8NGT1 345 aa11.28□□□□□ -0.6
UBXN11-213ENST00000472155 CBY1Q9Y3M2 126 aa11.28□□□□□ -0.6
UBXN11-213ENST00000472155 COL5A1-AS1Q5SY13 56 aa11.28□□□□□ -0.6
UBXN11-213ENST00000472155 IFI27L1Q96BM0 104 aa11.28□□□□□ -0.6
UBXN11-213ENST00000472155 ZNF702PQ9H963 129 aa11.28□□□□□ -0.6
UBXN11-213ENST00000472155 IGHV4OR15-8A0A075B7B6 117 aa11.27□□□□□ -0.6
UBXN11-213ENST00000472155 A0A087WW49 117 aa11.27□□□□□ -0.6
UBXN11-213ENST00000472155 FSHBP01225 129 aa11.27□□□□□ -0.6
UBXN11-213ENST00000472155 C14orf178Q8N769 122 aaPredicted RBP11.27□□□□□ -0.6
UBXN11-213ENST00000472155 Q96MF0 132 aa11.27□□□□□ -0.6
UBXN11-213ENST00000472155 VPREB3Q9UKI3 123 aa11.27□□□□□ -0.6
UBXN11-213ENST00000472155 TMEM158Q8WZ71 300 aa11.27□□□□□ -0.61
UBXN11-213ENST00000472155 MS4A6AQ9H2W1 248 aa11.27□□□□□ -0.61
UBXN11-213ENST00000472155 TRAV21A0A0B4J279 112 aa11.26□□□□□ -0.61
UBXN11-213ENST00000472155 HSBP1L1C9JCN9 74 aa11.26□□□□□ -0.61
UBXN11-213ENST00000472155 RNASE3P12724 160 aaKnown RBP11.26□□□□□ -0.61
UBXN11-213ENST00000472155 SLC25A34Q6PIV7 304 aa11.26□□□□□ -0.61
UBXN11-213ENST00000472155 DUX3Q96PT4 197 aa11.26□□□□□ -0.61
UBXN11-213ENST00000472155 JPT2Q9H910 190 aa11.26□□□□□ -0.61
UBXN11-213ENST00000472155 PDZD2O15018 2839 aa11.26□□□□□ -0.61
UBXN11-213ENST00000472155 TRAV12-2A0A075B6T6 113 aa11.26□□□□□ -0.61
UBXN11-213ENST00000472155 PPBPP02775 128 aa11.26□□□□□ -0.61
UBXN11-213ENST00000472155 S100A4P26447 101 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms