RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 AZU1P20160 251 aa13.9□□□□□ -0.18
PSPC1-203ENST00000471658 FAM159AQ6UWV7 190 aa13.9□□□□□ -0.18
PSPC1-203ENST00000471658 ZNF705AQ6ZN79 300 aaPredicted RBP13.9□□□□□ -0.18
PSPC1-203ENST00000471658 FAM231DQ6ZW35 169 aa13.9□□□□□ -0.18
PSPC1-203ENST00000471658 CLRN3Q8NCR9 226 aa13.9□□□□□ -0.18
PSPC1-203ENST00000471658 RCHY1Q96PM5 261 aa13.9□□□□□ -0.18
PSPC1-203ENST00000471658 OSTCQ9NRP0 149 aa13.9□□□□□ -0.18
PSPC1-203ENST00000471658 MEGF8Q7Z7M0 2845 aa13.9□□□□□ -0.18
PSPC1-203ENST00000471658 B4DEV8 164 aa13.9□□□□□ -0.19
PSPC1-203ENST00000471658 GATCO43716 136 aaKnown RBP13.9□□□□□ -0.19
PSPC1-203ENST00000471658 RNF212Q495C1 297 aa13.9□□□□□ -0.19
PSPC1-203ENST00000471658 Q6ZWC4 215 aa13.9□□□□□ -0.19
PSPC1-203ENST00000471658 OR2D3Q8NGH3 330 aa13.9□□□□□ -0.19
PSPC1-203ENST00000471658 OR10G8Q8NGN5 311 aa13.9□□□□□ -0.19
PSPC1-203ENST00000471658 RNF183Q96D59 192 aa13.9□□□□□ -0.19
PSPC1-203ENST00000471658 TMEM189A5PLL7 270 aa13.89□□□□□ -0.19
PSPC1-203ENST00000471658 GZMBP10144 247 aa13.89□□□□□ -0.19
PSPC1-203ENST00000471658 LINC01559Q495D7 138 aa13.89□□□□□ -0.19
PSPC1-203ENST00000471658 TMEM256Q8N2U0 113 aa13.89□□□□□ -0.19
PSPC1-203ENST00000471658 PYGO2Q9BRQ0 406 aa13.89□□□□□ -0.19
PSPC1-203ENST00000471658 V9GYV3 84 aa13.89□□□□□ -0.19
PSPC1-203ENST00000471658 X6R8D5 127 aa13.89□□□□□ -0.19
PSPC1-203ENST00000471658 OVOL2Q9BRP0 275 aa13.88□□□□□ -0.19
PSPC1-203ENST00000471658 RPP21Q9H633 154 aaKnown RBP13.88□□□□□ -0.19
PSPC1-203ENST00000471658 DNAH9Q9NYC9 4486 aa13.88□□□□□ -0.19
PSPC1-203ENST00000471658 CBY3A6NI87 242 aa13.87□□□□□ -0.19
PSPC1-203ENST00000471658 SPRY2O43597 315 aa13.87□□□□□ -0.19
PSPC1-203ENST00000471658 TYMSP04818 313 aa13.87□□□□□ -0.19
PSPC1-203ENST00000471658 ATRAIDQ6UW56 229 aa13.87□□□□□ -0.19
PSPC1-203ENST00000471658 C15orf54Q8N8G6 183 aa13.87□□□□□ -0.19
PSPC1-203ENST00000471658 OR11H2Q8NH07 326 aa13.87□□□□□ -0.19
PSPC1-203ENST00000471658 C7orf77A4D0Y5 90 aa13.86□□□□□ -0.19
PSPC1-203ENST00000471658 TDRG1Q3Y452 100 aa13.86□□□□□ -0.19
PSPC1-203ENST00000471658 SVBPQ8N300 66 aa13.86□□□□□ -0.19
PSPC1-203ENST00000471658 MDFICQ9P1T7 246 aa13.86□□□□□ -0.19
PSPC1-203ENST00000471658 LINC00467Q9BRT7 94 aa13.86□□□□□ -0.19
PSPC1-203ENST00000471658 MT-ND4LP03901 98 aa13.85□□□□□ -0.19
PSPC1-203ENST00000471658 KCNS1Q96KK3 526 aa13.85□□□□□ -0.19
PSPC1-203ENST00000471658 HUWE1Q7Z6Z7 4374 aaKnown RBP13.85□□□□□ -0.19
PSPC1-203ENST00000471658 IGHV3-16A0A0C4DH30 117 aa13.83□□□□□ -0.2
PSPC1-203ENST00000471658 SNAPINO95295 136 aa13.83□□□□□ -0.2
PSPC1-203ENST00000471658 RRN3P1Q2M238 152 aa13.83□□□□□ -0.2
PSPC1-203ENST00000471658 TM2D3Q9BRN9 247 aa13.83□□□□□ -0.2
PSPC1-203ENST00000471658 RPS10P5Q9NQ39 176 aa13.83□□□□□ -0.2
PSPC1-203ENST00000471658 DEFB4AO15263 64 aa13.82□□□□□ -0.2
PSPC1-203ENST00000471658 TCL1AP56279 114 aa13.82□□□□□ -0.2
PSPC1-203ENST00000471658 NEU1Q99519 415 aa13.82□□□□□ -0.2
PSPC1-203ENST00000471658 B9D2Q9BPU9 175 aa13.82□□□□□ -0.2
PSPC1-203ENST00000471658 GSN-AS1Q9NRJ2 163 aa13.82□□□□□ -0.2
PSPC1-203ENST00000471658 TP53TG1Q9Y2A0 90 aa13.82□□□□□ -0.2
PSPC1-203ENST00000471658 TIMM8BQ9Y5J9 83 aaPredicted RBP13.82□□□□□ -0.2
PSPC1-203ENST00000471658 RNASE3P12724 160 aaKnown RBP13.82□□□□□ -0.2
PSPC1-203ENST00000471658 RHEBQ15382 184 aa13.82□□□□□ -0.2
PSPC1-203ENST00000471658 C11orf72Q8NBR9 251 aa13.82□□□□□ -0.2
PSPC1-203ENST00000471658 RNASE8Q8TDE3 154 aaKnown RBP13.82□□□□□ -0.2
PSPC1-203ENST00000471658 GTSF1Q8WW33 167 aa13.82□□□□□ -0.2
PSPC1-203ENST00000471658 ANAPC16Q96DE5 110 aa13.82□□□□□ -0.2
PSPC1-203ENST00000471658 PRKDCP78527 4128 aaKnown RBP13.81□□□□□ -0.2
PSPC1-203ENST00000471658 TRGV11A0A075B6L2 103 aa13.81□□□□□ -0.2
PSPC1-203ENST00000471658 MUC21A0A0G2JKD1 596 aa13.81□□□□□ -0.2
PSPC1-203ENST00000471658 MUC21A0A140T8X8 626 aa13.81□□□□□ -0.2
PSPC1-203ENST00000471658 A8MWL6 223 aa13.81□□□□□ -0.2
PSPC1-203ENST00000471658 H3BVH4 76 aa13.81□□□□□ -0.2
PSPC1-203ENST00000471658 PPP1R2P9O14990 202 aa13.81□□□□□ -0.2
PSPC1-203ENST00000471658 ARMS2P0C7Q2 107 aa13.81□□□□□ -0.2
PSPC1-203ENST00000471658 ASIPP42127 132 aa13.81□□□□□ -0.2
PSPC1-203ENST00000471658 RPS20P60866 119 aaKnown RBP13.81□□□□□ -0.2
PSPC1-203ENST00000471658 CT83Q5H943 113 aa13.81□□□□□ -0.2
PSPC1-203ENST00000471658 IGHV4-28A0A0C4DH34 117 aa13.8□□□□□ -0.2
PSPC1-203ENST00000471658 PLAC8L1A1L4L8 177 aa13.8□□□□□ -0.2
PSPC1-203ENST00000471658 S100A4P26447 101 aaKnown RBP13.8□□□□□ -0.2
PSPC1-203ENST00000471658 EMP1P54849 157 aa13.8□□□□□ -0.2
PSPC1-203ENST00000471658 TSKUQ8WUA8 353 aa13.8□□□□□ -0.2
PSPC1-203ENST00000471658 SPATA25Q9BR10 227 aa13.8□□□□□ -0.2
PSPC1-203ENST00000471658 TPPP3Q9BW30 176 aa13.8□□□□□ -0.2
PSPC1-203ENST00000471658 SMIM9A6NGZ8 99 aa13.79□□□□□ -0.2
PSPC1-203ENST00000471658 IGLC6P0CF74 106 aa13.79□□□□□ -0.2
PSPC1-203ENST00000471658 Q8NAQ8 132 aa13.79□□□□□ -0.2
PSPC1-203ENST00000471658 TMEM263Q8WUH6 116 aaKnown RBP13.79□□□□□ -0.2
PSPC1-203ENST00000471658 XKRY2A2RUG3 117 aa13.79□□□□□ -0.2
PSPC1-203ENST00000471658 CXCL1P09341 107 aa13.79□□□□□ -0.2
PSPC1-203ENST00000471658 S100A1P23297 94 aa13.79□□□□□ -0.2
PSPC1-203ENST00000471658 SSTP61278 116 aa13.79□□□□□ -0.2
PSPC1-203ENST00000471658 DNLZQ5SXM8 178 aa13.79□□□□□ -0.2
PSPC1-203ENST00000471658 CTDSP1Q9GZU7 261 aa13.79□□□□□ -0.2
PSPC1-203ENST00000471658 IL36BQ9NZH7 164 aa13.79□□□□□ -0.2
PSPC1-203ENST00000471658 A0A087WWC5 75 aa13.78□□□□□ -0.2
PSPC1-203ENST00000471658 SMIM27A0A1W2PRY6 76 aa13.78□□□□□ -0.2
PSPC1-203ENST00000471658 ZNF415Q09FC8 603 aa13.78□□□□□ -0.2
PSPC1-203ENST00000471658 LYZL1Q6UWQ5 148 aa13.78□□□□□ -0.2
PSPC1-203ENST00000471658 FER1L6-AS1Q8NA97 138 aa13.78□□□□□ -0.2
PSPC1-203ENST00000471658 C16orf74Q96GX8 76 aa13.78□□□□□ -0.2
PSPC1-203ENST00000471658 PGLYRP4Q96LB8 373 aa13.78□□□□□ -0.2
PSPC1-203ENST00000471658 C9orf85Q96MD7 179 aa13.78□□□□□ -0.2
PSPC1-203ENST00000471658 MIFP14174 115 aa13.77□□□□□ -0.21
PSPC1-203ENST00000471658 FAM3BP58499 235 aaPredicted RBP13.77□□□□□ -0.21
PSPC1-203ENST00000471658 ZNF493Q6ZR52 646 aa13.77□□□□□ -0.21
PSPC1-203ENST00000471658 TENM3Q9P273 2699 aa13.77□□□□□ -0.21
PSPC1-203ENST00000471658 HIGD1CA8MV81 97 aa13.76□□□□□ -0.21
PSPC1-203ENST00000471658 IL17DQ8TAD2 202 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 178.8 ms